EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSTRUG00000004268 (Gene tree)
Gene ID: -
Gene Symbol: apex1
Alias: hm:zehn1532|wu:fc13d11|zap1|zgc:66204
Full Name: apurinic/apyrimidinic endodeoxyribonuclease 1
Gene Type: protein_coding
Species: Takifugu_rubripes
Status: putative
Strand: Plus strand
Length: 1300 bases
Position: chr18:1294230-1295529
Accession: 101069391
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTRUP00000010123	Exo_endo_phos	PF03372.23	6.8e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTRUT00000010179	-	990	XM_003972656	ENSTRUP00000010123	329 (aa)	XP_003972705	H2SCJ4

Gene Model

Click here to download ENSTRUG00000004268's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTRUG00000004268's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTRUG00000004268	apex1	84	68.100	ENSG00000100823	APEX1	99	56.471	Homo_sapiens
ENSTRUG00000004268	apex1	95	81.789	ENSAPOG00000017002	apex1	100	81.470	Acanthochromis_polyacanthus
ENSTRUG00000004268	apex1	95	62.658	ENSAMEG00000005418	APEX1	87	67.391	Ailuropoda_melanoleuca
ENSTRUG00000004268	apex1	84	89.531	ENSACIG00000010653	apex1	94	89.531	Amphilophus_citrinellus
ENSTRUG00000004268	apex1	95	82.428	ENSAOCG00000009649	apex1	90	85.921	Amphiprion_ocellaris
ENSTRUG00000004268	apex1	95	82.748	ENSAPEG00000021453	apex1	90	86.282	Amphiprion_percula
ENSTRUG00000004268	apex1	95	85.577	ENSATEG00000002883	apex1	97	83.974	Anabas_testudineus
ENSTRUG00000004268	apex1	95	67.937	ENSACAG00000008099	APEX1	87	73.285	Anolis_carolinensis
ENSTRUG00000004268	apex1	95	63.924	ENSANAG00000030117	APEX1	87	67.986	Aotus_nancymaae
ENSTRUG00000004268	apex1	83	89.091	ENSACLG00000018441	apex1	100	85.304	Astatotilapia_calliptera
ENSTRUG00000004268	apex1	94	83.871	ENSAMXG00000034699	apex1	89	88.087	Astyanax_mexicanus
ENSTRUG00000004268	apex1	84	66.308	ENSBTAG00000002745	APEX1	87	66.667	Bos_taurus
ENSTRUG00000004268	apex1	85	44.211	WBGene00001372	exo-3	92	45.489	Caenorhabditis_elegans
ENSTRUG00000004268	apex1	95	64.241	ENSCJAG00000009726	APEX1	87	68.345	Callithrix_jacchus
ENSTRUG00000004268	apex1	95	63.608	ENSCAFG00000032033	APEX1	87	67.626	Canis_familiaris
ENSTRUG00000004268	apex1	50	57.647	ENSCAFG00020023002	-	73	64.394	Canis_lupus_dingo
ENSTRUG00000004268	apex1	95	63.608	ENSCAFG00020014377	-	87	67.626	Canis_lupus_dingo
ENSTRUG00000004268	apex1	83	53.455	ENSCHIG00000014537	-	87	53.455	Capra_hircus
ENSTRUG00000004268	apex1	84	66.308	ENSCHIG00000007298	-	87	66.667	Capra_hircus
ENSTRUG00000004268	apex1	95	62.975	ENSTSYG00000034813	APEX1	87	67.266	Carlito_syrichta
ENSTRUG00000004268	apex1	87	60.345	ENSCAPG00000016235	APEX1	91	67.797	Cavia_aperea
ENSTRUG00000004268	apex1	95	64.557	ENSCPOG00000030909	APEX1	87	68.705	Cavia_porcellus
ENSTRUG00000004268	apex1	84	59.140	ENSCCAG00000031931	-	87	58.993	Cebus_capucinus
ENSTRUG00000004268	apex1	95	64.241	ENSCCAG00000033056	-	87	68.345	Cebus_capucinus
ENSTRUG00000004268	apex1	95	63.924	ENSCATG00000015580	APEX1	87	67.986	Cercocebus_atys
ENSTRUG00000004268	apex1	95	63.608	ENSCLAG00000001002	APEX1	87	67.986	Chinchilla_lanigera
ENSTRUG00000004268	apex1	95	64.241	ENSCSAG00000016685	-	87	68.345	Chlorocebus_sabaeus
ENSTRUG00000004268	apex1	95	64.241	ENSCSAG00000016670	-	87	68.345	Chlorocebus_sabaeus
ENSTRUG00000004268	apex1	95	68.038	ENSCPBG00000009567	APEX1	87	72.563	Chrysemys_picta_bellii
ENSTRUG00000004268	apex1	87	54.007	ENSCING00000008137	-	85	56.554	Ciona_intestinalis
ENSTRUG00000004268	apex1	93	45.079	ENSCSAVG00000007144	-	100	51.550	Ciona_savignyi
ENSTRUG00000004268	apex1	95	64.241	ENSCANG00000030726	APEX1	87	67.986	Colobus_angolensis_palliatus
ENSTRUG00000004268	apex1	95	62.222	ENSCGRG00001017046	Apex1	88	66.547	Cricetulus_griseus_chok1gshd
ENSTRUG00000004268	apex1	95	62.222	ENSCGRG00000008984	Apex1	88	66.547	Cricetulus_griseus_crigri
ENSTRUG00000004268	apex1	95	83.706	ENSCSEG00000017499	apex1	99	82.748	Cynoglossus_semilaevis
ENSTRUG00000004268	apex1	95	85.623	ENSCVAG00000022075	apex1	100	84.345	Cyprinodon_variegatus
ENSTRUG00000004268	apex1	99	76.261	ENSDARG00000045843	apex1	89	84.477	Danio_rerio
ENSTRUG00000004268	apex1	95	60.443	ENSDNOG00000042234	APEX1	82	64.493	Dasypus_novemcinctus
ENSTRUG00000004268	apex1	95	62.342	ENSDORG00000001616	Apex1	87	66.906	Dipodomys_ordii
ENSTRUG00000004268	apex1	95	62.975	ENSETEG00000004855	-	87	67.266	Echinops_telfairi
ENSTRUG00000004268	apex1	72	59.244	ENSEBUG00000000622	-	92	59.244	Eptatretus_burgeri
ENSTRUG00000004268	apex1	98	61.350	ENSEASG00005017489	APEX1	64	67.626	Equus_asinus_asinus
ENSTRUG00000004268	apex1	98	61.350	ENSECAG00000022325	APEX1	71	67.626	Equus_caballus
ENSTRUG00000004268	apex1	81	67.286	ENSEEUG00000012569	APEX1	93	67.164	Erinaceus_europaeus
ENSTRUG00000004268	apex1	95	81.270	ENSELUG00000021706	apex1	89	86.282	Esox_lucius
ENSTRUG00000004268	apex1	98	62.154	ENSFCAG00000030869	APEX1	87	68.345	Felis_catus
ENSTRUG00000004268	apex1	95	63.924	ENSFDAG00000006120	APEX1	87	68.345	Fukomys_damarensis
ENSTRUG00000004268	apex1	100	83.030	ENSFHEG00000009031	apex1	88	81.818	Fundulus_heteroclitus
ENSTRUG00000004268	apex1	95	76.997	ENSGMOG00000007943	apex1	89	79.348	Gadus_morhua
ENSTRUG00000004268	apex1	95	84.345	ENSGAFG00000005311	apex1	100	83.387	Gambusia_affinis
ENSTRUG00000004268	apex1	95	84.395	ENSGACG00000019497	apex1	99	87.594	Gasterosteus_aculeatus
ENSTRUG00000004268	apex1	95	68.354	ENSGAGG00000014999	APEX1	87	73.188	Gopherus_agassizii
ENSTRUG00000004268	apex1	84	68.100	ENSGGOG00000002128	APEX1	87	67.986	Gorilla_gorilla
ENSTRUG00000004268	apex1	95	86.581	ENSHBUG00000005894	apex1	100	85.304	Haplochromis_burtoni
ENSTRUG00000004268	apex1	95	63.608	ENSHGLG00000002848	APEX1	87	68.345	Heterocephalus_glaber_female
ENSTRUG00000004268	apex1	95	63.608	ENSHGLG00100017878	APEX1	87	68.345	Heterocephalus_glaber_male
ENSTRUG00000004268	apex1	95	84.665	ENSHCOG00000009961	apex1	100	80.511	Hippocampus_comes
ENSTRUG00000004268	apex1	94	80.906	ENSIPUG00000005799	apex1	89	85.560	Ictalurus_punctatus
ENSTRUG00000004268	apex1	95	63.578	ENSSTOG00000010096	APEX1	87	68.345	Ictidomys_tridecemlineatus
ENSTRUG00000004268	apex1	95	62.939	ENSJJAG00000012067	-	87	67.266	Jaculus_jaculus
ENSTRUG00000004268	apex1	84	59.498	ENSJJAG00000020465	-	89	59.353	Jaculus_jaculus
ENSTRUG00000004268	apex1	95	56.075	ENSJJAG00000003660	-	87	60.072	Jaculus_jaculus
ENSTRUG00000004268	apex1	95	83.067	ENSKMAG00000021171	apex1	100	82.109	Kryptolebias_marmoratus
ENSTRUG00000004268	apex1	95	86.262	ENSLBEG00000010248	apex1	100	84.984	Labrus_bergylta
ENSTRUG00000004268	apex1	95	70.347	ENSLACG00000008617	APEX1	87	76.277	Latimeria_chalumnae
ENSTRUG00000004268	apex1	94	75.719	ENSLOCG00000015516	apex1	87	80.505	Lepisosteus_oculatus
ENSTRUG00000004268	apex1	95	64.557	ENSLAFG00000021872	APEX1	87	68.705	Loxodonta_africana
ENSTRUG00000004268	apex1	95	64.241	ENSMFAG00000002565	APEX1	87	67.986	Macaca_fascicularis
ENSTRUG00000004268	apex1	95	64.241	ENSMMUG00000048039	APEX1	87	67.986	Macaca_mulatta
ENSTRUG00000004268	apex1	95	64.353	ENSMNEG00000036944	APEX1	87	67.986	Macaca_nemestrina
ENSTRUG00000004268	apex1	95	63.924	ENSMLEG00000042125	APEX1	87	67.986	Mandrillus_leucophaeus
ENSTRUG00000004268	apex1	100	84.242	ENSMAMG00000023526	apex1	100	84.026	Mastacembelus_armatus
ENSTRUG00000004268	apex1	83	89.091	ENSMZEG00005014187	apex1	100	85.304	Maylandia_zebra
ENSTRUG00000004268	apex1	95	62.500	ENSMAUG00000013994	Apex1	88	66.187	Mesocricetus_auratus
ENSTRUG00000004268	apex1	95	62.658	ENSMICG00000043554	APEX1	87	66.547	Microcebus_murinus
ENSTRUG00000004268	apex1	95	63.438	ENSMOCG00000013721	Apex1	88	67.986	Microtus_ochrogaster
ENSTRUG00000004268	apex1	98	87.888	ENSMMOG00000010031	apex1	100	84.783	Mola_mola
ENSTRUG00000004268	apex1	84	67.025	ENSMODG00000007125	APEX1	86	67.636	Monodelphis_domestica
ENSTRUG00000004268	apex1	85	82.143	ENSMALG00000011699	apex1	74	81.949	Monopterus_albus
ENSTRUG00000004268	apex1	94	64.013	MGP_CAROLIEiJ_G0019209	Apex1	87	68.231	Mus_caroli
ENSTRUG00000004268	apex1	95	64.062	ENSMUSG00000035960	Apex1	88	67.986	Mus_musculus
ENSTRUG00000004268	apex1	84	68.231	MGP_PahariEiJ_G0030232	Apex1	88	67.986	Mus_pahari
ENSTRUG00000004268	apex1	95	64.062	MGP_SPRETEiJ_G0020101	Apex1	88	67.986	Mus_spretus
ENSTRUG00000004268	apex1	87	65.625	ENSMLUG00000028957	APEX1	86	67.029	Myotis_lucifugus
ENSTRUG00000004268	apex1	83	51.087	ENSNGAG00000021748	-	71	55.085	Nannospalax_galili
ENSTRUG00000004268	apex1	95	62.975	ENSNGAG00000002725	-	87	68.116	Nannospalax_galili
ENSTRUG00000004268	apex1	100	84.848	ENSNBRG00000005334	apex1	96	85.152	Neolamprologus_brichardi
ENSTRUG00000004268	apex1	84	67.742	ENSNLEG00000010839	APEX1	89	67.626	Nomascus_leucogenys
ENSTRUG00000004268	apex1	95	62.579	ENSMEUG00000014519	APEX1	87	66.788	Notamacropus_eugenii
ENSTRUG00000004268	apex1	95	62.069	ENSOPRG00000014029	APEX1	88	66.187	Ochotona_princeps
ENSTRUG00000004268	apex1	95	63.608	ENSODEG00000001703	-	87	67.986	Octodon_degus
ENSTRUG00000004268	apex1	91	49.837	ENSODEG00000004777	-	83	55.159	Octodon_degus
ENSTRUG00000004268	apex1	95	50.784	ENSODEG00000006583	-	86	53.873	Octodon_degus
ENSTRUG00000004268	apex1	84	89.170	ENSONIG00000012089	apex1	100	85.304	Oreochromis_niloticus
ENSTRUG00000004268	apex1	83	68.000	ENSOANG00000008836	APEX1	68	68.000	Ornithorhynchus_anatinus
ENSTRUG00000004268	apex1	95	62.305	ENSOCUG00000005022	APEX1	87	67.626	Oryctolagus_cuniculus
ENSTRUG00000004268	apex1	95	84.984	ENSORLG00000012378	apex1	100	84.026	Oryzias_latipes
ENSTRUG00000004268	apex1	95	84.984	ENSORLG00020021371	apex1	100	84.026	Oryzias_latipes_hni
ENSTRUG00000004268	apex1	95	84.984	ENSORLG00015020089	apex1	100	84.026	Oryzias_latipes_hsok
ENSTRUG00000004268	apex1	95	85.942	ENSOMEG00000018876	apex1	100	84.984	Oryzias_melastigma
ENSTRUG00000004268	apex1	94	57.235	ENSOGAG00000029355	-	88	60.289	Otolemur_garnettii
ENSTRUG00000004268	apex1	95	63.924	ENSOGAG00000013335	-	87	67.986	Otolemur_garnettii
ENSTRUG00000004268	apex1	81	63.569	ENSOARG00000001876	-	86	63.910	Ovis_aries
ENSTRUG00000004268	apex1	89	53.401	ENSOARG00000014424	-	94	53.242	Ovis_aries
ENSTRUG00000004268	apex1	84	66.308	ENSOARG00000019740	-	87	66.667	Ovis_aries
ENSTRUG00000004268	apex1	84	68.100	ENSPPAG00000038760	APEX1	89	67.986	Pan_paniscus
ENSTRUG00000004268	apex1	95	63.924	ENSPPRG00000011794	APEX1	87	68.345	Panthera_pardus
ENSTRUG00000004268	apex1	95	63.924	ENSPTIG00000014829	APEX1	87	68.345	Panthera_tigris_altaica
ENSTRUG00000004268	apex1	84	68.100	ENSPTRG00000006093	APEX1	89	67.986	Pan_troglodytes
ENSTRUG00000004268	apex1	95	63.924	ENSPANG00000022757	APEX1	87	67.986	Papio_anubis
ENSTRUG00000004268	apex1	84	84.420	ENSPKIG00000003504	apex1	88	84.477	Paramormyrops_kingsleyae
ENSTRUG00000004268	apex1	81	73.978	ENSPMGG00000016596	apex1	79	73.978	Periophthalmus_magnuspinnatus
ENSTRUG00000004268	apex1	95	63.125	ENSPEMG00000019097	Apex1	88	67.266	Peromyscus_maniculatus_bairdii
ENSTRUG00000004268	apex1	87	72.069	ENSPMAG00000007275	-	94	73.646	Petromyzon_marinus
ENSTRUG00000004268	apex1	84	66.308	ENSPCIG00000023274	APEX1	86	67.153	Phascolarctos_cinereus
ENSTRUG00000004268	apex1	95	83.706	ENSPFOG00000004178	apex1	100	82.748	Poecilia_formosa
ENSTRUG00000004268	apex1	95	84.026	ENSPLAG00000012779	apex1	100	82.748	Poecilia_latipinna
ENSTRUG00000004268	apex1	95	83.706	ENSPMEG00000019623	apex1	100	82.748	Poecilia_mexicana
ENSTRUG00000004268	apex1	95	83.121	ENSPREG00000014298	apex1	100	82.166	Poecilia_reticulata
ENSTRUG00000004268	apex1	84	67.742	ENSPPYG00000005565	APEX1	87	67.626	Pongo_abelii
ENSTRUG00000004268	apex1	95	62.658	ENSPCAG00000010376	APEX1	87	66.906	Procavia_capensis
ENSTRUG00000004268	apex1	95	62.975	ENSPCOG00000021564	APEX1	87	66.906	Propithecus_coquereli
ENSTRUG00000004268	apex1	87	66.319	ENSPVAG00000010736	APEX1	87	67.266	Pteropus_vampyrus
ENSTRUG00000004268	apex1	83	89.455	ENSPNYG00000023940	apex1	100	85.623	Pundamilia_nyererei
ENSTRUG00000004268	apex1	87	82.517	ENSPNAG00000020897	apex1	85	87.352	Pygocentrus_nattereri
ENSTRUG00000004268	apex1	95	63.438	ENSRNOG00000009663	Apex1	88	67.626	Rattus_norvegicus
ENSTRUG00000004268	apex1	95	63.924	ENSRBIG00000038325	APEX1	86	67.986	Rhinopithecus_bieti
ENSTRUG00000004268	apex1	95	56.369	ENSSBOG00000031372	-	90	60.072	Saimiri_boliviensis_boliviensis
ENSTRUG00000004268	apex1	84	68.459	ENSSBOG00000018921	-	87	68.345	Saimiri_boliviensis_boliviensis
ENSTRUG00000004268	apex1	95	60.991	ENSSHAG00000013524	APEX1	85	66.426	Sarcophilus_harrisii
ENSTRUG00000004268	apex1	84	85.507	ENSSFOG00015001948	apex1	89	85.560	Scleropages_formosus
ENSTRUG00000004268	apex1	95	86.349	ENSSMAG00000013348	apex1	100	85.714	Scophthalmus_maximus
ENSTRUG00000004268	apex1	95	84.076	ENSSDUG00000016377	apex1	100	82.803	Seriola_dumerili
ENSTRUG00000004268	apex1	95	84.345	ENSSLDG00000023005	apex1	100	83.067	Seriola_lalandi_dorsalis
ENSTRUG00000004268	apex1	87	68.942	ENSSPUG00000000531	APEX1	93	71.014	Sphenodon_punctatus
ENSTRUG00000004268	apex1	95	84.665	ENSSPAG00000000458	apex1	100	84.345	Stegastes_partitus
ENSTRUG00000004268	apex1	95	62.305	ENSSSCG00000040060	-	87	67.754	Sus_scrofa
ENSTRUG00000004268	apex1	90	37.624	ENSSSCG00000039705	-	89	39.711	Sus_scrofa
ENSTRUG00000004268	apex1	71	56.838	ENSTGUG00000014378	APEX1	100	56.838	Taeniopygia_guttata
ENSTRUG00000004268	apex1	95	88.179	ENSTNIG00000005778	apex1	90	93.863	Tetraodon_nigroviridis
ENSTRUG00000004268	apex1	95	60.443	ENSTBEG00000006405	APEX1	87	64.621	Tupaia_belangeri
ENSTRUG00000004268	apex1	71	65.532	ENSTTRG00000007860	APEX1	100	65.532	Tursiops_truncatus
ENSTRUG00000004268	apex1	95	62.658	ENSUAMG00000010457	APEX1	87	66.906	Ursus_americanus
ENSTRUG00000004268	apex1	95	62.658	ENSUMAG00000009178	APEX1	87	66.906	Ursus_maritimus
ENSTRUG00000004268	apex1	71	62.979	ENSVPAG00000005083	APEX1	100	62.979	Vicugna_pacos
ENSTRUG00000004268	apex1	95	63.291	ENSVVUG00000009010	APEX1	87	67.266	Vulpes_vulpes
ENSTRUG00000004268	apex1	95	65.924	ENSXETG00000024773	apex1	87	70.909	Xenopus_tropicalis
ENSTRUG00000004268	apex1	95	84.395	ENSXCOG00000015233	apex1	100	83.439	Xiphophorus_couchianus
ENSTRUG00000004268	apex1	95	84.345	ENSXMAG00000006195	apex1	100	83.387	Xiphophorus_maculatus