EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSTRUG00000003612 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: SMG7%2C nonsense mediated mRNA decay factor
Gene Type: protein_coding
Species: Takifugu_rubripes
Status: putative
Strand: Plus strand
Length: 1840 bases
Position: chrHE593394.1:8060-9899
Accession: 105419912
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTRUP00000008466	EST1	PF10374.9	7.2e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTRUT00000008517	-	549	XM_011621669	ENSTRUP00000008466	183 (aa)	XP_011619971	H2S7U4

Gene Model

Click here to download ENSTRUG00000003612's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTRUG00000003612's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTRUG00000003612	-	92	83.529	ENSG00000116698	SMG7	92	83.529	Homo_sapiens
ENSTRUG00000003612	-	95	82.857	ENSANAG00000028114	SMG7	95	82.857	Aotus_nancymaae
ENSTRUG00000003612	-	95	83.333	ENSCJAG00000005135	SMG7	95	83.333	Callithrix_jacchus
ENSTRUG00000003612	-	96	81.818	ENSCAFG00020015475	SMG7	95	81.818	Canis_lupus_dingo
ENSTRUG00000003612	-	95	82.857	ENSTSYG00000002667	SMG7	90	82.857	Carlito_syrichta
ENSTRUG00000003612	-	95	82.857	ENSCCAG00000028596	SMG7	95	82.857	Cebus_capucinus
ENSTRUG00000003612	-	93	83.721	ENSCATG00000011063	SMG7	95	82.857	Cercocebus_atys
ENSTRUG00000003612	-	86	51.534	ENSCING00000006953	-	50	51.534	Ciona_intestinalis
ENSTRUG00000003612	-	93	83.721	ENSCANG00000015680	SMG7	95	82.857	Colobus_angolensis_palliatus
ENSTRUG00000003612	-	90	88.415	ENSCSEG00000007392	-	92	88.415	Cynoglossus_semilaevis
ENSTRUG00000003612	-	90	90.244	ENSGAFG00000019000	smg7	58	90.244	Gambusia_affinis
ENSTRUG00000003612	-	88	85.976	ENSGAGG00000024208	-	87	85.976	Gopherus_agassizii
ENSTRUG00000003612	-	97	82.022	ENSGGOG00000002342	SMG7	91	82.022	Gorilla_gorilla
ENSTRUG00000003612	-	85	89.744	ENSHCOG00000012804	-	83	89.744	Hippocampus_comes
ENSTRUG00000003612	-	92	71.006	ENSJJAG00000000309	-	95	71.006	Jaculus_jaculus
ENSTRUG00000003612	-	93	83.721	ENSMFAG00000031653	SMG7	95	82.857	Macaca_fascicularis
ENSTRUG00000003612	-	93	83.721	ENSMNEG00000034798	SMG7	95	82.857	Macaca_nemestrina
ENSTRUG00000003612	-	95	83.429	ENSMICG00000007145	SMG7	91	83.429	Microcebus_murinus
ENSTRUG00000003612	-	91	87.952	ENSORLG00000007314	smg7	81	84.091	Oryzias_latipes
ENSTRUG00000003612	-	91	87.952	ENSORLG00020015779	smg7	80	84.091	Oryzias_latipes_hni
ENSTRUG00000003612	-	95	82.857	ENSPPAG00000031619	SMG7	95	82.857	Pan_paniscus
ENSTRUG00000003612	-	95	82.857	ENSPTRG00000001764	SMG7	95	82.857	Pan_troglodytes
ENSTRUG00000003612	-	91	81.928	ENSPMGG00000002179	-	89	81.928	Periophthalmus_magnuspinnatus
ENSTRUG00000003612	-	84	88.889	ENSPCIG00000003786	SMG7	84	88.889	Phascolarctos_cinereus
ENSTRUG00000003612	-	95	82.759	ENSPCOG00000011996	SMG7	85	82.759	Propithecus_coquereli
ENSTRUG00000003612	-	92	83.529	ENSSBOG00000023454	SMG7	92	83.529	Saimiri_boliviensis_boliviensis
ENSTRUG00000003612	-	91	87.952	ENSSLDG00000003750	-	96	87.952	Seriola_lalandi_dorsalis