EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSTRUG00000004229 (Gene tree)
Gene ID: 101076442
Gene Symbol: mrpl1
Alias: si:dkey-58f10.1
Full Name: mitochondrial ribosomal protein L1
Gene Type: protein_coding
Species: Takifugu_rubripes
Status: putative
Strand: Minus strand
Length: 4720 bases
Position: chr21:3496261-3500980
Accession: 101076442
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTRUP00000010018	Ribosomal_L1	PF00687.21	2.8e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTRUT00000010074	-	1363	XM_003974664	ENSTRUP00000010018	315 (aa)	XP_003974713	H2SC89

Gene Model

Click here to download ENSTRUG00000004229's gene model file

Pathways

Pathway ID	Pathway Name	Source
tru03010	Ribosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSTRUG00000004229's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTRUG00000004229	mrpl1	98	46.835	ENSG00000169288	MRPL1	93	51.152	Homo_sapiens
ENSTRUG00000004229	mrpl1	100	67.937	ENSAPOG00000005831	mrpl1	99	68.254	Acanthochromis_polyacanthus
ENSTRUG00000004229	mrpl1	90	77.895	ENSACIG00000002298	mrpl1	95	77.895	Amphilophus_citrinellus
ENSTRUG00000004229	mrpl1	99	69.872	ENSAOCG00000006715	mrpl1	99	69.872	Amphiprion_ocellaris
ENSTRUG00000004229	mrpl1	99	67.949	ENSAPEG00000020020	mrpl1	99	68.269	Amphiprion_percula
ENSTRUG00000004229	mrpl1	99	76.101	ENSATEG00000008760	mrpl1	99	76.415	Anabas_testudineus
ENSTRUG00000004229	mrpl1	69	57.339	ENSAPLG00000003428	MRPL1	93	51.711	Anas_platyrhynchos
ENSTRUG00000004229	mrpl1	87	45.878	ENSACAG00000012069	MRPL1	70	45.878	Anolis_carolinensis
ENSTRUG00000004229	mrpl1	98	43.492	ENSANAG00000035463	-	96	43.492	Aotus_nancymaae
ENSTRUG00000004229	mrpl1	72	46.053	ENSANAG00000020317	-	84	42.238	Aotus_nancymaae
ENSTRUG00000004229	mrpl1	98	76.038	ENSACLG00000001464	mrpl1	86	76.038	Astatotilapia_calliptera
ENSTRUG00000004229	mrpl1	99	53.687	ENSAMXG00000033077	mrpl1	98	53.916	Astyanax_mexicanus
ENSTRUG00000004229	mrpl1	99	44.548	ENSCPOG00000031686	MRPL1	98	44.548	Cavia_porcellus
ENSTRUG00000004229	mrpl1	99	43.574	ENSCLAG00000005041	MRPL1	98	44.308	Chinchilla_lanigera
ENSTRUG00000004229	mrpl1	98	41.587	ENSCANG00000033966	MRPL1	96	41.587	Colobus_angolensis_palliatus
ENSTRUG00000004229	mrpl1	98	47.170	ENSCGRG00001005376	-	98	47.170	Cricetulus_griseus_chok1gshd
ENSTRUG00000004229	mrpl1	98	46.855	ENSCGRG00000003658	-	98	46.855	Cricetulus_griseus_crigri
ENSTRUG00000004229	mrpl1	98	60.703	ENSCSEG00000014014	mrpl1	99	60.748	Cynoglossus_semilaevis
ENSTRUG00000004229	mrpl1	100	67.188	ENSCVAG00000021636	mrpl1	100	67.188	Cyprinodon_variegatus
ENSTRUG00000004229	mrpl1	99	55.975	ENSDARG00000054606	mrpl1	97	55.975	Danio_rerio
ENSTRUG00000004229	mrpl1	99	46.708	ENSDNOG00000001665	MRPL1	95	47.134	Dasypus_novemcinctus
ENSTRUG00000004229	mrpl1	98	44.688	ENSDORG00000015752	Mrpl1	94	44.688	Dipodomys_ordii
ENSTRUG00000004229	mrpl1	95	40.604	ENSEBUG00000004815	mrpl1	88	40.604	Eptatretus_burgeri
ENSTRUG00000004229	mrpl1	99	60.625	ENSELUG00000013391	mrpl1	99	61.875	Esox_lucius
ENSTRUG00000004229	mrpl1	98	46.984	ENSFCAG00000013776	MRPL1	96	46.984	Felis_catus
ENSTRUG00000004229	mrpl1	89	47.500	ENSFALG00000008527	MRPL1	96	47.500	Ficedula_albicollis
ENSTRUG00000004229	mrpl1	98	44.268	ENSFDAG00000011113	MRPL1	96	45.570	Fukomys_damarensis
ENSTRUG00000004229	mrpl1	99	66.458	ENSFHEG00000012375	mrpl1	97	67.846	Fundulus_heteroclitus
ENSTRUG00000004229	mrpl1	89	48.754	ENSGALG00000010324	MRPL1	91	46.815	Gallus_gallus
ENSTRUG00000004229	mrpl1	98	64.444	ENSGAFG00000006089	mrpl1	85	65.506	Gambusia_affinis
ENSTRUG00000004229	mrpl1	87	54.874	ENSGAGG00000015092	MRPL1	83	54.874	Gopherus_agassizii
ENSTRUG00000004229	mrpl1	80	52.157	ENSGGOG00000001304	MRPL1	96	46.984	Gorilla_gorilla
ENSTRUG00000004229	mrpl1	98	76.038	ENSHBUG00000004985	mrpl1	98	76.358	Haplochromis_burtoni
ENSTRUG00000004229	mrpl1	99	44.201	ENSHGLG00000006127	MRPL1	98	44.201	Heterocephalus_glaber_female
ENSTRUG00000004229	mrpl1	99	44.201	ENSHGLG00100004303	MRPL1	98	44.201	Heterocephalus_glaber_male
ENSTRUG00000004229	mrpl1	79	62.000	ENSIPUG00000009866	mrpl1	89	61.776	Ictalurus_punctatus
ENSTRUG00000004229	mrpl1	78	51.822	ENSSTOG00000001415	MRPL1	86	50.000	Ictidomys_tridecemlineatus
ENSTRUG00000004229	mrpl1	86	48.718	ENSJJAG00000012571	Mrpl1	84	48.718	Jaculus_jaculus
ENSTRUG00000004229	mrpl1	97	60.450	ENSKMAG00000004236	mrpl1	98	60.450	Kryptolebias_marmoratus
ENSTRUG00000004229	mrpl1	88	65.108	ENSLBEG00000017454	-	90	65.468	Labrus_bergylta
ENSTRUG00000004229	mrpl1	88	62.455	ENSLBEG00000013686	-	93	62.500	Labrus_bergylta
ENSTRUG00000004229	mrpl1	93	55.705	ENSLACG00000008208	MRPL1	91	56.040	Latimeria_chalumnae
ENSTRUG00000004229	mrpl1	99	58.385	ENSLOCG00000007408	mrpl1	99	58.385	Lepisosteus_oculatus
ENSTRUG00000004229	mrpl1	50	50.314	ENSMFAG00000030593	MRPL1	76	50.314	Macaca_fascicularis
ENSTRUG00000004229	mrpl1	84	48.507	ENSMLEG00000030203	MRPL1	93	48.507	Mandrillus_leucophaeus
ENSTRUG00000004229	mrpl1	100	73.750	ENSMAMG00000016943	mrpl1	100	73.750	Mastacembelus_armatus
ENSTRUG00000004229	mrpl1	98	75.719	ENSMZEG00005020288	mrpl1	98	75.719	Maylandia_zebra
ENSTRUG00000004229	mrpl1	69	55.963	ENSMGAG00000005136	MRPL1	85	54.852	Meleagris_gallopavo
ENSTRUG00000004229	mrpl1	87	40.000	ENSMAUG00000019228	Mrpl1	98	40.000	Mesocricetus_auratus
ENSTRUG00000004229	mrpl1	75	52.301	ENSMICG00000032729	-	92	52.301	Microcebus_murinus
ENSTRUG00000004229	mrpl1	86	50.360	ENSMOCG00000017395	Mrpl1	85	50.360	Microtus_ochrogaster
ENSTRUG00000004229	mrpl1	77	48.374	ENSMODG00000011704	MRPL1	86	48.374	Monodelphis_domestica
ENSTRUG00000004229	mrpl1	98	70.476	ENSMALG00000006393	mrpl1	98	70.476	Monopterus_albus
ENSTRUG00000004229	mrpl1	84	50.373	ENSMUSG00000029486	Mrpl1	95	46.106	Mus_musculus
ENSTRUG00000004229	mrpl1	97	46.417	MGP_PahariEiJ_G0017208	Mrpl1	95	47.040	Mus_pahari
ENSTRUG00000004229	mrpl1	97	46.349	MGP_SPRETEiJ_G0028427	Mrpl1	95	46.395	Mus_spretus
ENSTRUG00000004229	mrpl1	94	47.020	ENSMPUG00000006794	MRPL1	93	48.185	Mustela_putorius_furo
ENSTRUG00000004229	mrpl1	78	52.227	ENSNGAG00000015669	Mrpl1	95	47.682	Nannospalax_galili
ENSTRUG00000004229	mrpl1	98	75.399	ENSNBRG00000016660	mrpl1	98	75.399	Neolamprologus_brichardi
ENSTRUG00000004229	mrpl1	99	43.038	ENSODEG00000004206	MRPL1	98	43.574	Octodon_degus
ENSTRUG00000004229	mrpl1	98	77.143	ENSONIG00000014024	mrpl1	97	77.143	Oreochromis_niloticus
ENSTRUG00000004229	mrpl1	81	51.550	ENSOANG00000003564	MRPL1	91	51.550	Ornithorhynchus_anatinus
ENSTRUG00000004229	mrpl1	99	45.426	ENSOCUG00000003852	MRPL1	97	46.082	Oryctolagus_cuniculus
ENSTRUG00000004229	mrpl1	97	67.857	ENSORLG00000018859	mrpl1	93	67.857	Oryzias_latipes
ENSTRUG00000004229	mrpl1	99	66.456	ENSOMEG00000010049	mrpl1	99	66.456	Oryzias_melastigma
ENSTRUG00000004229	mrpl1	77	52.653	ENSOGAG00000012126	MRPL1	91	50.903	Otolemur_garnettii
ENSTRUG00000004229	mrpl1	98	46.835	ENSPPAG00000041378	MRPL1	96	47.302	Pan_paniscus
ENSTRUG00000004229	mrpl1	98	46.984	ENSPPRG00000009221	MRPL1	96	46.984	Panthera_pardus
ENSTRUG00000004229	mrpl1	98	46.984	ENSPTIG00000015465	MRPL1	96	46.984	Panthera_tigris_altaica
ENSTRUG00000004229	mrpl1	98	46.835	ENSPTRG00000016199	MRPL1	96	47.302	Pan_troglodytes
ENSTRUG00000004229	mrpl1	98	44.937	ENSPANG00000007832	MRPL1	97	45.397	Papio_anubis
ENSTRUG00000004229	mrpl1	99	56.000	ENSPKIG00000019299	mrpl1	98	56.000	Paramormyrops_kingsleyae
ENSTRUG00000004229	mrpl1	68	60.280	ENSPSIG00000015906	MRPL1	95	60.280	Pelodiscus_sinensis
ENSTRUG00000004229	mrpl1	95	63.844	ENSPMGG00000004020	mrpl1	94	63.694	Periophthalmus_magnuspinnatus
ENSTRUG00000004229	mrpl1	98	47.500	ENSPEMG00000018072	-	98	47.500	Peromyscus_maniculatus_bairdii
ENSTRUG00000004229	mrpl1	77	48.374	ENSPCIG00000029496	-	92	42.718	Phascolarctos_cinereus
ENSTRUG00000004229	mrpl1	98	65.079	ENSPFOG00000013095	mrpl1	97	65.397	Poecilia_formosa
ENSTRUG00000004229	mrpl1	98	65.079	ENSPLAG00000019871	mrpl1	98	65.397	Poecilia_latipinna
ENSTRUG00000004229	mrpl1	98	64.762	ENSPMEG00000015846	mrpl1	98	65.079	Poecilia_mexicana
ENSTRUG00000004229	mrpl1	97	63.666	ENSPREG00000003524	mrpl1	97	63.987	Poecilia_reticulata
ENSTRUG00000004229	mrpl1	74	53.390	ENSPPYG00000014870	MRPL1	96	47.302	Pongo_abelii
ENSTRUG00000004229	mrpl1	98	75.719	ENSPNYG00000006464	mrpl1	97	75.719	Pundamilia_nyererei
ENSTRUG00000004229	mrpl1	96	57.962	ENSPNAG00000018662	mrpl1	98	58.917	Pygocentrus_nattereri
ENSTRUG00000004229	mrpl1	98	46.984	ENSRNOG00000045785	LOC100359687	96	46.984	Rattus_norvegicus
ENSTRUG00000004229	mrpl1	97	46.965	ENSRNOG00000002070	Mrpl1	98	47.260	Rattus_norvegicus
ENSTRUG00000004229	mrpl1	98	45.397	ENSRBIG00000040801	MRPL1	97	45.397	Rhinopithecus_bieti
ENSTRUG00000004229	mrpl1	98	45.397	ENSRROG00000041586	MRPL1	97	45.397	Rhinopithecus_roxellana
ENSTRUG00000004229	mrpl1	97	43.711	ENSSHAG00000001696	MRPL1	95	44.409	Sarcophilus_harrisii
ENSTRUG00000004229	mrpl1	98	54.769	ENSSFOG00015014444	mrpl1	98	56.308	Scleropages_formosus
ENSTRUG00000004229	mrpl1	100	69.255	ENSSMAG00000015530	mrpl1	99	69.255	Scophthalmus_maximus
ENSTRUG00000004229	mrpl1	100	73.750	ENSSDUG00000018458	mrpl1	99	74.375	Seriola_dumerili
ENSTRUG00000004229	mrpl1	100	73.438	ENSSLDG00000000399	mrpl1	92	74.062	Seriola_lalandi_dorsalis
ENSTRUG00000004229	mrpl1	81	49.027	ENSSPUG00000002005	MRPL1	87	48.188	Sphenodon_punctatus
ENSTRUG00000004229	mrpl1	90	62.587	ENSSPAG00000022922	mrpl1	87	63.287	Stegastes_partitus
ENSTRUG00000004229	mrpl1	72	52.632	ENSTGUG00000001739	MRPL1	93	46.178	Taeniopygia_guttata
ENSTRUG00000004229	mrpl1	100	82.540	ENSTNIG00000016716	mrpl1	99	82.540	Tetraodon_nigroviridis
ENSTRUG00000004229	mrpl1	87	49.458	ENSUMAG00000007973	MRPL1	95	50.965	Ursus_maritimus
ENSTRUG00000004229	mrpl1	80	59.289	ENSXETG00000000373	mrpl1	76	58.712	Xenopus_tropicalis
ENSTRUG00000004229	mrpl1	98	63.208	ENSXMAG00000002920	mrpl1	97	64.968	Xiphophorus_maculatus