EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTRUG00000003829 (Gene tree)
Gene ID: 101078197
Gene Symbol: -
Alias: -
Full Name: RNA-binding Raly-like protein
Gene Type: protein_coding
Species: Takifugu_rubripes
Status: putative
Strand: Plus strand
Length: 19247 bases
Position: chr22:3212122-3231368
Accession: 101078197
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTRUP00000009028	RRM_1	PF00076.22	1.7e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTRUT00000009081	-	855	XM_011616208	ENSTRUP00000009028	284 (aa)	XP_011614510	H2S9F2

Gene Model

Click here to download ENSTRUG00000003829's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTRUG00000003829's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTRUG00000003829	-	73	53.774	ENSTRUG00000020158	-	73	53.125

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTRUG00000003829	-	97	85.714	ENSAPOG00000008744	-	97	88.339	Acanthochromis_polyacanthus
ENSTRUG00000003829	-	98	86.411	ENSACIG00000007143	-	99	86.411	Amphilophus_citrinellus
ENSTRUG00000003829	-	95	71.378	ENSAOCG00000001605	-	82	75.732	Amphiprion_ocellaris
ENSTRUG00000003829	-	95	87.986	ENSAOCG00000023599	-	97	89.753	Amphiprion_ocellaris
ENSTRUG00000003829	-	80	73.191	ENSATEG00000023356	-	93	73.444	Anabas_testudineus
ENSTRUG00000003829	-	100	78.502	ENSATEG00000022219	-	97	83.388	Anabas_testudineus
ENSTRUG00000003829	-	95	71.731	ENSACLG00000006949	-	83	74.486	Astatotilapia_calliptera
ENSTRUG00000003829	-	95	87.589	ENSACLG00000011720	-	97	89.007	Astatotilapia_calliptera
ENSTRUG00000003829	-	99	62.799	ENSAMXG00000032617	-	96	63.140	Astyanax_mexicanus
ENSTRUG00000003829	-	95	72.085	ENSAMXG00000019031	-	82	76.151	Astyanax_mexicanus
ENSTRUG00000003829	-	95	75.265	ENSCSEG00000014237	-	98	72.474	Cynoglossus_semilaevis
ENSTRUG00000003829	-	95	85.512	ENSCVAG00000013624	-	97	87.633	Cyprinodon_variegatus
ENSTRUG00000003829	-	95	71.025	ENSCVAG00000018104	-	82	75.417	Cyprinodon_variegatus
ENSTRUG00000003829	-	60	76.023	ENSDARG00000090292	ralyl	81	79.012	Danio_rerio
ENSTRUG00000003829	-	92	61.314	ENSELUG00000001702	-	94	62.800	Esox_lucius
ENSTRUG00000003829	-	58	72.121	ENSGMOG00000005914	-	100	72.121	Gadus_morhua
ENSTRUG00000003829	-	64	75.824	ENSGACG00000004991	-	91	80.723	Gasterosteus_aculeatus
ENSTRUG00000003829	-	95	71.378	ENSHBUG00000015412	-	82	75.314	Haplochromis_burtoni
ENSTRUG00000003829	-	95	87.279	ENSHBUG00000010040	-	97	89.046	Haplochromis_burtoni
ENSTRUG00000003829	-	95	72.438	ENSIPUG00000000507	ralyl	82	77.406	Ictalurus_punctatus
ENSTRUG00000003829	-	95	71.025	ENSKMAG00000018155	-	82	75.732	Kryptolebias_marmoratus
ENSTRUG00000003829	-	95	82.686	ENSKMAG00000022093	-	87	88.000	Kryptolebias_marmoratus
ENSTRUG00000003829	-	99	82.993	ENSLBEG00000012873	-	99	82.993	Labrus_bergylta
ENSTRUG00000003829	-	95	71.277	ENSLBEG00000011011	-	82	76.050	Labrus_bergylta
ENSTRUG00000003829	-	95	72.202	ENSLOCG00000012787	ralyl	81	76.395	Lepisosteus_oculatus
ENSTRUG00000003829	-	96	91.636	ENSMAMG00000001723	-	95	88.000	Mastacembelus_armatus
ENSTRUG00000003829	-	95	87.589	ENSMZEG00005024447	-	97	89.007	Maylandia_zebra
ENSTRUG00000003829	-	95	68.990	ENSMZEG00005018748	-	83	74.486	Maylandia_zebra
ENSTRUG00000003829	-	100	77.670	ENSMMOG00000020441	-	88	81.908	Mola_mola
ENSTRUG00000003829	-	90	70.787	ENSMALG00000012952	-	82	74.477	Monopterus_albus
ENSTRUG00000003829	-	95	85.866	ENSMALG00000019019	-	76	87.279	Monopterus_albus
ENSTRUG00000003829	-	98	86.063	ENSNBRG00000011206	-	99	86.063	Neolamprologus_brichardi
ENSTRUG00000003829	-	95	68.750	ENSNBRG00000011376	-	83	74.180	Neolamprologus_brichardi
ENSTRUG00000003829	-	95	81.272	ENSORLG00000017934	-	97	81.979	Oryzias_latipes
ENSTRUG00000003829	-	95	72.340	ENSORLG00000012719	-	82	76.987	Oryzias_latipes
ENSTRUG00000003829	-	95	80.919	ENSORLG00020000082	-	97	81.979	Oryzias_latipes_hni
ENSTRUG00000003829	-	94	73.477	ENSORLG00020004438	-	82	76.987	Oryzias_latipes_hni
ENSTRUG00000003829	-	90	80.524	ENSORLG00015004280	-	85	82.000	Oryzias_latipes_hsok
ENSTRUG00000003829	-	95	72.438	ENSORLG00015004727	-	82	77.406	Oryzias_latipes_hsok
ENSTRUG00000003829	-	95	71.378	ENSOMEG00000001170	-	89	72.477	Oryzias_melastigma
ENSTRUG00000003829	-	90	79.775	ENSOMEG00000011821	-	97	81.979	Oryzias_melastigma
ENSTRUG00000003829	-	95	70.000	ENSPKIG00000015926	-	83	73.333	Paramormyrops_kingsleyae
ENSTRUG00000003829	-	95	78.495	ENSPMGG00000009532	-	85	81.967	Periophthalmus_magnuspinnatus
ENSTRUG00000003829	-	76	66.228	ENSPMGG00000014481	-	95	67.401	Periophthalmus_magnuspinnatus
ENSTRUG00000003829	-	95	82.653	ENSPFOG00000006120	-	99	84.014	Poecilia_formosa
ENSTRUG00000003829	-	95	70.979	ENSPLAG00000011323	ralyl	85	75.207	Poecilia_latipinna
ENSTRUG00000003829	-	97	78.125	ENSPLAG00000009877	-	77	79.514	Poecilia_latipinna
ENSTRUG00000003829	-	95	70.979	ENSPMEG00000023847	ralyl	85	75.207	Poecilia_mexicana
ENSTRUG00000003829	-	97	78.125	ENSPMEG00000013624	-	80	79.514	Poecilia_mexicana
ENSTRUG00000003829	-	95	71.479	ENSPREG00000001956	ralyl	85	77.083	Poecilia_reticulata
ENSTRUG00000003829	-	97	86.063	ENSPREG00000013805	-	97	81.848	Poecilia_reticulata
ENSTRUG00000003829	-	98	86.063	ENSPNYG00000008772	-	99	86.063	Pundamilia_nyererei
ENSTRUG00000003829	-	95	68.990	ENSPNYG00000003548	-	83	74.486	Pundamilia_nyererei
ENSTRUG00000003829	-	95	71.631	ENSPNAG00000000498	-	72	76.471	Pygocentrus_nattereri
ENSTRUG00000003829	-	90	67.557	ENSPNAG00000026098	-	85	69.388	Pygocentrus_nattereri
ENSTRUG00000003829	-	95	71.579	ENSSFOG00015009401	-	82	77.178	Scleropages_formosus
ENSTRUG00000003829	-	95	66.071	ENSSFOG00015004575	-	81	68.776	Scleropages_formosus
ENSTRUG00000003829	-	95	70.318	ENSSMAG00000005608	-	82	74.477	Scophthalmus_maximus
ENSTRUG00000003829	-	100	86.014	ENSSMAG00000015907	-	97	82.168	Scophthalmus_maximus
ENSTRUG00000003829	-	95	71.025	ENSSDUG00000007587	-	82	75.732	Seriola_dumerili
ENSTRUG00000003829	-	98	86.254	ENSSDUG00000012473	-	97	90.106	Seriola_dumerili
ENSTRUG00000003829	-	95	87.279	ENSSLDG00000011534	-	97	89.753	Seriola_lalandi_dorsalis
ENSTRUG00000003829	-	95	70.423	ENSSLDG00000020603	-	82	74.583	Seriola_lalandi_dorsalis
ENSTRUG00000003829	-	100	80.282	ENSSPAG00000013858	-	98	77.663	Stegastes_partitus
ENSTRUG00000003829	-	97	87.762	ENSTNIG00000005594	-	100	86.014	Tetraodon_nigroviridis
ENSTRUG00000003829	-	95	65.950	ENSXETG00000017729	ralyl	78	73.684	Xenopus_tropicalis
ENSTRUG00000003829	-	96	69.492	ENSXCOG00000015156	-	79	72.400	Xiphophorus_couchianus
ENSTRUG00000003829	-	96	72.183	ENSXMAG00000008396	-	82	76.569	Xiphophorus_maculatus
ENSTRUG00000003829	-	95	86.219	ENSXMAG00000007614	-	97	87.986	Xiphophorus_maculatus