EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSTRUG00000003939 (Gene tree)
Gene ID: 101078881
Gene Symbol: ptcd3
Alias: fa08d08|wu:fa08d08|zgc:123014
Full Name: pentatricopeptide repeat domain 3
Gene Type: protein_coding
Species: Takifugu_rubripes
Status: putative
Strand: Plus strand
Length: 9373 bases
Position: chrHE591614.1:249782-259154
Accession: 101078881
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTRUP00000009324	PPR	PF01535.20	6e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTRUT00000009379	-	3228	XM_011618108	ENSTRUP00000009324	652 (aa)	XP_011616410	H2SA98

Gene Model

Click here to download ENSTRUG00000003939's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTRUG00000003939's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTRUG00000003939	ptcd3	92	65.472	ENSACIG00000022263	ptcd3	99	65.472	Amphilophus_citrinellus
ENSTRUG00000003939	ptcd3	100	62.388	ENSAOCG00000017186	ptcd3	98	62.388	Amphiprion_ocellaris
ENSTRUG00000003939	ptcd3	100	62.481	ENSAPEG00000016069	ptcd3	98	62.481	Amphiprion_percula
ENSTRUG00000003939	ptcd3	89	47.368	ENSAPLG00000005086	PTCD3	97	47.368	Anas_platyrhynchos
ENSTRUG00000003939	ptcd3	100	64.820	ENSACLG00000020653	ptcd3	100	64.820	Astatotilapia_calliptera
ENSTRUG00000003939	ptcd3	96	56.625	ENSAMXG00000011570	ptcd3	95	56.625	Astyanax_mexicanus
ENSTRUG00000003939	ptcd3	98	63.526	ENSCVAG00000020820	ptcd3	98	65.894	Cyprinodon_variegatus
ENSTRUG00000003939	ptcd3	87	62.917	ENSGAFG00000015291	ptcd3	94	63.093	Gambusia_affinis
ENSTRUG00000003939	ptcd3	100	65.120	ENSHBUG00000020056	ptcd3	100	65.120	Haplochromis_burtoni
ENSTRUG00000003939	ptcd3	99	62.500	ENSLBEG00000015349	ptcd3	99	62.500	Labrus_bergylta
ENSTRUG00000003939	ptcd3	100	64.970	ENSMZEG00005004980	ptcd3	100	64.970	Maylandia_zebra
ENSTRUG00000003939	ptcd3	93	43.252	ENSMGAG00000013124	PTCD3	99	43.790	Meleagris_gallopavo
ENSTRUG00000003939	ptcd3	100	63.827	ENSMALG00000013282	ptcd3	100	63.827	Monopterus_albus
ENSTRUG00000003939	ptcd3	91	63.606	ENSNBRG00000000447	ptcd3	100	63.606	Neolamprologus_brichardi
ENSTRUG00000003939	ptcd3	100	66.018	ENSONIG00000015886	ptcd3	100	66.018	Oreochromis_niloticus
ENSTRUG00000003939	ptcd3	99	63.872	ENSORLG00000008776	ptcd3	100	63.914	Oryzias_latipes
ENSTRUG00000003939	ptcd3	99	64.012	ENSORLG00020020676	ptcd3	99	63.609	Oryzias_latipes_hni
ENSTRUG00000003939	ptcd3	88	55.518	ENSORLG00015015978	ptcd3	99	55.500	Oryzias_latipes_hsok
ENSTRUG00000003939	ptcd3	98	63.354	ENSPFOG00000004442	ptcd3	100	63.354	Poecilia_formosa
ENSTRUG00000003939	ptcd3	90	61.306	ENSPLAG00000021401	ptcd3	99	61.783	Poecilia_latipinna
ENSTRUG00000003939	ptcd3	90	62.564	ENSPMEG00000007153	ptcd3	100	62.564	Poecilia_mexicana
ENSTRUG00000003939	ptcd3	97	50.769	ENSSFOG00015019643	ptcd3	97	51.623	Scleropages_formosus
ENSTRUG00000003939	ptcd3	82	50.464	ENSTGUG00000010760	PTCD3	100	50.464	Taeniopygia_guttata