EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSTRUG00000003616 (Gene tree)
Gene ID
101074412
Gene Symbol
rpa1
Alias
wu:fi14b08|zgc:55337|zgc:77092
Full Name
replication protein A 70 kDa DNA-binding subunit-like
Gene Type
protein_coding
Species
Takifugu_rubripes
Status
putative
Strand
Minus strand
Length
15304 bases
Position
chr11:6525427-6540730
Accession
101074412
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSTRUP00000008475tRNA_anti-codonPF01336.251.1e-1011
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSTRUT00000008526-2610XM_003968518ENSTRUP00000008475600 (aa)XP_003968567H2S7V3
Gene Model
Click here to download ENSTRUG00000003616's gene model file
Pathways
Pathway IDPathway NameSource
tru03030DNA replicationKEGG
tru03420Nucleotide excision repairKEGG
tru03430Mismatch repairKEGG
tru03440Homologous recombinationKEGG
tru03460Fanconi anemia pathwayKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSTRUG00000003616's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSTRUG00000003616rpa19961.133ENSTRUG00000000405RPA18268.636
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSTRUG00000003616rpa110081.667ENSAPOG00000011658rpa110081.667Acanthochromis_polyacanthus
ENSTRUG00000003616rpa19268.109ENSAPOG00000019409RPA18467.800Acanthochromis_polyacanthus
ENSTRUG00000003616rpa19962.684ENSAMEG00000007706RPA19962.684Ailuropoda_melanoleuca
ENSTRUG00000003616rpa19561.840ENSACIG00000012881RPA19961.840Amphilophus_citrinellus
ENSTRUG00000003616rpa19675.044ENSACIG00000007277rpa19975.044Amphilophus_citrinellus
ENSTRUG00000003616rpa110083.000ENSAOCG00000023376rpa110083.000Amphiprion_ocellaris
ENSTRUG00000003616rpa19957.298ENSAOCG00000009003RPA19957.453Amphiprion_ocellaris
ENSTRUG00000003616rpa110083.000ENSAPEG00000008634rpa110083.000Amphiprion_percula
ENSTRUG00000003616rpa19268.864ENSAPEG00000019132RPA19956.297Amphiprion_percula
ENSTRUG00000003616rpa19958.669ENSATEG00000006443RPA19958.669Anabas_testudineus
ENSTRUG00000003616rpa19582.456ENSATEG00000022024rpa110082.456Anabas_testudineus
ENSTRUG00000003616rpa19754.383ENSAPLG00000012442RPA19954.383Anas_platyrhynchos
ENSTRUG00000003616rpa19957.521ENSACAG00000014490RPA19857.877Anolis_carolinensis
ENSTRUG00000003616rpa19664.187ENSANAG00000023456RPA19864.187Aotus_nancymaae
ENSTRUG00000003616rpa19961.417ENSACLG00000005223RPA19961.417Astatotilapia_calliptera
ENSTRUG00000003616rpa19382.826ENSACLG00000006640rpa19982.826Astatotilapia_calliptera
ENSTRUG00000003616rpa19974.333ENSAMXG00000008418rpa110073.702Astyanax_mexicanus
ENSTRUG00000003616rpa19963.322ENSBTAG00000009711RPA19963.322Bos_taurus
ENSTRUG00000003616rpa17234.096WBGene00017546rpa-16534.096Caenorhabditis_elegans
ENSTRUG00000003616rpa19962.295ENSCJAG00000001848RPA19962.295Callithrix_jacchus
ENSTRUG00000003616rpa19964.145ENSCAFG00000019249RPA19964.803Canis_familiaris
ENSTRUG00000003616rpa19964.145ENSCAFG00020009847RPA19964.803Canis_lupus_dingo
ENSTRUG00000003616rpa19963.322ENSCHIG00000026308RPA19963.651Capra_hircus
ENSTRUG00000003616rpa19963.054ENSTSYG00000003482-9963.054Carlito_syrichta
ENSTRUG00000003616rpa19963.322ENSCPOG00000000035RPA19963.322Cavia_porcellus
ENSTRUG00000003616rpa19952.951ENSCCAG00000010981RPA19952.951Cebus_capucinus
ENSTRUG00000003616rpa19960.132ENSCLAG00000015045-9960.132Chinchilla_lanigera
ENSTRUG00000003616rpa19963.816ENSCLAG00000005185-9963.816Chinchilla_lanigera
ENSTRUG00000003616rpa19953.289ENSCSAG00000013833RPA19953.289Chlorocebus_sabaeus
ENSTRUG00000003616rpa17370.709ENSCHOG00000009454-9970.709Choloepus_hoffmanni
ENSTRUG00000003616rpa19663.032ENSCHOG00000013540-9963.032Choloepus_hoffmanni
ENSTRUG00000003616rpa19964.918ENSCPBG00000020377RPA19965.789Chrysemys_picta_bellii
ENSTRUG00000003616rpa19943.586ENSCING00000023482-9943.586Ciona_intestinalis
ENSTRUG00000003616rpa19863.435ENSCANG00000030911RPA19963.435Colobus_angolensis_palliatus
ENSTRUG00000003616rpa19962.541ENSCGRG00001008197Rpa19962.806Cricetulus_griseus_chok1gshd
ENSTRUG00000003616rpa18164.300ENSCGRG00000000582Rpa19964.625Cricetulus_griseus_crigri
ENSTRUG00000003616rpa110076.606ENSCSEG00000013066rpa110076.606Cynoglossus_semilaevis
ENSTRUG00000003616rpa19955.305ENSCSEG00000012726RPA19856.432Cynoglossus_semilaevis
ENSTRUG00000003616rpa19556.765ENSCVAG00000013446-9656.765Cyprinodon_variegatus
ENSTRUG00000003616rpa19980.100ENSCVAG00000019431rpa19980.396Cyprinodon_variegatus
ENSTRUG00000003616rpa19972.788ENSDARG00000003938rpa19972.788Danio_rerio
ENSTRUG00000003616rpa19963.816ENSDNOG00000017218RPA19963.816Dasypus_novemcinctus
ENSTRUG00000003616rpa19963.875ENSDORG00000006199Rpa19964.039Dipodomys_ordii
ENSTRUG00000003616rpa19942.182FBgn0010173RpA-709942.974Drosophila_melanogaster
ENSTRUG00000003616rpa18273.469ENSETEG00000017608RPA18273.469Echinops_telfairi
ENSTRUG00000003616rpa19764.686ENSEASG00005009372RPA19964.779Equus_asinus_asinus
ENSTRUG00000003616rpa19963.487ENSECAG00000023886RPA19963.651Equus_caballus
ENSTRUG00000003616rpa16970.433ENSEEUG00000002186-6870.433Erinaceus_europaeus
ENSTRUG00000003616rpa18861.509ENSELUG00000006136RPA19961.509Esox_lucius
ENSTRUG00000003616rpa19977.243ENSELUG00000021071rpa19977.243Esox_lucius
ENSTRUG00000003616rpa19963.547ENSFCAG00000006306RPA19963.547Felis_catus
ENSTRUG00000003616rpa19963.011ENSFALG00000006575RPA19963.011Ficedula_albicollis
ENSTRUG00000003616rpa19964.309ENSFDAG00000007720RPA19964.309Fukomys_damarensis
ENSTRUG00000003616rpa19980.897ENSFHEG00000003580rpa19980.897Fundulus_heteroclitus
ENSTRUG00000003616rpa19973.490ENSGMOG00000010382rpa19973.490Gadus_morhua
ENSTRUG00000003616rpa19962.211ENSGALG00000003072RPA19962.211Gallus_gallus
ENSTRUG00000003616rpa19979.599ENSGAFG00000012916rpa19979.599Gambusia_affinis
ENSTRUG00000003616rpa19959.021ENSGAFG00000020953RPA19958.923Gambusia_affinis
ENSTRUG00000003616rpa110080.431ENSGACG00000010856rpa110080.431Gasterosteus_aculeatus
ENSTRUG00000003616rpa19964.754ENSGAGG00000013611RPA19964.754Gopherus_agassizii
ENSTRUG00000003616rpa19963.987ENSGGOG00000014186RPA19963.987Gorilla_gorilla
ENSTRUG00000003616rpa19556.649ENSHBUG00000009348RPA19856.649Haplochromis_burtoni
ENSTRUG00000003616rpa19983.667ENSHBUG00000017773rpa19983.667Haplochromis_burtoni
ENSTRUG00000003616rpa19963.980ENSHGLG00000008846RPA19963.980Heterocephalus_glaber_female
ENSTRUG00000003616rpa19963.980ENSHGLG00100017755-9963.980Heterocephalus_glaber_male
ENSTRUG00000003616rpa19954.486ENSHGLG00100002005-9954.486Heterocephalus_glaber_male
ENSTRUG00000003616rpa19959.902ENSHGLG00100000799-9959.902Heterocephalus_glaber_male
ENSTRUG00000003616rpa19946.090ENSHCOG00000000351RPA19846.090Hippocampus_comes
ENSTRUG00000003616rpa19973.934ENSHCOG00000001401rpa19974.262Hippocampus_comes
ENSTRUG00000003616rpa19973.790ENSIPUG00000004400rpa19973.790Ictalurus_punctatus
ENSTRUG00000003616rpa19362.414ENSSTOG00000022475RPA19662.414Ictidomys_tridecemlineatus
ENSTRUG00000003616rpa19564.846ENSJJAG00000000876Rpa19864.846Jaculus_jaculus
ENSTRUG00000003616rpa110077.049ENSKMAG00000005605rpa110077.049Kryptolebias_marmoratus
ENSTRUG00000003616rpa19960.697ENSKMAG00000000234RPA19960.697Kryptolebias_marmoratus
ENSTRUG00000003616rpa19983.056ENSLBEG00000021604rpa19982.919Labrus_bergylta
ENSTRUG00000003616rpa19968.636ENSLBEG00000002281RPA18668.636Labrus_bergylta
ENSTRUG00000003616rpa17664.069ENSLACG00000007210RPA19364.069Latimeria_chalumnae
ENSTRUG00000003616rpa19970.167ENSLOCG00000006397rpa19970.333Lepisosteus_oculatus
ENSTRUG00000003616rpa19961.974ENSLAFG00000015354RPA19961.974Loxodonta_africana
ENSTRUG00000003616rpa18061.741ENSMFAG00000036138-9861.741Macaca_fascicularis
ENSTRUG00000003616rpa19863.079ENSMMUG00000011604-9963.079Macaca_mulatta
ENSTRUG00000003616rpa19958.706ENSMMUG00000002442-9958.706Macaca_mulatta
ENSTRUG00000003616rpa19563.311ENSMNEG00000031632-9863.311Macaca_nemestrina
ENSTRUG00000003616rpa18765.934ENSMNEG00000029837-9665.934Macaca_nemestrina
ENSTRUG00000003616rpa19660.811ENSMLEG00000038768-9860.980Mandrillus_leucophaeus
ENSTRUG00000003616rpa19768.140ENSMAMG00000020097RPA18967.045Mastacembelus_armatus
ENSTRUG00000003616rpa110084.667ENSMAMG00000017993rpa110084.667Mastacembelus_armatus
ENSTRUG00000003616rpa19961.417ENSMZEG00005024731RPA19961.417Maylandia_zebra
ENSTRUG00000003616rpa19983.500ENSMZEG00005007551rpa19983.500Maylandia_zebra
ENSTRUG00000003616rpa19861.692ENSMGAG00000005315RPA19861.692Meleagris_gallopavo
ENSTRUG00000003616rpa19664.129ENSMAUG00000010474Rpa19864.346Mesocricetus_auratus
ENSTRUG00000003616rpa19963.651ENSMICG00000012867RPA19963.651Microcebus_murinus
ENSTRUG00000003616rpa19962.951ENSMOCG00000013019Rpa19962.951Microtus_ochrogaster
ENSTRUG00000003616rpa19861.695ENSMMOG00000010868RPA19861.695Mola_mola
ENSTRUG00000003616rpa110081.667ENSMMOG00000014292rpa19983.938Mola_mola
ENSTRUG00000003616rpa19963.487ENSMODG00000010549RPA19863.487Monodelphis_domestica
ENSTRUG00000003616rpa110084.833ENSMALG00000011453rpa110084.833Monopterus_albus
ENSTRUG00000003616rpa19968.864ENSMALG00000001208RPA18768.864Monopterus_albus
ENSTRUG00000003616rpa19962.480MGP_CAROLIEiJ_G0016734Rpa19962.520Mus_caroli
ENSTRUG00000003616rpa19961.551ENSMUSG00000000751Rpa19961.912Mus_musculus
ENSTRUG00000003616rpa19962.662MGP_PahariEiJ_G0017871Rpa19962.866Mus_pahari
ENSTRUG00000003616rpa19961.452MGP_SPRETEiJ_G0017577Rpa19961.812Mus_spretus
ENSTRUG00000003616rpa19963.980ENSMPUG00000013119RPA19963.980Mustela_putorius_furo
ENSTRUG00000003616rpa19961.626ENSMLUG00000006113RPA19961.626Myotis_lucifugus
ENSTRUG00000003616rpa19564.103ENSNGAG00000004522Rpa19364.103Nannospalax_galili
ENSTRUG00000003616rpa19482.509ENSNBRG00000020595rpa19982.509Neolamprologus_brichardi
ENSTRUG00000003616rpa19958.814ENSNBRG00000009672RPA19858.814Neolamprologus_brichardi
ENSTRUG00000003616rpa19963.770ENSNLEG00000017149RPA19963.770Nomascus_leucogenys
ENSTRUG00000003616rpa19655.442ENSMEUG00000006714RPA19755.442Notamacropus_eugenii
ENSTRUG00000003616rpa19662.604ENSODEG00000009038RPA19762.604Octodon_degus
ENSTRUG00000003616rpa19982.353ENSONIG00000013135rpa19982.353Oreochromis_niloticus
ENSTRUG00000003616rpa19864.238ENSOANG00000010880RPA19964.238Ornithorhynchus_anatinus
ENSTRUG00000003616rpa19961.189ENSOCUG00000001504RPA19961.189Oryctolagus_cuniculus
ENSTRUG00000003616rpa19980.301ENSORLG00000004856rpa110080.301Oryzias_latipes
ENSTRUG00000003616rpa19957.385ENSORLG00000003368RPA19957.385Oryzias_latipes
ENSTRUG00000003616rpa19955.438ENSORLG00020015284RPA19955.438Oryzias_latipes_hni
ENSTRUG00000003616rpa19980.634ENSORLG00020008980rpa110080.634Oryzias_latipes_hni
ENSTRUG00000003616rpa19980.634ENSORLG00015013982rpa110080.634Oryzias_latipes_hsok
ENSTRUG00000003616rpa17066.826ENSORLG00015005867-9566.826Oryzias_latipes_hsok
ENSTRUG00000003616rpa19958.438ENSORLG00015020383RPA19958.438Oryzias_latipes_hsok
ENSTRUG00000003616rpa19977.963ENSOMEG00000004704rpa110077.963Oryzias_melastigma
ENSTRUG00000003616rpa19459.155ENSOMEG00000011040RPA19959.155Oryzias_melastigma
ENSTRUG00000003616rpa19964.098ENSOGAG00000005581-9964.098Otolemur_garnettii
ENSTRUG00000003616rpa17574.595ENSOGAG00000029379-9874.595Otolemur_garnettii
ENSTRUG00000003616rpa19963.322ENSOARG00000014479RPA19963.651Ovis_aries
ENSTRUG00000003616rpa19963.607ENSPPAG00000039680RPA19963.607Pan_paniscus
ENSTRUG00000003616rpa19963.547ENSPPRG00000011807RPA19963.547Panthera_pardus
ENSTRUG00000003616rpa19963.547ENSPTIG00000007898RPA19963.547Panthera_tigris_altaica
ENSTRUG00000003616rpa19963.770ENSPTRG00000008539RPA19963.770Pan_troglodytes
ENSTRUG00000003616rpa19963.158ENSPANG00000024592RPA19963.158Papio_anubis
ENSTRUG00000003616rpa19971.808ENSPKIG00000008053rpa19871.973Paramormyrops_kingsleyae
ENSTRUG00000003616rpa19764.548ENSPSIG00000015617RPA19864.548Pelodiscus_sinensis
ENSTRUG00000003616rpa19979.630ENSPMGG00000011589rpa19979.496Periophthalmus_magnuspinnatus
ENSTRUG00000003616rpa19958.746ENSPMGG00000000543RPA19961.871Periophthalmus_magnuspinnatus
ENSTRUG00000003616rpa19963.651ENSPEMG00000021061Rpa19963.651Peromyscus_maniculatus_bairdii
ENSTRUG00000003616rpa19963.054ENSPCIG00000019049RPA19863.115Phascolarctos_cinereus
ENSTRUG00000003616rpa19980.435ENSPFOG00000003987rpa19980.435Poecilia_formosa
ENSTRUG00000003616rpa19980.268ENSPLAG00000004984rpa19980.268Poecilia_latipinna
ENSTRUG00000003616rpa19459.121ENSPLAG00000008844-9659.121Poecilia_latipinna
ENSTRUG00000003616rpa19980.602ENSPMEG00000020602rpa19980.602Poecilia_mexicana
ENSTRUG00000003616rpa19458.632ENSPMEG00000003627-9658.795Poecilia_mexicana
ENSTRUG00000003616rpa19372.809ENSPREG00000010174rpa19572.679Poecilia_reticulata
ENSTRUG00000003616rpa19271.136ENSPREG00000010119RPA19171.298Poecilia_reticulata
ENSTRUG00000003616rpa19963.666ENSPCOG00000001799RPA19963.666Propithecus_coquereli
ENSTRUG00000003616rpa19962.664ENSPVAG00000002149RPA19962.664Pteropus_vampyrus
ENSTRUG00000003616rpa19983.667ENSPNYG00000016316rpa19983.667Pundamilia_nyererei
ENSTRUG00000003616rpa19961.260ENSPNYG00000024165RPA19961.260Pundamilia_nyererei
ENSTRUG00000003616rpa19964.706ENSPNAG00000008599rpa19963.383Pygocentrus_nattereri
ENSTRUG00000003616rpa19671.359ENSRNOG00000003123Rpa19964.145Rattus_norvegicus
ENSTRUG00000003616rpa19962.664ENSRBIG00000036587RPA19962.664Rhinopithecus_bieti
ENSTRUG00000003616rpa19958.059ENSRROG00000043278RPA19958.059Rhinopithecus_roxellana
ENSTRUG00000003616rpa19432.935YAR007CRFA19332.935Saccharomyces_cerevisiae
ENSTRUG00000003616rpa19164.401ENSSBOG00000030233RPA19664.401Saimiri_boliviensis_boliviensis
ENSTRUG00000003616rpa19963.322ENSSHAG00000007969RPA19863.547Sarcophilus_harrisii
ENSTRUG00000003616rpa19975.748ENSSFOG00015005362rpa19275.748Scleropages_formosus
ENSTRUG00000003616rpa19957.165ENSSMAG00000019746RPA19957.165Scophthalmus_maximus
ENSTRUG00000003616rpa19965.574ENSSDUG00000016358RPA19165.574Seriola_dumerili
ENSTRUG00000003616rpa110085.000ENSSDUG00000011949rpa110085.000Seriola_dumerili
ENSTRUG00000003616rpa110085.167ENSSLDG00000011806rpa110085.167Seriola_lalandi_dorsalis
ENSTRUG00000003616rpa19271.163ENSSLDG00000020784RPA18470.455Seriola_lalandi_dorsalis
ENSTRUG00000003616rpa19650.850ENSSARG00000007506RPA19750.850Sorex_araneus
ENSTRUG00000003616rpa19762.755ENSSPUG00000007223RPA19862.755Sphenodon_punctatus
ENSTRUG00000003616rpa19861.969ENSSPAG00000011165RPA19861.969Stegastes_partitus
ENSTRUG00000003616rpa110082.667ENSSPAG00000009903rpa110082.667Stegastes_partitus
ENSTRUG00000003616rpa19963.819ENSSSCG00000017822RPA19963.819Sus_scrofa
ENSTRUG00000003616rpa19962.069ENSTGUG00000005775RPA19962.069Taeniopygia_guttata
ENSTRUG00000003616rpa110088.399ENSTNIG00000016199rpa19988.562Tetraodon_nigroviridis
ENSTRUG00000003616rpa17270.968ENSTBEG00000002709RPA17370.968Tupaia_belangeri
ENSTRUG00000003616rpa19962.171ENSTTRG00000001169RPA19962.500Tursiops_truncatus
ENSTRUG00000003616rpa18669.231ENSUAMG00000015676RPA19569.231Ursus_americanus
ENSTRUG00000003616rpa19963.987ENSUMAG00000009328RPA19963.987Ursus_maritimus
ENSTRUG00000003616rpa19861.424ENSVPAG00000009443RPA19861.424Vicugna_pacos
ENSTRUG00000003616rpa19963.651ENSVVUG00000021715RPA19964.309Vulpes_vulpes
ENSTRUG00000003616rpa110065.534ENSXETG00000013538rpa19966.941Xenopus_tropicalis
ENSTRUG00000003616rpa19562.653ENSXCOG00000009899-9962.653Xiphophorus_couchianus
ENSTRUG00000003616rpa19379.032ENSXCOG00000010068rpa19479.032Xiphophorus_couchianus
ENSTRUG00000003616rpa19979.431ENSXMAG00000004102rpa19980.396Xiphophorus_maculatus
ENSTRUG00000003616rpa19370.843ENSXMAG00000010333RPA18870.682Xiphophorus_maculatus

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