EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSTRUG00000003755 (Gene tree)
Gene ID: 101069947
Gene Symbol: rpp40
Alias: Rpp40|rpp40l|zgc:86704
Full Name: ribonuclease P/MRP subunit p40
Gene Type: protein_coding
Species: Takifugu_rubripes
Status: putative
Strand: Plus strand
Length: 3520 bases
Position: chrHE593764.1:3890-7409
Accession: 101069947
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTRUP00000008818	Ribonuc_P_40	PF08584.11	1.7e-82	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTRUT00000008869	-	2500	XM_003979511	ENSTRUP00000008818	353 (aa)	XP_003979560	H2S8U2

Gene Model

Click here to download ENSTRUG00000003755's gene model file

Pathways

Pathway ID	Pathway Name	Source
tru03008	Ribosome biogenesis in eukaryotes	KEGG
tru03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSTRUG00000003755's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTRUG00000003755	rpp40	98	39.377	ENSG00000124787	RPP40	98	40.268	Homo_sapiens
ENSTRUG00000003755	rpp40	89	59.937	ENSAPOG00000008660	rpp40	92	59.937	Acanthochromis_polyacanthus
ENSTRUG00000003755	rpp40	98	40.510	ENSAMEG00000012938	RPP40	97	40.510	Ailuropoda_melanoleuca
ENSTRUG00000003755	rpp40	98	65.706	ENSACIG00000003617	rpp40	97	65.706	Amphilophus_citrinellus
ENSTRUG00000003755	rpp40	99	71.875	ENSAOCG00000011846	rpp40	99	71.875	Amphiprion_ocellaris
ENSTRUG00000003755	rpp40	99	71.875	ENSAPEG00000001322	rpp40	99	71.875	Amphiprion_percula
ENSTRUG00000003755	rpp40	99	66.667	ENSATEG00000006584	rpp40	99	66.667	Anabas_testudineus
ENSTRUG00000003755	rpp40	83	38.206	ENSAPLG00000005691	RPP40	99	38.206	Anas_platyrhynchos
ENSTRUG00000003755	rpp40	98	38.068	ENSACAG00000006550	RPP40	86	38.068	Anolis_carolinensis
ENSTRUG00000003755	rpp40	98	37.677	ENSANAG00000029246	RPP40	97	37.677	Aotus_nancymaae
ENSTRUG00000003755	rpp40	97	70.809	ENSACLG00000015883	rpp40	95	70.809	Astatotilapia_calliptera
ENSTRUG00000003755	rpp40	98	49.003	ENSAMXG00000001755	rpp40	98	49.003	Astyanax_mexicanus
ENSTRUG00000003755	rpp40	98	40.793	ENSBTAG00000003332	RPP40	97	40.793	Bos_taurus
ENSTRUG00000003755	rpp40	98	39.093	ENSCJAG00000021373	RPP40	97	39.093	Callithrix_jacchus
ENSTRUG00000003755	rpp40	98	39.943	ENSCAFG00000009435	RPP40	97	39.943	Canis_familiaris
ENSTRUG00000003755	rpp40	98	39.943	ENSCAFG00020013380	RPP40	97	39.943	Canis_lupus_dingo
ENSTRUG00000003755	rpp40	98	39.205	ENSCHIG00000016849	RPP40	99	39.000	Capra_hircus
ENSTRUG00000003755	rpp40	98	39.377	ENSTSYG00000032857	RPP40	98	39.262	Carlito_syrichta
ENSTRUG00000003755	rpp40	90	35.494	ENSCAPG00000004957	RPP40	97	35.494	Cavia_aperea
ENSTRUG00000003755	rpp40	98	39.943	ENSCPOG00000005855	RPP40	97	39.943	Cavia_porcellus
ENSTRUG00000003755	rpp40	98	39.093	ENSCCAG00000019809	RPP40	97	39.093	Cebus_capucinus
ENSTRUG00000003755	rpp40	98	39.093	ENSCATG00000038787	RPP40	97	39.093	Cercocebus_atys
ENSTRUG00000003755	rpp40	98	38.810	ENSCLAG00000003235	RPP40	97	38.810	Chinchilla_lanigera
ENSTRUG00000003755	rpp40	98	39.377	ENSCSAG00000007307	RPP40	97	39.377	Chlorocebus_sabaeus
ENSTRUG00000003755	rpp40	54	41.667	ENSCHOG00000005856	-	76	41.667	Choloepus_hoffmanni
ENSTRUG00000003755	rpp40	98	37.960	ENSCPBG00000009003	RPP40	97	37.960	Chrysemys_picta_bellii
ENSTRUG00000003755	rpp40	98	39.093	ENSCANG00000033965	RPP40	97	39.093	Colobus_angolensis_palliatus
ENSTRUG00000003755	rpp40	98	38.527	ENSCGRG00001018328	Rpp40	97	38.527	Cricetulus_griseus_chok1gshd
ENSTRUG00000003755	rpp40	98	38.527	ENSCGRG00000011344	Rpp40	97	38.527	Cricetulus_griseus_crigri
ENSTRUG00000003755	rpp40	99	57.224	ENSCSEG00000015006	-	99	57.507	Cynoglossus_semilaevis
ENSTRUG00000003755	rpp40	74	53.383	ENSCVAG00000012169	rpp40	100	54.135	Cyprinodon_variegatus
ENSTRUG00000003755	rpp40	99	47.619	ENSDARG00000017605	rpp40	99	47.619	Danio_rerio
ENSTRUG00000003755	rpp40	79	38.328	ENSDNOG00000048136	RPP40	96	38.328	Dasypus_novemcinctus
ENSTRUG00000003755	rpp40	98	38.244	ENSDORG00000029944	-	97	38.244	Dipodomys_ordii
ENSTRUG00000003755	rpp40	98	31.476	ENSDORG00000011196	-	97	31.476	Dipodomys_ordii
ENSTRUG00000003755	rpp40	98	31.161	ENSETEG00000007458	RPP40	97	31.161	Echinops_telfairi
ENSTRUG00000003755	rpp40	99	39.385	ENSEBUG00000000386	rpp40	99	39.875	Eptatretus_burgeri
ENSTRUG00000003755	rpp40	98	39.660	ENSEASG00005012116	RPP40	78	39.660	Equus_asinus_asinus
ENSTRUG00000003755	rpp40	98	39.943	ENSECAG00000017247	RPP40	78	39.943	Equus_caballus
ENSTRUG00000003755	rpp40	79	33.217	ENSEEUG00000012087	RPP40	97	33.217	Erinaceus_europaeus
ENSTRUG00000003755	rpp40	99	50.420	ENSELUG00000017004	rpp40	99	50.420	Esox_lucius
ENSTRUG00000003755	rpp40	98	39.377	ENSFCAG00000009249	RPP40	97	39.377	Felis_catus
ENSTRUG00000003755	rpp40	86	37.846	ENSFALG00000013166	RPP40	99	37.846	Ficedula_albicollis
ENSTRUG00000003755	rpp40	98	39.377	ENSFDAG00000013001	-	97	39.377	Fukomys_damarensis
ENSTRUG00000003755	rpp40	80	35.069	ENSFDAG00000000265	-	99	35.069	Fukomys_damarensis
ENSTRUG00000003755	rpp40	99	68.571	ENSFHEG00000021429	rpp40	88	68.571	Fundulus_heteroclitus
ENSTRUG00000003755	rpp40	89	45.455	ENSGMOG00000018653	rpp40	100	45.455	Gadus_morhua
ENSTRUG00000003755	rpp40	99	37.746	ENSGALG00000036074	RPP40	98	37.746	Gallus_gallus
ENSTRUG00000003755	rpp40	84	54.698	ENSGAFG00000004189	-	100	54.698	Gambusia_affinis
ENSTRUG00000003755	rpp40	99	73.714	ENSGACG00000002472	rpp40	99	73.714	Gasterosteus_aculeatus
ENSTRUG00000003755	rpp40	98	38.527	ENSGAGG00000012918	RPP40	97	38.527	Gopherus_agassizii
ENSTRUG00000003755	rpp40	98	39.377	ENSGGOG00000013764	RPP40	97	39.377	Gorilla_gorilla
ENSTRUG00000003755	rpp40	92	67.069	ENSHBUG00000009378	rpp40	96	67.069	Haplochromis_burtoni
ENSTRUG00000003755	rpp40	98	39.377	ENSHGLG00000004871	RPP40	97	39.377	Heterocephalus_glaber_female
ENSTRUG00000003755	rpp40	98	39.377	ENSHGLG00100002080	RPP40	97	39.377	Heterocephalus_glaber_male
ENSTRUG00000003755	rpp40	98	51.003	ENSHCOG00000013264	-	95	51.003	Hippocampus_comes
ENSTRUG00000003755	rpp40	99	47.887	ENSIPUG00000008951	RPP40	99	47.887	Ictalurus_punctatus
ENSTRUG00000003755	rpp40	98	40.793	ENSSTOG00000011199	RPP40	97	40.793	Ictidomys_tridecemlineatus
ENSTRUG00000003755	rpp40	98	40.625	ENSJJAG00000020629	Rpp40	97	40.625	Jaculus_jaculus
ENSTRUG00000003755	rpp40	99	70.170	ENSKMAG00000019358	rpp40	99	70.170	Kryptolebias_marmoratus
ENSTRUG00000003755	rpp40	99	75.714	ENSLBEG00000022724	rpp40	99	75.714	Labrus_bergylta
ENSTRUG00000003755	rpp40	100	40.278	ENSLACG00000014848	RPP40	99	40.278	Latimeria_chalumnae
ENSTRUG00000003755	rpp40	100	44.444	ENSLOCG00000011650	rpp40	99	44.444	Lepisosteus_oculatus
ENSTRUG00000003755	rpp40	82	39.933	ENSLAFG00000007530	RPP40	98	39.933	Loxodonta_africana
ENSTRUG00000003755	rpp40	98	38.527	ENSMFAG00000043100	RPP40	97	38.527	Macaca_fascicularis
ENSTRUG00000003755	rpp40	98	38.527	ENSMMUG00000004966	RPP40	97	38.527	Macaca_mulatta
ENSTRUG00000003755	rpp40	98	38.810	ENSMNEG00000041986	RPP40	98	39.597	Macaca_nemestrina
ENSTRUG00000003755	rpp40	98	34.278	ENSMLEG00000040851	RPP40	99	38.728	Mandrillus_leucophaeus
ENSTRUG00000003755	rpp40	99	73.295	ENSMAMG00000019551	rpp40	99	73.295	Mastacembelus_armatus
ENSTRUG00000003755	rpp40	99	71.023	ENSMZEG00005019475	rpp40	99	71.023	Maylandia_zebra
ENSTRUG00000003755	rpp40	89	39.441	ENSMGAG00000004009	RPP40	89	39.441	Meleagris_gallopavo
ENSTRUG00000003755	rpp40	98	40.227	ENSMAUG00000010268	Rpp40	97	40.227	Mesocricetus_auratus
ENSTRUG00000003755	rpp40	98	41.360	ENSMICG00000003297	RPP40	97	37.394	Microcebus_murinus
ENSTRUG00000003755	rpp40	98	40.510	ENSMOCG00000000305	Rpp40	97	40.510	Microtus_ochrogaster
ENSTRUG00000003755	rpp40	99	63.429	ENSMMOG00000020591	-	99	63.429	Mola_mola
ENSTRUG00000003755	rpp40	98	38.136	ENSMODG00000009826	RPP40	97	38.136	Monodelphis_domestica
ENSTRUG00000003755	rpp40	99	75.568	ENSMALG00000020133	rpp40	99	75.728	Monopterus_albus
ENSTRUG00000003755	rpp40	99	40.336	MGP_CAROLIEiJ_G0018429	Rpp40	98	40.336	Mus_caroli
ENSTRUG00000003755	rpp40	98	40.227	ENSMUSG00000021418	Rpp40	97	40.227	Mus_musculus
ENSTRUG00000003755	rpp40	99	40.336	MGP_PahariEiJ_G0019497	Rpp40	98	40.336	Mus_pahari
ENSTRUG00000003755	rpp40	99	39.776	MGP_SPRETEiJ_G0019309	Rpp40	98	39.776	Mus_spretus
ENSTRUG00000003755	rpp40	98	40.510	ENSMPUG00000000530	RPP40	91	40.510	Mustela_putorius_furo
ENSTRUG00000003755	rpp40	99	40.223	ENSMLUG00000000501	RPP40	99	40.223	Myotis_lucifugus
ENSTRUG00000003755	rpp40	99	39.665	ENSNGAG00000023955	-	99	39.665	Nannospalax_galili
ENSTRUG00000003755	rpp40	95	35.693	ENSNGAG00000022529	-	98	35.693	Nannospalax_galili
ENSTRUG00000003755	rpp40	88	64.465	ENSNBRG00000017465	rpp40	86	64.286	Neolamprologus_brichardi
ENSTRUG00000003755	rpp40	98	39.093	ENSNLEG00000034397	RPP40	97	39.093	Nomascus_leucogenys
ENSTRUG00000003755	rpp40	98	33.711	ENSMEUG00000005300	RPP40	97	33.711	Notamacropus_eugenii
ENSTRUG00000003755	rpp40	89	35.093	ENSODEG00000006170	-	100	35.093	Octodon_degus
ENSTRUG00000003755	rpp40	98	37.677	ENSODEG00000018153	-	97	37.677	Octodon_degus
ENSTRUG00000003755	rpp40	98	39.660	ENSODEG00000007255	-	97	39.660	Octodon_degus
ENSTRUG00000003755	rpp40	99	70.286	ENSONIG00000014016	rpp40	98	70.286	Oreochromis_niloticus
ENSTRUG00000003755	rpp40	82	40.134	ENSOANG00000001200	RPP40	98	40.134	Ornithorhynchus_anatinus
ENSTRUG00000003755	rpp40	97	39.886	ENSOCUG00000000354	RPP40	97	39.886	Oryctolagus_cuniculus
ENSTRUG00000003755	rpp40	100	66.289	ENSORLG00000008242	-	100	66.289	Oryzias_latipes
ENSTRUG00000003755	rpp40	100	66.006	ENSORLG00020013745	-	91	66.006	Oryzias_latipes_hni
ENSTRUG00000003755	rpp40	100	66.572	ENSORLG00015000887	-	100	66.572	Oryzias_latipes_hsok
ENSTRUG00000003755	rpp40	100	67.705	ENSOMEG00000002747	rpp40	100	67.705	Oryzias_melastigma
ENSTRUG00000003755	rpp40	98	41.643	ENSOGAG00000006055	RPP40	97	41.643	Otolemur_garnettii
ENSTRUG00000003755	rpp40	89	38.889	ENSOARG00000018783	RPP40	99	39.667	Ovis_aries
ENSTRUG00000003755	rpp40	98	39.093	ENSPPAG00000023703	RPP40	97	39.093	Pan_paniscus
ENSTRUG00000003755	rpp40	98	39.377	ENSPPRG00000005612	RPP40	97	39.377	Panthera_pardus
ENSTRUG00000003755	rpp40	98	36.676	ENSPTIG00000018847	RPP40	97	36.676	Panthera_tigris_altaica
ENSTRUG00000003755	rpp40	98	39.093	ENSPTRG00000017690	RPP40	97	39.093	Pan_troglodytes
ENSTRUG00000003755	rpp40	98	39.093	ENSPANG00000017865	RPP40	97	39.093	Papio_anubis
ENSTRUG00000003755	rpp40	99	43.417	ENSPKIG00000006311	rpp40	99	43.417	Paramormyrops_kingsleyae
ENSTRUG00000003755	rpp40	61	36.199	ENSPSIG00000007854	RPP40	99	36.199	Pelodiscus_sinensis
ENSTRUG00000003755	rpp40	92	34.139	ENSPEMG00000020809	Rpp40	90	34.139	Peromyscus_maniculatus_bairdii
ENSTRUG00000003755	rpp40	76	39.493	ENSPMAG00000008412	rpp40	99	39.493	Petromyzon_marinus
ENSTRUG00000003755	rpp40	98	38.244	ENSPCIG00000010682	RPP40	97	38.244	Phascolarctos_cinereus
ENSTRUG00000003755	rpp40	99	61.932	ENSPFOG00000011460	rpp40	98	61.932	Poecilia_formosa
ENSTRUG00000003755	rpp40	99	62.286	ENSPLAG00000001334	rpp40	99	62.286	Poecilia_latipinna
ENSTRUG00000003755	rpp40	99	62.857	ENSPMEG00000007721	rpp40	99	62.857	Poecilia_mexicana
ENSTRUG00000003755	rpp40	99	63.429	ENSPREG00000009215	rpp40	99	63.429	Poecilia_reticulata
ENSTRUG00000003755	rpp40	98	39.377	ENSPPYG00000016194	RPP40	97	39.377	Pongo_abelii
ENSTRUG00000003755	rpp40	50	39.773	ENSPCAG00000002700	-	95	39.773	Procavia_capensis
ENSTRUG00000003755	rpp40	98	40.510	ENSPCOG00000003907	RPP40	97	40.510	Propithecus_coquereli
ENSTRUG00000003755	rpp40	98	39.660	ENSPVAG00000011325	RPP40	97	39.660	Pteropus_vampyrus
ENSTRUG00000003755	rpp40	84	64.765	ENSPNYG00000004432	rpp40	100	65.772	Pundamilia_nyererei
ENSTRUG00000003755	rpp40	98	46.875	ENSPNAG00000019125	rpp40	98	46.875	Pygocentrus_nattereri
ENSTRUG00000003755	rpp40	99	40.336	ENSRNOG00000016226	Rpp40	98	41.275	Rattus_norvegicus
ENSTRUG00000003755	rpp40	98	38.810	ENSRBIG00000035800	RPP40	98	39.597	Rhinopithecus_bieti
ENSTRUG00000003755	rpp40	98	38.810	ENSRROG00000039116	RPP40	97	38.810	Rhinopithecus_roxellana
ENSTRUG00000003755	rpp40	98	38.810	ENSSBOG00000020297	RPP40	97	38.810	Saimiri_boliviensis_boliviensis
ENSTRUG00000003755	rpp40	76	39.051	ENSSHAG00000002102	RPP40	99	39.051	Sarcophilus_harrisii
ENSTRUG00000003755	rpp40	98	48.011	ENSSFOG00015001142	rpp40	79	48.011	Scleropages_formosus
ENSTRUG00000003755	rpp40	99	73.864	ENSSDUG00000007202	rpp40	99	73.864	Seriola_dumerili
ENSTRUG00000003755	rpp40	99	73.864	ENSSLDG00000017563	rpp40	99	73.864	Seriola_lalandi_dorsalis
ENSTRUG00000003755	rpp40	82	37.288	ENSSPUG00000018950	-	100	37.288	Sphenodon_punctatus
ENSTRUG00000003755	rpp40	98	39.093	ENSSPUG00000017487	-	97	39.093	Sphenodon_punctatus
ENSTRUG00000003755	rpp40	99	71.307	ENSSPAG00000022716	rpp40	99	71.714	Stegastes_partitus
ENSTRUG00000003755	rpp40	98	40.793	ENSSSCG00000000998	RPP40	99	40.728	Sus_scrofa
ENSTRUG00000003755	rpp40	99	38.936	ENSTGUG00000002258	-	99	38.936	Taeniopygia_guttata
ENSTRUG00000003755	rpp40	100	78.187	ENSTNIG00000003077	rpp40	99	78.187	Tetraodon_nigroviridis
ENSTRUG00000003755	rpp40	98	34.844	ENSTTRG00000007319	RPP40	98	34.844	Tursiops_truncatus
ENSTRUG00000003755	rpp40	98	39.943	ENSUAMG00000002159	RPP40	98	40.268	Ursus_americanus
ENSTRUG00000003755	rpp40	98	39.943	ENSUMAG00000018639	RPP40	91	39.943	Ursus_maritimus
ENSTRUG00000003755	rpp40	98	39.660	ENSVVUG00000005451	RPP40	97	39.660	Vulpes_vulpes
ENSTRUG00000003755	rpp40	98	38.983	ENSXETG00000017617	rpp40	98	38.983	Xenopus_tropicalis
ENSTRUG00000003755	rpp40	55	61.644	ENSXCOG00000019991	-	52	73.684	Xiphophorus_couchianus
ENSTRUG00000003755	rpp40	99	46.875	ENSXMAG00000024940	rpp40	98	47.443	Xiphophorus_maculatus