EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSTRUG00000004074 (Gene tree)
Gene ID: 101072965
Gene Symbol: pum3
Alias: cb379|im:7148292|puf-A|sb:cb379|si:ch211-241o7.5
Full Name: pumilio RNA binding family member 3
Gene Type: protein_coding
Species: Takifugu_rubripes
Status: putative
Strand: Plus strand
Length: 9305 bases
Position: chrHE591675.1:259944-269248
Accession: 101072965
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTRUP00000009664	CPL	PF08144.11	3.8e-47	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTRUT00000009719	-	3532	XM_003977298	ENSTRUP00000009664	664 (aa)	XP_003977347	H2SB86

Gene Model

Click here to download ENSTRUG00000004074's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTRUG00000004074's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTRUG00000004074	pum3	79	62.786	ENSG00000080608	PUM3	96	55.673	Homo_sapiens
ENSTRUG00000004074	pum3	99	77.660	ENSAPOG00000020252	pum3	100	77.660	Acanthochromis_polyacanthus
ENSTRUG00000004074	pum3	79	62.524	ENSAMEG00000012187	PUM3	99	55.157	Ailuropoda_melanoleuca
ENSTRUG00000004074	pum3	85	78.584	ENSACIG00000009786	pum3	94	78.584	Amphilophus_citrinellus
ENSTRUG00000004074	pum3	99	78.267	ENSAOCG00000004439	pum3	100	78.267	Amphiprion_ocellaris
ENSTRUG00000004074	pum3	99	78.116	ENSAPEG00000020523	pum3	100	78.116	Amphiprion_percula
ENSTRUG00000004074	pum3	99	79.542	ENSATEG00000005799	pum3	99	80.000	Anabas_testudineus
ENSTRUG00000004074	pum3	80	62.121	ENSAPLG00000002920	PUM3	88	59.858	Anas_platyrhynchos
ENSTRUG00000004074	pum3	72	62.370	ENSACAG00000003174	PUM3	99	55.610	Anolis_carolinensis
ENSTRUG00000004074	pum3	79	63.359	ENSANAG00000024520	PUM3	96	56.555	Aotus_nancymaae
ENSTRUG00000004074	pum3	99	76.176	ENSACLG00000001017	pum3	100	76.176	Astatotilapia_calliptera
ENSTRUG00000004074	pum3	99	63.262	ENSAMXG00000020911	pum3	99	63.262	Astyanax_mexicanus
ENSTRUG00000004074	pum3	98	54.932	ENSBTAG00000013357	PUM3	96	55.387	Bos_taurus
ENSTRUG00000004074	pum3	79	62.595	ENSCJAG00000010917	PUM3	96	55.793	Callithrix_jacchus
ENSTRUG00000004074	pum3	79	62.524	ENSCAFG00000002035	PUM3	99	55.007	Canis_familiaris
ENSTRUG00000004074	pum3	79	62.524	ENSCAFG00020026867	PUM3	99	55.007	Canis_lupus_dingo
ENSTRUG00000004074	pum3	98	55.690	ENSCHIG00000021559	PUM3	96	56.146	Capra_hircus
ENSTRUG00000004074	pum3	99	53.731	ENSTSYG00000007481	PUM3	99	54.179	Carlito_syrichta
ENSTRUG00000004074	pum3	79	60.878	ENSCAPG00000010592	-	95	54.504	Cavia_aperea
ENSTRUG00000004074	pum3	98	55.963	ENSCPOG00000008552	-	95	55.963	Cavia_porcellus
ENSTRUG00000004074	pum3	79	62.524	ENSCCAG00000032650	PUM3	96	55.878	Cebus_capucinus
ENSTRUG00000004074	pum3	99	55.640	ENSCATG00000024880	PUM3	96	56.098	Cercocebus_atys
ENSTRUG00000004074	pum3	79	62.715	ENSCLAG00000011892	PUM3	95	55.725	Chinchilla_lanigera
ENSTRUG00000004074	pum3	79	62.595	ENSCSAG00000008691	PUM3	96	56.250	Chlorocebus_sabaeus
ENSTRUG00000004074	pum3	75	52.104	ENSCHOG00000002535	PUM3	73	52.104	Choloepus_hoffmanni
ENSTRUG00000004074	pum3	99	54.436	ENSCPBG00000025470	PUM3	95	54.887	Chrysemys_picta_bellii
ENSTRUG00000004074	pum3	82	38.710	ENSCING00000024199	-	99	38.710	Ciona_intestinalis
ENSTRUG00000004074	pum3	79	39.779	ENSCSAVG00000006072	-	99	39.583	Ciona_savignyi
ENSTRUG00000004074	pum3	79	62.786	ENSCANG00000006142	PUM3	96	55.945	Colobus_angolensis_palliatus
ENSTRUG00000004074	pum3	79	62.333	ENSCGRG00001016402	Pum3	98	55.605	Cricetulus_griseus_chok1gshd
ENSTRUG00000004074	pum3	79	62.333	ENSCGRG00000010207	Pum3	98	55.605	Cricetulus_griseus_crigri
ENSTRUG00000004074	pum3	88	74.619	ENSCSEG00000001565	pum3	99	74.619	Cynoglossus_semilaevis
ENSTRUG00000004074	pum3	70	71.329	ENSCVAG00000006550	pum3	100	71.329	Cyprinodon_variegatus
ENSTRUG00000004074	pum3	99	62.195	ENSDARG00000087779	pum3	99	62.195	Danio_rerio
ENSTRUG00000004074	pum3	99	46.418	ENSDNOG00000008157	PUM3	70	47.626	Dasypus_novemcinctus
ENSTRUG00000004074	pum3	79	61.759	ENSETEG00000015331	PUM3	84	60.179	Echinops_telfairi
ENSTRUG00000004074	pum3	78	40.377	ENSEBUG00000011586	pum3	78	40.377	Eptatretus_burgeri
ENSTRUG00000004074	pum3	79	63.168	ENSEASG00005010350	PUM3	96	56.667	Equus_asinus_asinus
ENSTRUG00000004074	pum3	79	63.168	ENSECAG00000017193	PUM3	96	56.667	Equus_caballus
ENSTRUG00000004074	pum3	92	49.351	ENSEEUG00000010314	PUM3	100	49.685	Erinaceus_europaeus
ENSTRUG00000004074	pum3	94	63.955	ENSELUG00000002215	pum3	94	63.955	Esox_lucius
ENSTRUG00000004074	pum3	99	55.000	ENSFALG00000010509	PUM3	99	55.000	Ficedula_albicollis
ENSTRUG00000004074	pum3	79	63.098	ENSFDAG00000021027	PUM3	95	56.031	Fukomys_damarensis
ENSTRUG00000004074	pum3	99	76.702	ENSFHEG00000015576	pum3	100	76.702	Fundulus_heteroclitus
ENSTRUG00000004074	pum3	80	71.805	ENSGMOG00000014217	pum3	99	71.805	Gadus_morhua
ENSTRUG00000004074	pum3	79	61.686	ENSGALG00000010178	PUM3	99	55.219	Gallus_gallus
ENSTRUG00000004074	pum3	54	76.374	ENSGAFG00000001930	pum3	62	76.374	Gambusia_affinis
ENSTRUG00000004074	pum3	82	82.904	ENSGACG00000017878	pum3	99	82.904	Gasterosteus_aculeatus
ENSTRUG00000004074	pum3	99	54.683	ENSGAGG00000018983	PUM3	99	55.136	Gopherus_agassizii
ENSTRUG00000004074	pum3	79	62.595	ENSGGOG00000006143	PUM3	96	55.758	Gorilla_gorilla
ENSTRUG00000004074	pum3	99	64.511	ENSHBUG00000012903	pum3	98	65.113	Haplochromis_burtoni
ENSTRUG00000004074	pum3	79	62.906	ENSHGLG00000015868	-	99	55.489	Heterocephalus_glaber_female
ENSTRUG00000004074	pum3	79	62.906	ENSHGLG00100018825	PUM3	99	55.489	Heterocephalus_glaber_male
ENSTRUG00000004074	pum3	99	72.378	ENSHCOG00000010306	pum3	100	73.512	Hippocampus_comes
ENSTRUG00000004074	pum3	99	62.500	ENSIPUG00000024801	pum3	99	62.861	Ictalurus_punctatus
ENSTRUG00000004074	pum3	99	55.758	ENSSTOG00000009586	PUM3	96	56.061	Ictidomys_tridecemlineatus
ENSTRUG00000004074	pum3	99	54.098	ENSJJAG00000012563	Pum3	99	54.098	Jaculus_jaculus
ENSTRUG00000004074	pum3	99	74.886	ENSKMAG00000010277	pum3	100	75.038	Kryptolebias_marmoratus
ENSTRUG00000004074	pum3	99	78.571	ENSLBEG00000012213	pum3	100	78.571	Labrus_bergylta
ENSTRUG00000004074	pum3	86	57.443	ENSLACG00000008312	PUM3	98	54.644	Latimeria_chalumnae
ENSTRUG00000004074	pum3	99	60.303	ENSLOCG00000012529	pum3	100	60.303	Lepisosteus_oculatus
ENSTRUG00000004074	pum3	97	55.008	ENSLAFG00000017341	PUM3	99	55.188	Loxodonta_africana
ENSTRUG00000004074	pum3	79	62.595	ENSMFAG00000001430	PUM3	96	56.250	Macaca_fascicularis
ENSTRUG00000004074	pum3	79	62.595	ENSMMUG00000002362	PUM3	94	56.250	Macaca_mulatta
ENSTRUG00000004074	pum3	79	62.595	ENSMNEG00000035288	PUM3	96	56.250	Macaca_nemestrina
ENSTRUG00000004074	pum3	79	62.595	ENSMLEG00000034820	PUM3	96	56.212	Mandrillus_leucophaeus
ENSTRUG00000004074	pum3	98	78.648	ENSMAMG00000022861	pum3	99	78.858	Mastacembelus_armatus
ENSTRUG00000004074	pum3	99	75.415	ENSMZEG00005014205	pum3	98	75.415	Maylandia_zebra
ENSTRUG00000004074	pum3	80	56.226	ENSMGAG00000002255	PUM3	95	50.228	Meleagris_gallopavo
ENSTRUG00000004074	pum3	79	61.759	ENSMAUG00000009733	Pum3	98	54.396	Mesocricetus_auratus
ENSTRUG00000004074	pum3	79	61.641	ENSMICG00000045916	PUM3	81	56.124	Microcebus_murinus
ENSTRUG00000004074	pum3	98	54.421	ENSMOCG00000014830	-	98	54.421	Microtus_ochrogaster
ENSTRUG00000004074	pum3	79	62.333	ENSMOCG00000019519	-	95	56.031	Microtus_ochrogaster
ENSTRUG00000004074	pum3	95	76.899	ENSMMOG00000012184	pum3	99	76.899	Mola_mola
ENSTRUG00000004074	pum3	79	61.217	ENSMODG00000015417	PUM3	74	61.236	Monodelphis_domestica
ENSTRUG00000004074	pum3	99	79.939	ENSMALG00000022164	pum3	93	79.939	Monopterus_albus
ENSTRUG00000004074	pum3	79	62.023	MGP_CAROLIEiJ_G0022845	Pum3	96	55.640	Mus_caroli
ENSTRUG00000004074	pum3	79	61.450	ENSMUSG00000041360	Pum3	96	55.335	Mus_musculus
ENSTRUG00000004074	pum3	79	61.641	MGP_PahariEiJ_G0014338	Pum3	96	55.758	Mus_pahari
ENSTRUG00000004074	pum3	79	61.450	MGP_SPRETEiJ_G0023763	Pum3	96	55.335	Mus_spretus
ENSTRUG00000004074	pum3	98	54.573	ENSMPUG00000005125	PUM3	96	54.573	Mustela_putorius_furo
ENSTRUG00000004074	pum3	99	54.066	ENSMLUG00000002309	PUM3	99	54.050	Myotis_lucifugus
ENSTRUG00000004074	pum3	79	59.351	ENSNGAG00000019468	Pum3	95	53.178	Nannospalax_galili
ENSTRUG00000004074	pum3	96	70.892	ENSNBRG00000021370	pum3	95	70.892	Neolamprologus_brichardi
ENSTRUG00000004074	pum3	79	62.786	ENSNLEG00000008712	PUM3	96	56.402	Nomascus_leucogenys
ENSTRUG00000004074	pum3	73	45.902	ENSMEUG00000013606	-	97	45.842	Notamacropus_eugenii
ENSTRUG00000004074	pum3	52	53.602	ENSOPRG00000004225	-	64	48.132	Ochotona_princeps
ENSTRUG00000004074	pum3	98	51.672	ENSODEG00000016477	-	95	51.672	Octodon_degus
ENSTRUG00000004074	pum3	79	63.671	ENSODEG00000003625	-	95	55.842	Octodon_degus
ENSTRUG00000004074	pum3	99	77.086	ENSONIG00000012733	pum3	100	77.086	Oreochromis_niloticus
ENSTRUG00000004074	pum3	79	59.351	ENSOANG00000014995	PUM3	99	57.932	Ornithorhynchus_anatinus
ENSTRUG00000004074	pum3	79	62.141	ENSOCUG00000004189	-	98	55.606	Oryctolagus_cuniculus
ENSTRUG00000004074	pum3	79	61.950	ENSOCUG00000026104	-	97	55.951	Oryctolagus_cuniculus
ENSTRUG00000004074	pum3	99	71.385	ENSORLG00000014935	pum3	100	71.385	Oryzias_latipes
ENSTRUG00000004074	pum3	99	70.928	ENSORLG00020002841	pum3	100	70.928	Oryzias_latipes_hni
ENSTRUG00000004074	pum3	99	71.233	ENSORLG00015015906	pum3	100	71.233	Oryzias_latipes_hsok
ENSTRUG00000004074	pum3	99	70.365	ENSOMEG00000009427	pum3	100	70.365	Oryzias_melastigma
ENSTRUG00000004074	pum3	77	46.887	ENSOGAG00000033481	-	88	44.894	Otolemur_garnettii
ENSTRUG00000004074	pum3	99	55.793	ENSOGAG00000008125	-	96	56.555	Otolemur_garnettii
ENSTRUG00000004074	pum3	98	55.842	ENSOARG00000013337	PUM3	96	56.297	Ovis_aries
ENSTRUG00000004074	pum3	79	62.595	ENSPPAG00000041337	PUM3	96	55.219	Pan_paniscus
ENSTRUG00000004074	pum3	79	62.906	ENSPPRG00000000809	PUM3	96	55.842	Panthera_pardus
ENSTRUG00000004074	pum3	79	63.480	ENSPTIG00000021934	PUM3	96	56.297	Panthera_tigris_altaica
ENSTRUG00000004074	pum3	79	62.786	ENSPTRG00000020735	PUM3	96	55.673	Pan_troglodytes
ENSTRUG00000004074	pum3	79	62.977	ENSPANG00000025118	PUM3	96	56.515	Papio_anubis
ENSTRUG00000004074	pum3	98	62.557	ENSPKIG00000022249	pum3	99	61.367	Paramormyrops_kingsleyae
ENSTRUG00000004074	pum3	95	56.094	ENSPSIG00000016272	PUM3	99	55.690	Pelodiscus_sinensis
ENSTRUG00000004074	pum3	74	75.506	ENSPMGG00000021261	pum3	99	75.506	Periophthalmus_magnuspinnatus
ENSTRUG00000004074	pum3	99	45.889	ENSPEMG00000019340	-	98	45.889	Peromyscus_maniculatus_bairdii
ENSTRUG00000004074	pum3	90	57.213	ENSPCIG00000030598	PUM3	80	57.213	Phascolarctos_cinereus
ENSTRUG00000004074	pum3	99	68.285	ENSPFOG00000001719	pum3	100	68.285	Poecilia_formosa
ENSTRUG00000004074	pum3	99	69.803	ENSPLAG00000020010	pum3	100	69.803	Poecilia_latipinna
ENSTRUG00000004074	pum3	99	69.954	ENSPMEG00000017451	pum3	100	69.954	Poecilia_mexicana
ENSTRUG00000004074	pum3	57	78.947	ENSPREG00000019478	-	69	78.947	Poecilia_reticulata
ENSTRUG00000004074	pum3	79	62.977	ENSPPYG00000019255	PUM3	96	56.061	Pongo_abelii
ENSTRUG00000004074	pum3	99	48.710	ENSPCAG00000005797	PUM3	95	48.729	Procavia_capensis
ENSTRUG00000004074	pum3	79	62.023	ENSPCOG00000027325	PUM3	94	56.192	Propithecus_coquereli
ENSTRUG00000004074	pum3	80	63.208	ENSPVAG00000016135	PUM3	78	63.109	Pteropus_vampyrus
ENSTRUG00000004074	pum3	99	76.408	ENSPNYG00000016124	pum3	100	76.408	Pundamilia_nyererei
ENSTRUG00000004074	pum3	99	59.726	ENSPNAG00000026524	pum3	99	60.182	Pygocentrus_nattereri
ENSTRUG00000004074	pum3	79	62.049	ENSRNOG00000048356	RGD1308750	96	55.793	Rattus_norvegicus
ENSTRUG00000004074	pum3	79	62.429	ENSRNOG00000012574	Pum3	96	56.098	Rattus_norvegicus
ENSTRUG00000004074	pum3	79	62.405	ENSRBIG00000036924	PUM3	96	55.640	Rhinopithecus_bieti
ENSTRUG00000004074	pum3	79	62.595	ENSRROG00000041089	PUM3	96	55.793	Rhinopithecus_roxellana
ENSTRUG00000004074	pum3	79	62.715	ENSSBOG00000028066	PUM3	96	56.183	Saimiri_boliviensis_boliviensis
ENSTRUG00000004074	pum3	99	54.751	ENSSHAG00000003730	PUM3	99	55.639	Sarcophilus_harrisii
ENSTRUG00000004074	pum3	97	62.287	ENSSFOG00015018778	pum3	98	62.287	Scleropages_formosus
ENSTRUG00000004074	pum3	99	76.453	ENSSMAG00000013236	pum3	99	79.514	Scophthalmus_maximus
ENSTRUG00000004074	pum3	99	80.360	ENSSDUG00000001887	pum3	99	80.660	Seriola_dumerili
ENSTRUG00000004074	pum3	99	81.942	ENSSLDG00000015766	pum3	99	81.942	Seriola_lalandi_dorsalis
ENSTRUG00000004074	pum3	86	53.500	ENSSARG00000000579	PUM3	97	53.459	Sorex_araneus
ENSTRUG00000004074	pum3	92	57.029	ENSSPUG00000001707	PUM3	99	54.925	Sphenodon_punctatus
ENSTRUG00000004074	pum3	99	76.444	ENSSPAG00000003976	pum3	100	76.596	Stegastes_partitus
ENSTRUG00000004074	pum3	97	55.814	ENSSSCG00000005227	PUM3	99	54.505	Sus_scrofa
ENSTRUG00000004074	pum3	95	55.365	ENSTGUG00000005339	PUM3	99	55.988	Taeniopygia_guttata
ENSTRUG00000004074	pum3	99	81.915	ENSTNIG00000010325	pum3	99	81.915	Tetraodon_nigroviridis
ENSTRUG00000004074	pum3	79	45.992	ENSTBEG00000013058	PUM3	85	45.053	Tupaia_belangeri
ENSTRUG00000004074	pum3	98	50.228	ENSTTRG00000001062	PUM3	92	50.683	Tursiops_truncatus
ENSTRUG00000004074	pum3	80	58.679	ENSUMAG00000018443	PUM3	99	58.679	Ursus_maritimus
ENSTRUG00000004074	pum3	99	54.030	ENSVPAG00000010766	PUM3	99	54.478	Vicugna_pacos
ENSTRUG00000004074	pum3	79	62.524	ENSVVUG00000006527	PUM3	99	55.007	Vulpes_vulpes
ENSTRUG00000004074	pum3	79	51.515	ENSXETG00000011707	pum3	99	47.289	Xenopus_tropicalis
ENSTRUG00000004074	pum3	94	68.277	ENSXCOG00000006725	pum3	100	68.277	Xiphophorus_couchianus
ENSTRUG00000004074	pum3	99	69.044	ENSXMAG00000002926	pum3	100	69.044	Xiphophorus_maculatus