EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTRUG00000003783 (Gene tree)
Gene ID: 101075240
Gene Symbol: sfpq
Alias: hm:zeh0027|wis|wu:fa11h12|wu:fd10f03|zgc:85935
Full Name: splicing factor proline and glutamine rich
Gene Type: protein_coding
Species: Takifugu_rubripes
Status: putative
Strand: Minus strand
Length: 16908 bases
Position: chr12:486190-503097
Accession: 101075240
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTRUP00000008897	RRM_1	PF00076.22	3e-30	1	2
ENSTRUP00000008897	RRM_1	PF00076.22	3e-30	2	2
ENSTRUP00000055844	RRM_1	PF00076.22	3.2e-30	1	2
ENSTRUP00000055844	RRM_1	PF00076.22	3.2e-30	2	2
ENSTRUP00000008896	RRM_1	PF00076.22	3.3e-30	1	2
ENSTRUP00000008896	RRM_1	PF00076.22	3.3e-30	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTRUT00000056713	-	3590	-	ENSTRUP00000055844	646 (aa)	-	-
ENSTRUT00000008948	-	1986	XM_011608842	ENSTRUP00000008896	661 (aa)	XP_011607144	H2S920
ENSTRUT00000008949	-	1896	XM_011608843	ENSTRUP00000008897	631 (aa)	XP_011607145	H2S921

Gene Model

Click here to download ENSTRUG00000003783's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTRUG00000003783's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTRUG00000003783	sfpq	59	54.692	ENSTRUG00000011335	pspc1	88	50.976
ENSTRUG00000003783	sfpq	55	62.931	ENSTRUG00000005554	nono	93	58.588

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTRUG00000003783	sfpq	62	76.092	ENSG00000116560	SFPQ	99	69.820	Homo_sapiens
ENSTRUG00000003783	sfpq	69	84.698	ENSAPOG00000024257	sfpq	100	76.058	Acanthochromis_polyacanthus
ENSTRUG00000003783	sfpq	62	76.092	ENSAMEG00000000815	SFPQ	99	75.402	Ailuropoda_melanoleuca
ENSTRUG00000003783	sfpq	94	81.038	ENSACIG00000000905	sfpq	100	71.245	Amphilophus_citrinellus
ENSTRUG00000003783	sfpq	70	84.322	ENSAOCG00000002889	sfpq	100	71.827	Amphiprion_ocellaris
ENSTRUG00000003783	sfpq	70	84.322	ENSAPEG00000016556	sfpq	100	71.827	Amphiprion_percula
ENSTRUG00000003783	sfpq	100	75.704	ENSATEG00000002981	sfpq	100	75.111	Anabas_testudineus
ENSTRUG00000003783	sfpq	50	56.734	ENSANAG00000037798	-	99	56.447	Aotus_nancymaae
ENSTRUG00000003783	sfpq	50	55.085	ENSANAG00000021268	-	100	54.571	Aotus_nancymaae
ENSTRUG00000003783	sfpq	59	68.382	ENSANAG00000027438	-	64	66.751	Aotus_nancymaae
ENSTRUG00000003783	sfpq	100	73.730	ENSACLG00000022332	sfpq	100	72.493	Astatotilapia_calliptera
ENSTRUG00000003783	sfpq	64	80.046	ENSAMXG00000011538	sfpq	99	62.391	Astyanax_mexicanus
ENSTRUG00000003783	sfpq	62	76.092	ENSBTAG00000016328	SFPQ	62	75.402	Bos_taurus
ENSTRUG00000003783	sfpq	62	76.092	ENSCJAG00000001431	SFPQ	85	56.607	Callithrix_jacchus
ENSTRUG00000003783	sfpq	60	73.077	ENSCAFG00000017608	-	78	60.413	Canis_familiaris
ENSTRUG00000003783	sfpq	62	73.721	ENSCAFG00000018271	-	65	71.889	Canis_familiaris
ENSTRUG00000003783	sfpq	62	76.092	ENSCAFG00000003595	-	66	75.402	Canis_familiaris
ENSTRUG00000003783	sfpq	62	73.721	ENSCAFG00020004881	-	65	71.889	Canis_lupus_dingo
ENSTRUG00000003783	sfpq	50	70.349	ENSCAFG00020010702	-	100	70.640	Canis_lupus_dingo
ENSTRUG00000003783	sfpq	62	76.092	ENSCHIG00000023097	SFPQ	61	75.402	Capra_hircus
ENSTRUG00000003783	sfpq	50	74.929	ENSTSYG00000037120	-	100	74.074	Carlito_syrichta
ENSTRUG00000003783	sfpq	50	67.143	ENSCPOG00000015018	-	100	65.565	Cavia_porcellus
ENSTRUG00000003783	sfpq	62	76.092	ENSCCAG00000029361	-	92	57.927	Cebus_capucinus
ENSTRUG00000003783	sfpq	53	80.712	ENSCATG00000036179	-	89	54.708	Cercocebus_atys
ENSTRUG00000003783	sfpq	62	52.036	ENSCATG00000032664	-	91	40.841	Cercocebus_atys
ENSTRUG00000003783	sfpq	50	74.929	ENSCLAG00000009583	-	100	74.074	Chinchilla_lanigera
ENSTRUG00000003783	sfpq	62	76.092	ENSCSAG00000001082	SFPQ	85	56.634	Chlorocebus_sabaeus
ENSTRUG00000003783	sfpq	54	74.737	ENSCHOG00000009131	SFPQ	100	73.947	Choloepus_hoffmanni
ENSTRUG00000003783	sfpq	62	75.806	ENSCPBG00000018674	SFPQ	92	60.768	Chrysemys_picta_bellii
ENSTRUG00000003783	sfpq	50	74.929	ENSCANG00000028087	-	100	74.074	Colobus_angolensis_palliatus
ENSTRUG00000003783	sfpq	64	75.450	ENSCGRG00001011698	Sfpq	63	74.607	Cricetulus_griseus_chok1gshd
ENSTRUG00000003783	sfpq	62	76.690	ENSCGRG00000010128	Sfpq	95	76.047	Cricetulus_griseus_crigri
ENSTRUG00000003783	sfpq	100	69.163	ENSCSEG00000007852	sfpq	100	64.972	Cynoglossus_semilaevis
ENSTRUG00000003783	sfpq	100	63.200	ENSCVAG00000019538	sfpq	100	64.533	Cyprinodon_variegatus
ENSTRUG00000003783	sfpq	63	79.577	ENSDARG00000011564	sfpq	100	89.565	Danio_rerio
ENSTRUG00000003783	sfpq	62	76.092	ENSDNOG00000049454	SFPQ	98	55.683	Dasypus_novemcinctus
ENSTRUG00000003783	sfpq	62	70.465	ENSETEG00000001095	SFPQ	61	66.520	Echinops_telfairi
ENSTRUG00000003783	sfpq	62	76.092	ENSEASG00005012012	SFPQ	88	55.745	Equus_asinus_asinus
ENSTRUG00000003783	sfpq	62	76.092	ENSECAG00000000642	SFPQ	88	55.745	Equus_caballus
ENSTRUG00000003783	sfpq	64	79.954	ENSELUG00000023145	sfpq	96	61.997	Esox_lucius
ENSTRUG00000003783	sfpq	62	76.092	ENSFCAG00000042862	SFPQ	95	57.919	Felis_catus
ENSTRUG00000003783	sfpq	50	74.644	ENSFALG00000000731	SFPQ	100	73.504	Ficedula_albicollis
ENSTRUG00000003783	sfpq	50	66.006	ENSFDAG00000017723	-	100	68.182	Fukomys_damarensis
ENSTRUG00000003783	sfpq	100	63.818	ENSFHEG00000015200	sfpq	100	63.249	Fundulus_heteroclitus
ENSTRUG00000003783	sfpq	64	84.075	ENSGMOG00000011957	sfpq	99	65.185	Gadus_morhua
ENSTRUG00000003783	sfpq	81	86.667	ENSGMOG00000011950	SFPQ	99	86.905	Gadus_morhua
ENSTRUG00000003783	sfpq	100	68.652	ENSGAFG00000014571	sfpq	100	64.869	Gambusia_affinis
ENSTRUG00000003783	sfpq	100	74.963	ENSGACG00000002034	sfpq	100	74.667	Gasterosteus_aculeatus
ENSTRUG00000003783	sfpq	62	76.744	ENSGGOG00000026354	SFPQ	100	74.074	Gorilla_gorilla
ENSTRUG00000003783	sfpq	100	73.585	ENSHBUG00000016818	sfpq	100	72.350	Haplochromis_burtoni
ENSTRUG00000003783	sfpq	62	75.571	ENSHGLG00000012001	SFPQ	98	54.930	Heterocephalus_glaber_female
ENSTRUG00000003783	sfpq	50	74.929	ENSHGLG00100004136	-	100	74.074	Heterocephalus_glaber_male
ENSTRUG00000003783	sfpq	87	82.703	ENSHCOG00000008612	sfpq	100	79.562	Hippocampus_comes
ENSTRUG00000003783	sfpq	65	79.499	ENSIPUG00000013076	SFPQ	74	79.499	Ictalurus_punctatus
ENSTRUG00000003783	sfpq	50	74.929	ENSSTOG00000014004	-	100	74.074	Ictidomys_tridecemlineatus
ENSTRUG00000003783	sfpq	62	76.147	ENSJJAG00000015633	Sfpq	62	75.172	Jaculus_jaculus
ENSTRUG00000003783	sfpq	100	76.680	ENSKMAG00000000238	sfpq	90	72.447	Kryptolebias_marmoratus
ENSTRUG00000003783	sfpq	100	70.935	ENSLBEG00000003163	sfpq	98	73.039	Labrus_bergylta
ENSTRUG00000003783	sfpq	62	76.267	ENSLACG00000014728	SFPQ	90	63.492	Latimeria_chalumnae
ENSTRUG00000003783	sfpq	62	80.186	ENSLOCG00000001067	sfpq	69	81.912	Lepisosteus_oculatus
ENSTRUG00000003783	sfpq	62	75.862	ENSLAFG00000015951	SFPQ	69	75.172	Loxodonta_africana
ENSTRUG00000003783	sfpq	62	76.092	ENSMNEG00000038895	SFPQ	85	56.260	Macaca_nemestrina
ENSTRUG00000003783	sfpq	50	72.365	ENSMLEG00000010643	-	100	71.510	Mandrillus_leucophaeus
ENSTRUG00000003783	sfpq	100	75.037	ENSMAMG00000007875	sfpq	100	76.844	Mastacembelus_armatus
ENSTRUG00000003783	sfpq	100	76.820	ENSMZEG00005026091	sfpq	100	73.333	Maylandia_zebra
ENSTRUG00000003783	sfpq	51	78.806	ENSMGAG00000004237	SFPQ	100	72.634	Meleagris_gallopavo
ENSTRUG00000003783	sfpq	62	76.092	ENSMICG00000027265	SFPQ	84	56.863	Microcebus_murinus
ENSTRUG00000003783	sfpq	64	72.748	ENSMOCG00000019075	Sfpq	92	72.072	Microtus_ochrogaster
ENSTRUG00000003783	sfpq	100	79.495	ENSMMOG00000001074	sfpq	100	76.401	Mola_mola
ENSTRUG00000003783	sfpq	62	76.037	ENSMODG00000017937	SFPQ	64	75.115	Monodelphis_domestica
ENSTRUG00000003783	sfpq	100	75.112	ENSMALG00000010381	sfpq	100	75.708	Monopterus_albus
ENSTRUG00000003783	sfpq	62	76.092	MGP_CAROLIEiJ_G0026487	Sfpq	62	75.402	Mus_caroli
ENSTRUG00000003783	sfpq	62	76.092	ENSMUSG00000028820	Sfpq	62	75.402	Mus_musculus
ENSTRUG00000003783	sfpq	62	76.092	MGP_PahariEiJ_G0028818	Sfpq	62	75.402	Mus_pahari
ENSTRUG00000003783	sfpq	62	76.092	MGP_SPRETEiJ_G0027466	Sfpq	62	75.402	Mus_spretus
ENSTRUG00000003783	sfpq	62	76.744	ENSMLUG00000027090	SFPQ	96	76.047	Myotis_lucifugus
ENSTRUG00000003783	sfpq	100	76.374	ENSNBRG00000017479	sfpq	100	73.623	Neolamprologus_brichardi
ENSTRUG00000003783	sfpq	50	74.929	ENSNLEG00000035521	-	100	74.074	Nomascus_leucogenys
ENSTRUG00000003783	sfpq	62	76.212	ENSMEUG00000014082	SFPQ	62	75.289	Notamacropus_eugenii
ENSTRUG00000003783	sfpq	63	75.973	ENSOPRG00000013696	SFPQ	62	75.286	Ochotona_princeps
ENSTRUG00000003783	sfpq	60	68.052	ENSODEG00000005485	SFPQ	76	66.106	Octodon_degus
ENSTRUG00000003783	sfpq	100	75.185	ENSONIG00000017737	sfpq	99	72.046	Oreochromis_niloticus
ENSTRUG00000003783	sfpq	50	75.429	ENSOANG00000008789	-	100	74.571	Ornithorhynchus_anatinus
ENSTRUG00000003783	sfpq	62	76.092	ENSOCUG00000001877	SFPQ	86	75.402	Oryctolagus_cuniculus
ENSTRUG00000003783	sfpq	100	66.620	ENSORLG00000007459	sfpq	100	67.034	Oryzias_latipes
ENSTRUG00000003783	sfpq	100	67.956	ENSORLG00020011818	sfpq	100	69.061	Oryzias_latipes_hni
ENSTRUG00000003783	sfpq	100	67.862	ENSORLG00015002131	sfpq	100	68.828	Oryzias_latipes_hsok
ENSTRUG00000003783	sfpq	100	66.667	ENSOMEG00000018020	sfpq	100	67.663	Oryzias_melastigma
ENSTRUG00000003783	sfpq	62	76.322	ENSOGAG00000027710	SFPQ	82	75.402	Otolemur_garnettii
ENSTRUG00000003783	sfpq	62	76.744	ENSOARG00000019439	SFPQ	66	76.047	Ovis_aries
ENSTRUG00000003783	sfpq	62	76.092	ENSPPAG00000030078	SFPQ	61	75.402	Pan_paniscus
ENSTRUG00000003783	sfpq	50	74.716	ENSPPRG00000015478	-	100	73.864	Panthera_pardus
ENSTRUG00000003783	sfpq	50	74.929	ENSPTIG00000007710	-	100	74.074	Panthera_tigris_altaica
ENSTRUG00000003783	sfpq	62	70.345	ENSPTRG00000000518	SFPQ	60	69.655	Pan_troglodytes
ENSTRUG00000003783	sfpq	62	76.147	ENSPANG00000005380	SFPQ	65	75.402	Papio_anubis
ENSTRUG00000003783	sfpq	62	81.882	ENSPKIG00000023035	sfpq	73	82.588	Paramormyrops_kingsleyae
ENSTRUG00000003783	sfpq	62	77.209	ENSPSIG00000011494	SFPQ	99	75.814	Pelodiscus_sinensis
ENSTRUG00000003783	sfpq	100	63.034	ENSPMGG00000023883	sfpq	100	63.111	Periophthalmus_magnuspinnatus
ENSTRUG00000003783	sfpq	64	75.450	ENSPEMG00000009794	Sfpq	92	74.607	Peromyscus_maniculatus_bairdii
ENSTRUG00000003783	sfpq	52	71.472	ENSPMAG00000005583	sfpq	100	57.055	Petromyzon_marinus
ENSTRUG00000003783	sfpq	62	76.037	ENSPCIG00000000923	SFPQ	62	75.115	Phascolarctos_cinereus
ENSTRUG00000003783	sfpq	100	65.127	ENSPFOG00000003127	sfpq	100	64.912	Poecilia_formosa
ENSTRUG00000003783	sfpq	100	66.667	ENSPREG00000008060	sfpq	100	65.928	Poecilia_reticulata
ENSTRUG00000003783	sfpq	62	76.092	ENSPPYG00000001560	SFPQ	85	56.260	Pongo_abelii
ENSTRUG00000003783	sfpq	61	76.224	ENSPCAG00000006164	SFPQ	60	75.524	Procavia_capensis
ENSTRUG00000003783	sfpq	62	76.092	ENSPCOG00000027127	SFPQ	90	58.491	Propithecus_coquereli
ENSTRUG00000003783	sfpq	100	72.453	ENSPNYG00000007494	sfpq	100	71.388	Pundamilia_nyererei
ENSTRUG00000003783	sfpq	64	80.046	ENSPNAG00000002128	sfpq	72	81.368	Pygocentrus_nattereri
ENSTRUG00000003783	sfpq	60	71.462	ENSRBIG00000035286	SFPQ	100	74.074	Rhinopithecus_bieti
ENSTRUG00000003783	sfpq	62	76.092	ENSRROG00000040992	SFPQ	100	74.074	Rhinopithecus_roxellana
ENSTRUG00000003783	sfpq	50	74.929	ENSSBOG00000024972	-	100	74.074	Saimiri_boliviensis_boliviensis
ENSTRUG00000003783	sfpq	59	78.646	ENSSHAG00000016107	-	96	72.036	Sarcophilus_harrisii
ENSTRUG00000003783	sfpq	50	72.779	ENSSHAG00000012312	-	100	70.774	Sarcophilus_harrisii
ENSTRUG00000003783	sfpq	71	76.907	ENSSFOG00015009289	sfpq	81	81.306	Scleropages_formosus
ENSTRUG00000003783	sfpq	100	75.334	ENSSMAG00000018201	sfpq	100	74.963	Scophthalmus_maximus
ENSTRUG00000003783	sfpq	100	77.071	ENSSDUG00000008402	sfpq	100	77.367	Seriola_dumerili
ENSTRUG00000003783	sfpq	100	76.696	ENSSLDG00000018917	sfpq	100	76.696	Seriola_lalandi_dorsalis
ENSTRUG00000003783	sfpq	52	76.087	ENSSARG00000006409	SFPQ	100	75.272	Sorex_araneus
ENSTRUG00000003783	sfpq	100	77.400	ENSSPAG00000016550	sfpq	100	78.877	Stegastes_partitus
ENSTRUG00000003783	sfpq	62	76.092	ENSSSCG00000035690	SFPQ	95	57.681	Sus_scrofa
ENSTRUG00000003783	sfpq	62	76.512	ENSTGUG00000001722	SFPQ	99	75.581	Taeniopygia_guttata
ENSTRUG00000003783	sfpq	87	88.205	ENSTNIG00000011331	sfpq	100	88.399	Tetraodon_nigroviridis
ENSTRUG00000003783	sfpq	50	72.650	ENSUMAG00000008056	-	100	71.795	Ursus_maritimus
ENSTRUG00000003783	sfpq	50	68.986	ENSVVUG00000000874	-	100	67.049	Vulpes_vulpes
ENSTRUG00000003783	sfpq	57	77.159	ENSXETG00000009682	sfpq	100	75.155	Xenopus_tropicalis
ENSTRUG00000003783	sfpq	99	66.914	ENSXMAG00000016391	sfpq	99	66.618	Xiphophorus_maculatus