EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSTRUG00000004230 (Gene tree)
Gene ID: 101077928
Gene Symbol: tsen54
Alias: zgc:109927
Full Name: tRNA splicing endonuclease subunit 54
Gene Type: protein_coding
Species: Takifugu_rubripes
Status: putative
Strand: Plus strand
Length: 3672 bases
Position: chr5:11501240-11504911
Accession: 101077928
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTRUP00000010020	tRNA_int_end_N2	PF12928.7	4.6e-19	1	1
ENSTRUP00000010019	tRNA_int_end_N2	PF12928.7	6.1e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTRUT00000010075	-	1842	XM_011604314	ENSTRUP00000010019	466 (aa)	XP_011602616	H2SC90
ENSTRUT00000010076	-	1923	XM_011604313	ENSTRUP00000010020	490 (aa)	XP_011602615	H2SC91

Gene Model

Click here to download ENSTRUG00000004230's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTRUG00000004230's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTRUG00000004230	tsen54	87	61.850	ENSG00000182173	TSEN54	100	65.278	Homo_sapiens
ENSTRUG00000004230	tsen54	100	71.513	ENSAPOG00000009659	tsen54	98	71.513	Acanthochromis_polyacanthus
ENSTRUG00000004230	tsen54	95	42.998	ENSAMEG00000009414	TSEN54	96	43.615	Ailuropoda_melanoleuca
ENSTRUG00000004230	tsen54	100	70.727	ENSAOCG00000000152	tsen54	98	70.727	Amphiprion_ocellaris
ENSTRUG00000004230	tsen54	100	70.727	ENSAPEG00000018931	tsen54	98	70.727	Amphiprion_percula
ENSTRUG00000004230	tsen54	100	66.604	ENSATEG00000019860	tsen54	100	66.792	Anabas_testudineus
ENSTRUG00000004230	tsen54	85	45.778	ENSAPLG00000009419	TSEN54	99	45.333	Anas_platyrhynchos
ENSTRUG00000004230	tsen54	97	45.809	ENSACAG00000006714	TSEN54	98	45.614	Anolis_carolinensis
ENSTRUG00000004230	tsen54	83	61.765	ENSANAG00000024061	TSEN54	96	45.401	Aotus_nancymaae
ENSTRUG00000004230	tsen54	100	68.093	ENSACLG00000019800	tsen54	100	68.093	Astatotilapia_calliptera
ENSTRUG00000004230	tsen54	97	57.778	ENSAMXG00000006546	tsen54	97	57.374	Astyanax_mexicanus
ENSTRUG00000004230	tsen54	77	64.118	ENSBTAG00000000824	TSEN54	97	43.137	Bos_taurus
ENSTRUG00000004230	tsen54	83	61.765	ENSCJAG00000014278	TSEN54	96	45.205	Callithrix_jacchus
ENSTRUG00000004230	tsen54	96	43.080	ENSCAFG00000004798	TSEN54	97	43.301	Canis_familiaris
ENSTRUG00000004230	tsen54	96	43.080	ENSCAFG00020000312	TSEN54	97	43.301	Canis_lupus_dingo
ENSTRUG00000004230	tsen54	96	43.849	ENSCHIG00000019908	TSEN54	97	44.444	Capra_hircus
ENSTRUG00000004230	tsen54	65	66.667	ENSTSYG00000037439	TSEN54	99	43.640	Carlito_syrichta
ENSTRUG00000004230	tsen54	96	45.401	ENSCCAG00000036624	TSEN54	96	45.205	Cebus_capucinus
ENSTRUG00000004230	tsen54	91	59.794	ENSCATG00000042877	TSEN54	96	45.205	Cercocebus_atys
ENSTRUG00000004230	tsen54	96	45.809	ENSCLAG00000002924	TSEN54	96	45.614	Chinchilla_lanigera
ENSTRUG00000004230	tsen54	87	62.428	ENSCSAG00000004809	TSEN54	97	45.508	Chlorocebus_sabaeus
ENSTRUG00000004230	tsen54	97	46.214	ENSCPBG00000028071	TSEN54	98	46.214	Chrysemys_picta_bellii
ENSTRUG00000004230	tsen54	96	45.525	ENSCANG00000028053	TSEN54	97	45.331	Colobus_angolensis_palliatus
ENSTRUG00000004230	tsen54	96	45.331	ENSCGRG00001020029	Tsen54	97	45.136	Cricetulus_griseus_chok1gshd
ENSTRUG00000004230	tsen54	83	43.624	ENSCGRG00000016289	Tsen54	99	43.400	Cricetulus_griseus_crigri
ENSTRUG00000004230	tsen54	80	55.663	ENSCSEG00000020586	tsen54	99	55.422	Cynoglossus_semilaevis
ENSTRUG00000004230	tsen54	80	55.639	ENSDARG00000036844	tsen54	100	55.388	Danio_rerio
ENSTRUG00000004230	tsen54	81	62.353	ENSDNOG00000018452	TSEN54	97	43.411	Dasypus_novemcinctus
ENSTRUG00000004230	tsen54	96	45.580	ENSDORG00000004073	Tsen54	97	45.776	Dipodomys_ordii
ENSTRUG00000004230	tsen54	95	31.898	ENSEBUG00000005203	TSEN54	94	31.898	Eptatretus_burgeri
ENSTRUG00000004230	tsen54	87	60.847	ENSEASG00005000579	TSEN54	97	43.945	Equus_asinus_asinus
ENSTRUG00000004230	tsen54	87	60.847	ENSECAG00000004924	TSEN54	97	43.945	Equus_caballus
ENSTRUG00000004230	tsen54	65	63.964	ENSEEUG00000008467	TSEN54	99	41.794	Erinaceus_europaeus
ENSTRUG00000004230	tsen54	95	66.071	ENSELUG00000017703	tsen54	92	56.929	Esox_lucius
ENSTRUG00000004230	tsen54	96	43.470	ENSFCAG00000023712	TSEN54	97	44.444	Felis_catus
ENSTRUG00000004230	tsen54	92	45.885	ENSFALG00000001119	TSEN54	92	46.091	Ficedula_albicollis
ENSTRUG00000004230	tsen54	85	44.273	ENSFDAG00000019090	TSEN54	99	44.053	Fukomys_damarensis
ENSTRUG00000004230	tsen54	100	67.451	ENSFHEG00000005470	tsen54	100	67.843	Fundulus_heteroclitus
ENSTRUG00000004230	tsen54	96	48.330	ENSGMOG00000013146	tsen54	99	48.330	Gadus_morhua
ENSTRUG00000004230	tsen54	96	41.961	ENSGALG00000047163	TSEN54	99	41.961	Gallus_gallus
ENSTRUG00000004230	tsen54	100	66.932	ENSGAFG00000005111	tsen54	100	67.131	Gambusia_affinis
ENSTRUG00000004230	tsen54	96	64.033	ENSGACG00000014987	tsen54	100	64.033	Gasterosteus_aculeatus
ENSTRUG00000004230	tsen54	98	46.565	ENSGAGG00000006825	TSEN54	98	46.183	Gopherus_agassizii
ENSTRUG00000004230	tsen54	86	62.500	ENSGGOG00000009417	TSEN54	99	45.759	Gorilla_gorilla
ENSTRUG00000004230	tsen54	90	65.733	ENSHBUG00000018296	tsen54	92	65.733	Haplochromis_burtoni
ENSTRUG00000004230	tsen54	96	46.035	ENSHGLG00000007979	TSEN54	97	45.841	Heterocephalus_glaber_female
ENSTRUG00000004230	tsen54	96	44.942	ENSHGLG00100005497	TSEN54	97	44.747	Heterocephalus_glaber_male
ENSTRUG00000004230	tsen54	80	60.197	ENSHCOG00000007481	tsen54	100	59.559	Hippocampus_comes
ENSTRUG00000004230	tsen54	99	51.383	ENSIPUG00000000590	tsen54	99	50.593	Ictalurus_punctatus
ENSTRUG00000004230	tsen54	96	45.946	ENSSTOG00000012883	TSEN54	97	45.736	Ictidomys_tridecemlineatus
ENSTRUG00000004230	tsen54	96	45.988	ENSJJAG00000007365	Tsen54	97	45.793	Jaculus_jaculus
ENSTRUG00000004230	tsen54	100	63.774	ENSKMAG00000006944	tsen54	100	63.774	Kryptolebias_marmoratus
ENSTRUG00000004230	tsen54	100	64.943	ENSLBEG00000004199	tsen54	100	65.517	Labrus_bergylta
ENSTRUG00000004230	tsen54	96	40.426	ENSLACG00000009497	TSEN54	99	40.426	Latimeria_chalumnae
ENSTRUG00000004230	tsen54	99	52.060	ENSLOCG00000011191	tsen54	99	51.873	Lepisosteus_oculatus
ENSTRUG00000004230	tsen54	72	65.068	ENSLAFG00000011655	TSEN54	92	44.353	Loxodonta_africana
ENSTRUG00000004230	tsen54	87	61.850	ENSMFAG00000000712	TSEN54	88	56.875	Macaca_fascicularis
ENSTRUG00000004230	tsen54	87	61.850	ENSMNEG00000029199	TSEN54	88	56.875	Macaca_nemestrina
ENSTRUG00000004230	tsen54	74	64.865	ENSMLEG00000044168	TSEN54	87	43.584	Mandrillus_leucophaeus
ENSTRUG00000004230	tsen54	100	66.797	ENSMAMG00000019773	tsen54	100	67.446	Mastacembelus_armatus
ENSTRUG00000004230	tsen54	100	67.704	ENSMZEG00005000884	tsen54	100	67.704	Maylandia_zebra
ENSTRUG00000004230	tsen54	92	42.363	ENSMGAG00000009556	TSEN54	92	42.363	Meleagris_gallopavo
ENSTRUG00000004230	tsen54	96	45.597	ENSMAUG00000016838	Tsen54	97	45.401	Mesocricetus_auratus
ENSTRUG00000004230	tsen54	96	45.825	ENSMICG00000044012	TSEN54	96	47.047	Microcebus_murinus
ENSTRUG00000004230	tsen54	96	46.304	ENSMOCG00000021585	Tsen54	97	46.109	Microtus_ochrogaster
ENSTRUG00000004230	tsen54	96	67.841	ENSMMOG00000020189	tsen54	99	68.722	Mola_mola
ENSTRUG00000004230	tsen54	96	44.530	ENSMODG00000007438	TSEN54	95	44.338	Monodelphis_domestica
ENSTRUG00000004230	tsen54	99	67.308	ENSMALG00000020573	tsen54	99	67.308	Monopterus_albus
ENSTRUG00000004230	tsen54	96	46.094	MGP_CAROLIEiJ_G0017417	Tsen54	97	45.898	Mus_caroli
ENSTRUG00000004230	tsen54	96	46.680	ENSMUSG00000020781	Tsen54	97	46.484	Mus_musculus
ENSTRUG00000004230	tsen54	96	46.078	MGP_PahariEiJ_G0018547	Tsen54	97	45.882	Mus_pahari
ENSTRUG00000004230	tsen54	96	45.988	MGP_SPRETEiJ_G0018262	Tsen54	97	45.793	Mus_spretus
ENSTRUG00000004230	tsen54	77	60.588	ENSMPUG00000013870	TSEN54	97	42.105	Mustela_putorius_furo
ENSTRUG00000004230	tsen54	96	42.656	ENSMLUG00000015298	TSEN54	96	43.662	Myotis_lucifugus
ENSTRUG00000004230	tsen54	96	45.652	ENSNGAG00000015673	Tsen54	97	45.257	Nannospalax_galili
ENSTRUG00000004230	tsen54	88	42.184	ENSMEUG00000011908	TSEN54	99	41.970	Notamacropus_eugenii
ENSTRUG00000004230	tsen54	96	41.750	ENSOPRG00000012513	TSEN54	96	41.750	Ochotona_princeps
ENSTRUG00000004230	tsen54	100	67.379	ENSONIG00000009543	tsen54	100	67.379	Oreochromis_niloticus
ENSTRUG00000004230	tsen54	96	41.473	ENSOCUG00000009875	TSEN54	97	42.085	Oryctolagus_cuniculus
ENSTRUG00000004230	tsen54	100	63.400	ENSORLG00000000852	tsen54	100	63.400	Oryzias_latipes
ENSTRUG00000004230	tsen54	100	62.851	ENSORLG00020018221	tsen54	100	62.851	Oryzias_latipes_hni
ENSTRUG00000004230	tsen54	98	63.730	ENSORLG00015009413	tsen54	99	63.730	Oryzias_latipes_hsok
ENSTRUG00000004230	tsen54	100	63.434	ENSOMEG00000014402	tsen54	97	63.434	Oryzias_melastigma
ENSTRUG00000004230	tsen54	96	44.094	ENSOGAG00000001442	TSEN54	97	43.701	Otolemur_garnettii
ENSTRUG00000004230	tsen54	63	65.714	ENSOARG00000010361	TSEN54	98	40.225	Ovis_aries
ENSTRUG00000004230	tsen54	84	61.250	ENSPPAG00000043519	TSEN54	99	45.382	Pan_paniscus
ENSTRUG00000004230	tsen54	77	62.941	ENSPPRG00000009162	TSEN54	97	44.639	Panthera_pardus
ENSTRUG00000004230	tsen54	67	61.290	ENSPTIG00000019312	TSEN54	96	43.080	Panthera_tigris_altaica
ENSTRUG00000004230	tsen54	87	61.850	ENSPTRG00000009646	TSEN54	97	45.597	Pan_troglodytes
ENSTRUG00000004230	tsen54	87	61.850	ENSPANG00000020133	TSEN54	96	45.344	Papio_anubis
ENSTRUG00000004230	tsen54	99	52.102	ENSPKIG00000023018	tsen54	99	53.477	Paramormyrops_kingsleyae
ENSTRUG00000004230	tsen54	80	42.890	ENSPSIG00000012807	TSEN54	100	42.424	Pelodiscus_sinensis
ENSTRUG00000004230	tsen54	93	48.246	ENSPMGG00000019578	tsen54	100	48.465	Periophthalmus_magnuspinnatus
ENSTRUG00000004230	tsen54	96	46.394	ENSPEMG00000014857	Tsen54	97	46.199	Peromyscus_maniculatus_bairdii
ENSTRUG00000004230	tsen54	100	67.391	ENSPFOG00000022740	tsen54	100	67.787	Poecilia_formosa
ENSTRUG00000004230	tsen54	100	67.729	ENSPLAG00000014847	tsen54	100	68.127	Poecilia_latipinna
ENSTRUG00000004230	tsen54	100	67.530	ENSPMEG00000022876	tsen54	100	67.928	Poecilia_mexicana
ENSTRUG00000004230	tsen54	100	67.131	ENSPREG00000013090	tsen54	100	67.530	Poecilia_reticulata
ENSTRUG00000004230	tsen54	90	47.178	ENSPPYG00000008629	TSEN54	99	46.727	Pongo_abelii
ENSTRUG00000004230	tsen54	92	41.633	ENSPCAG00000002093	TSEN54	96	42.127	Procavia_capensis
ENSTRUG00000004230	tsen54	96	44.379	ENSPCOG00000027880	TSEN54	97	45.562	Propithecus_coquereli
ENSTRUG00000004230	tsen54	96	46.199	ENSPVAG00000008446	TSEN54	97	46.004	Pteropus_vampyrus
ENSTRUG00000004230	tsen54	93	66.735	ENSPNYG00000010217	tsen54	100	66.735	Pundamilia_nyererei
ENSTRUG00000004230	tsen54	99	55.106	ENSPNAG00000003770	tsen54	99	54.721	Pygocentrus_nattereri
ENSTRUG00000004230	tsen54	96	45.882	ENSRNOG00000004598	Tsen54	97	45.490	Rattus_norvegicus
ENSTRUG00000004230	tsen54	96	45.401	ENSRBIG00000043040	TSEN54	97	45.205	Rhinopithecus_bieti
ENSTRUG00000004230	tsen54	96	45.401	ENSRROG00000030797	TSEN54	97	45.205	Rhinopithecus_roxellana
ENSTRUG00000004230	tsen54	96	42.073	ENSSBOG00000013543	TSEN54	96	43.469	Saimiri_boliviensis_boliviensis
ENSTRUG00000004230	tsen54	96	43.454	ENSSHAG00000018127	TSEN54	96	42.884	Sarcophilus_harrisii
ENSTRUG00000004230	tsen54	79	52.246	ENSSFOG00015004093	tsen54	99	52.246	Scleropages_formosus
ENSTRUG00000004230	tsen54	97	63.851	ENSSMAG00000012449	tsen54	98	64.637	Scophthalmus_maximus
ENSTRUG00000004230	tsen54	100	68.786	ENSSDUG00000021506	tsen54	100	68.786	Seriola_dumerili
ENSTRUG00000004230	tsen54	100	68.208	ENSSLDG00000016303	tsen54	100	68.208	Seriola_lalandi_dorsalis
ENSTRUG00000004230	tsen54	78	43.091	ENSSPUG00000008988	TSEN54	96	42.623	Sphenodon_punctatus
ENSTRUG00000004230	tsen54	93	69.492	ENSSPAG00000008098	-	100	69.492	Stegastes_partitus
ENSTRUG00000004230	tsen54	80	63.391	ENSSPAG00000008047	tsen54	100	63.391	Stegastes_partitus
ENSTRUG00000004230	tsen54	96	43.836	ENSSSCG00000036852	TSEN54	97	44.227	Sus_scrofa
ENSTRUG00000004230	tsen54	85	44.643	ENSTGUG00000008548	TSEN54	99	43.973	Taeniopygia_guttata
ENSTRUG00000004230	tsen54	96	74.848	ENSTNIG00000011281	tsen54	98	76.113	Tetraodon_nigroviridis
ENSTRUG00000004230	tsen54	64	62.385	ENSTTRG00000015828	TSEN54	98	42.058	Tursiops_truncatus
ENSTRUG00000004230	tsen54	79	38.642	ENSUAMG00000010045	TSEN54	88	54.305	Ursus_americanus
ENSTRUG00000004230	tsen54	62	65.657	ENSUMAG00000008979	TSEN54	99	41.950	Ursus_maritimus
ENSTRUG00000004230	tsen54	95	43.504	ENSVVUG00000011411	TSEN54	97	44.094	Vulpes_vulpes
ENSTRUG00000004230	tsen54	97	45.618	ENSXETG00000012532	tsen54	99	61.207	Xenopus_tropicalis
ENSTRUG00000004230	tsen54	97	63.100	ENSXCOG00000018245	tsen54	99	63.537	Xiphophorus_couchianus
ENSTRUG00000004230	tsen54	100	67.131	ENSXMAG00000018818	tsen54	100	67.530	Xiphophorus_maculatus