EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTRUG00000003641 (Gene tree)
Gene ID: -
Gene Symbol: arl13b
Alias: arl2l1|chunp6872|dkfzp761h079|fc23g07|scorpion|un-named hi459|unm hi459|wu:fc23g07|zgc:123149
Full Name: ADP-ribosylation factor-like 13b
Gene Type: protein_coding
Species: Takifugu_rubripes
Status: putative
Strand: Plus strand
Length: 5694 bases
Position: chrHE594684.1:491-6184
Accession: ZDB-GENE-021217-3
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTRUP00000008535	MMR_HSR1	PF01926.23	2.6e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTRUT00000008586	-	795	-	ENSTRUP00000008535	264 (aa)	-	H2S810

Gene Model

Click here to download ENSTRUG00000003641's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTRUG00000003641's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTRUG00000003641	arl13b	53	32.394	ENSTRUG00000020509	-	74	32.394
ENSTRUG00000003641	arl13b	52	33.333	ENSTRUG00000003085	arl4cb	73	33.333
ENSTRUG00000003641	arl13b	64	32.948	ENSTRUG00000017239	ARL6	89	32.948
ENSTRUG00000003641	arl13b	64	34.706	ENSTRUG00000004035	arl3l2	86	34.706
ENSTRUG00000003641	arl13b	63	30.857	ENSTRUG00000009319	arfrp1	84	30.857
ENSTRUG00000003641	arl13b	62	30.061	ENSTRUG00000020453	arl8	86	30.061
ENSTRUG00000003641	arl13b	50	33.333	ENSTRUG00000003183	-	71	33.333
ENSTRUG00000003641	arl13b	61	31.902	ENSTRUG00000011561	arl11	92	31.902
ENSTRUG00000003641	arl13b	75	30.622	ENSTRUG00000003716	-	85	30.622
ENSTRUG00000003641	arl13b	63	30.539	ENSTRUG00000014380	-	87	30.539
ENSTRUG00000003641	arl13b	62	34.884	ENSTRUG00000007269	sar1ab	84	34.884
ENSTRUG00000003641	arl13b	54	33.566	ENSTRUG00000013912	arl8a	76	33.566
ENSTRUG00000003641	arl13b	69	31.183	ENSTRUG00000018668	-	89	31.183
ENSTRUG00000003641	arl13b	63	33.939	ENSTRUG00000025462	-	87	33.939
ENSTRUG00000003641	arl13b	54	33.566	ENSTRUG00000011496	arl8bb	76	33.566
ENSTRUG00000003641	arl13b	56	31.544	ENSTRUG00000022814	arl5c	82	31.544
ENSTRUG00000003641	arl13b	68	31.551	ENSTRUG00000024375	-	85	31.551
ENSTRUG00000003641	arl13b	80	100.000	ENSTRUG00000013035	-	81	100.000
ENSTRUG00000003641	arl13b	63	31.138	ENSTRUG00000023041	-	87	31.138
ENSTRUG00000003641	arl13b	63	33.523	ENSTRUG00000023908	sar1b	86	33.523
ENSTRUG00000003641	arl13b	64	36.471	ENSTRUG00000018107	arl3	88	36.471
ENSTRUG00000003641	arl13b	63	31.361	ENSTRUG00000006254	arl1	87	31.361
ENSTRUG00000003641	arl13b	63	30.539	ENSTRUG00000019870	-	88	30.539
ENSTRUG00000003641	arl13b	63	37.126	ENSTRUG00000005435	arl2	86	37.126
ENSTRUG00000003641	arl13b	63	32.121	ENSTRUG00000014614	arl5a	87	32.121
ENSTRUG00000003641	arl13b	54	31.469	ENSTRUG00000023169	arl8ba	76	31.469
ENSTRUG00000003641	arl13b	54	31.818	ENSTRUG00000008027	arl4aa	78	31.818

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTRUG00000003641	arl13b	74	71.939	ENSAPOG00000013256	arl13b	51	72.727	Acanthochromis_polyacanthus
ENSTRUG00000003641	arl13b	74	71.429	ENSACIG00000017582	arl13b	89	71.163	Amphilophus_citrinellus
ENSTRUG00000003641	arl13b	74	71.939	ENSAOCG00000002828	arl13b	54	72.727	Amphiprion_ocellaris
ENSTRUG00000003641	arl13b	74	71.939	ENSAPEG00000014654	arl13b	54	72.727	Amphiprion_percula
ENSTRUG00000003641	arl13b	75	72.362	ENSATEG00000017586	arl13b	54	73.206	Anabas_testudineus
ENSTRUG00000003641	arl13b	77	66.337	ENSACAG00000000523	ARL13B	51	67.453	Anolis_carolinensis
ENSTRUG00000003641	arl13b	74	70.918	ENSACLG00000024227	arl13b	89	72.249	Astatotilapia_calliptera
ENSTRUG00000003641	arl13b	78	70.732	ENSAMXG00000042824	arl13b	54	71.292	Astyanax_mexicanus
ENSTRUG00000003641	arl13b	78	67.317	ENSCAPG00000006764	ARL13B	57	67.317	Cavia_aperea
ENSTRUG00000003641	arl13b	76	68.159	ENSCPOG00000002558	ARL13B	53	68.159	Cavia_porcellus
ENSTRUG00000003641	arl13b	79	67.943	ENSCLAG00000006379	ARL13B	51	67.943	Chinchilla_lanigera
ENSTRUG00000003641	arl13b	78	66.341	ENSCPBG00000005599	ARL13B	52	66.981	Chrysemys_picta_bellii
ENSTRUG00000003641	arl13b	79	73.077	ENSCSEG00000005258	arl13b	61	73.077	Cynoglossus_semilaevis
ENSTRUG00000003641	arl13b	74	70.918	ENSCVAG00000001545	arl13b	89	68.584	Cyprinodon_variegatus
ENSTRUG00000003641	arl13b	87	66.953	ENSDARG00000012763	arl13b	89	66.953	Danio_rerio
ENSTRUG00000003641	arl13b	82	52.778	ENSEBUG00000006528	arl13b	81	52.778	Eptatretus_burgeri
ENSTRUG00000003641	arl13b	83	64.091	ENSEEUG00000010823	ARL13B	51	64.091	Erinaceus_europaeus
ENSTRUG00000003641	arl13b	75	64.646	ENSFALG00000001654	ARL13B	53	66.038	Ficedula_albicollis
ENSTRUG00000003641	arl13b	78	66.505	ENSFDAG00000006556	ARL13B	50	65.581	Fukomys_damarensis
ENSTRUG00000003641	arl13b	74	70.408	ENSFHEG00000016049	arl13b	54	71.770	Fundulus_heteroclitus
ENSTRUG00000003641	arl13b	78	69.756	ENSGMOG00000018628	arl13b	62	69.856	Gadus_morhua
ENSTRUG00000003641	arl13b	85	68.860	ENSGAFG00000000025	arl13b	84	68.860	Gambusia_affinis
ENSTRUG00000003641	arl13b	79	70.192	ENSGACG00000014228	arl13b	52	70.335	Gasterosteus_aculeatus
ENSTRUG00000003641	arl13b	79	65.865	ENSGAGG00000019336	ARL13B	52	66.509	Gopherus_agassizii
ENSTRUG00000003641	arl13b	74	70.918	ENSHBUG00000020619	arl13b	53	72.249	Haplochromis_burtoni
ENSTRUG00000003641	arl13b	74	71.939	ENSHCOG00000006106	arl13b	55	73.206	Hippocampus_comes
ENSTRUG00000003641	arl13b	74	72.449	ENSKMAG00000001122	arl13b	51	73.684	Kryptolebias_marmoratus
ENSTRUG00000003641	arl13b	77	72.772	ENSLBEG00000014612	arl13b	54	73.206	Labrus_bergylta
ENSTRUG00000003641	arl13b	77	73.762	ENSMAMG00000021452	arl13b	54	73.684	Mastacembelus_armatus
ENSTRUG00000003641	arl13b	74	70.918	ENSMZEG00005017827	arl13b	53	72.249	Maylandia_zebra
ENSTRUG00000003641	arl13b	75	72.864	ENSMMOG00000010253	arl13b	54	73.684	Mola_mola
ENSTRUG00000003641	arl13b	80	72.170	ENSMALG00000014655	arl13b	66	72.170	Monopterus_albus
ENSTRUG00000003641	arl13b	77	66.832	MGP_CAROLIEiJ_G0020856	Arl13b	50	66.512	Mus_caroli
ENSTRUG00000003641	arl13b	77	66.832	ENSMUSG00000022911	Arl13b	50	66.512	Mus_musculus
ENSTRUG00000003641	arl13b	77	66.832	MGP_PahariEiJ_G0016561	Arl13b	50	66.512	Mus_pahari
ENSTRUG00000003641	arl13b	77	66.832	MGP_SPRETEiJ_G0021763	Arl13b	50	66.512	Mus_spretus
ENSTRUG00000003641	arl13b	78	65.700	ENSMLUG00000017473	ARL13B	50	65.728	Myotis_lucifugus
ENSTRUG00000003641	arl13b	79	72.115	ENSNBRG00000004078	arl13b	84	72.115	Neolamprologus_brichardi
ENSTRUG00000003641	arl13b	83	63.182	ENSNLEG00000001772	ARL13B	51	63.182	Nomascus_leucogenys
ENSTRUG00000003641	arl13b	79	62.679	ENSMEUG00000008036	-	52	62.679	Notamacropus_eugenii
ENSTRUG00000003641	arl13b	80	66.981	ENSODEG00000011381	ARL13B	50	66.047	Octodon_degus
ENSTRUG00000003641	arl13b	74	71.939	ENSORLG00000006350	arl13b	86	71.429	Oryzias_latipes
ENSTRUG00000003641	arl13b	74	71.939	ENSORLG00020013754	arl13b	53	73.206	Oryzias_latipes_hni
ENSTRUG00000003641	arl13b	74	71.939	ENSORLG00015012586	arl13b	53	73.206	Oryzias_latipes_hsok
ENSTRUG00000003641	arl13b	74	70.408	ENSOMEG00000010187	arl13b	81	71.770	Oryzias_melastigma
ENSTRUG00000003641	arl13b	80	66.509	ENSPSIG00000018115	ARL13B	52	66.509	Pelodiscus_sinensis
ENSTRUG00000003641	arl13b	74	74.490	ENSPMGG00000004584	arl13b	52	75.598	Periophthalmus_magnuspinnatus
ENSTRUG00000003641	arl13b	74	71.429	ENSPFOG00000005379	arl13b	52	72.727	Poecilia_formosa
ENSTRUG00000003641	arl13b	74	70.918	ENSPLAG00000008699	arl13b	55	72.249	Poecilia_latipinna
ENSTRUG00000003641	arl13b	74	71.429	ENSPMEG00000015387	arl13b	54	72.727	Poecilia_mexicana
ENSTRUG00000003641	arl13b	74	71.429	ENSPREG00000006291	arl13b	53	72.727	Poecilia_reticulata
ENSTRUG00000003641	arl13b	74	70.918	ENSPNYG00000022879	arl13b	56	72.249	Pundamilia_nyererei
ENSTRUG00000003641	arl13b	74	70.408	ENSPNAG00000003803	arl13b	52	71.770	Pygocentrus_nattereri
ENSTRUG00000003641	arl13b	78	67.317	ENSSFOG00015005491	arl13b	80	67.317	Scleropages_formosus
ENSTRUG00000003641	arl13b	73	65.464	ENSSFOG00015023057	arl13b	76	65.464	Scleropages_formosus
ENSTRUG00000003641	arl13b	74	69.898	ENSSMAG00000015450	arl13b	54	71.292	Scophthalmus_maximus
ENSTRUG00000003641	arl13b	74	71.939	ENSSDUG00000005560	arl13b	52	73.206	Seriola_dumerili
ENSTRUG00000003641	arl13b	74	71.939	ENSSLDG00000013361	arl13b	54	73.206	Seriola_lalandi_dorsalis
ENSTRUG00000003641	arl13b	78	67.476	ENSSARG00000003872	ARL13B	50	66.512	Sorex_araneus
ENSTRUG00000003641	arl13b	80	67.925	ENSSPUG00000006649	ARL13B	86	67.925	Sphenodon_punctatus
ENSTRUG00000003641	arl13b	80	65.566	ENSTGUG00000013493	ARL13B	50	64.651	Taeniopygia_guttata
ENSTRUG00000003641	arl13b	78	65.534	ENSVVUG00000021511	ARL13B	53	64.651	Vulpes_vulpes
ENSTRUG00000003641	arl13b	82	66.359	ENSXETG00000032383	ARL13B	77	67.453	Xenopus_tropicalis
ENSTRUG00000003641	arl13b	74	71.939	ENSXCOG00000016955	arl13b	57	73.206	Xiphophorus_couchianus
ENSTRUG00000003641	arl13b	74	71.429	ENSXMAG00000002089	arl13b	55	72.727	Xiphophorus_maculatus