EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTRUG00000004288 (Gene tree)
Gene ID: 101079882
Gene Symbol: ythdf1
Alias: fb49c02|wu:fb49c02|wu:fi19h06|wu:fj87f09|wu:fp06c11|zgc:55657
Full Name: YTH domain-containing family protein 1-like
Gene Type: protein_coding
Species: Takifugu_rubripes
Status: putative
Strand: Plus strand
Length: 5018 bases
Position: chr3:12322907-12327924
Accession: 101079882
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTRUP00000010165	YTH	PF04146.15	6.1e-41	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTRUT00000010221	-	3690	XM_011602750	ENSTRUP00000010165	593 (aa)	XP_011601052	H2SCN5

Gene Model

Click here to download ENSTRUG00000004288's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTRUG00000004288's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTRUG00000004288	ythdf1	99	58.360	ENSTRUG00000007870	ythdf3	97	57.749
ENSTRUG00000004288	ythdf1	98	57.073	ENSTRUG00000011923	ythdf2	94	57.774
ENSTRUG00000004288	ythdf1	97	76.119	ENSTRUG00000005049	YTHDF1	97	76.560

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTRUG00000004288	ythdf1	98	71.453	ENSG00000149658	YTHDF1	99	71.380	Homo_sapiens
ENSTRUG00000004288	ythdf1	97	89.983	ENSAPOG00000004358	ythdf1	94	91.353	Acanthochromis_polyacanthus
ENSTRUG00000004288	ythdf1	99	76.105	ENSAPOG00000010796	YTHDF1	99	77.349	Acanthochromis_polyacanthus
ENSTRUG00000004288	ythdf1	97	80.607	ENSACIG00000011264	ythdf1	96	80.944	Amphilophus_citrinellus
ENSTRUG00000004288	ythdf1	97	76.764	ENSACIG00000020083	YTHDF1	99	76.342	Amphilophus_citrinellus
ENSTRUG00000004288	ythdf1	99	76.596	ENSAOCG00000012567	YTHDF1	99	75.671	Amphiprion_ocellaris
ENSTRUG00000004288	ythdf1	100	91.722	ENSAOCG00000022251	ythdf1	100	89.735	Amphiprion_ocellaris
ENSTRUG00000004288	ythdf1	99	76.759	ENSAPEG00000008750	YTHDF1	99	75.839	Amphiprion_percula
ENSTRUG00000004288	ythdf1	97	91.667	ENSAPEG00000021878	ythdf1	95	89.626	Amphiprion_percula
ENSTRUG00000004288	ythdf1	99	78.477	ENSATEG00000005996	YTHDF1	99	76.510	Anabas_testudineus
ENSTRUG00000004288	ythdf1	97	89.761	ENSATEG00000023840	ythdf1	95	90.785	Anabas_testudineus
ENSTRUG00000004288	ythdf1	97	71.724	ENSAPLG00000005985	YTHDF1	99	72.542	Anas_platyrhynchos
ENSTRUG00000004288	ythdf1	98	71.647	ENSACAG00000005560	YTHDF1	99	72.773	Anolis_carolinensis
ENSTRUG00000004288	ythdf1	99	59.865	ENSANAG00000021022	-	96	60.103	Aotus_nancymaae
ENSTRUG00000004288	ythdf1	98	70.427	ENSANAG00000034786	-	99	71.614	Aotus_nancymaae
ENSTRUG00000004288	ythdf1	99	78.182	ENSACLG00000025518	YTHDF1	99	76.007	Astatotilapia_calliptera
ENSTRUG00000004288	ythdf1	97	70.172	ENSBTAG00000010383	YTHDF1	99	71.004	Bos_taurus
ENSTRUG00000004288	ythdf1	98	70.256	ENSCJAG00000010056	YTHDF1	99	71.261	Callithrix_jacchus
ENSTRUG00000004288	ythdf1	97	69.430	ENSCHIG00000026494	YTHDF1	99	70.202	Capra_hircus
ENSTRUG00000004288	ythdf1	94	72.114	ENSTSYG00000033436	YTHDF1	97	72.648	Carlito_syrichta
ENSTRUG00000004288	ythdf1	95	71.278	ENSCAPG00000002544	YTHDF1	90	71.147	Cavia_aperea
ENSTRUG00000004288	ythdf1	98	70.377	ENSCPOG00000010202	YTHDF1	99	70.875	Cavia_porcellus
ENSTRUG00000004288	ythdf1	98	70.940	ENSCATG00000033272	YTHDF1	99	71.717	Cercocebus_atys
ENSTRUG00000004288	ythdf1	98	70.890	ENSCLAG00000005989	YTHDF1	99	71.549	Chinchilla_lanigera
ENSTRUG00000004288	ythdf1	98	70.940	ENSCSAG00000016266	YTHDF1	99	71.717	Chlorocebus_sabaeus
ENSTRUG00000004288	ythdf1	98	71.769	ENSCPBG00000027183	YTHDF1	99	72.559	Chrysemys_picta_bellii
ENSTRUG00000004288	ythdf1	96	70.884	ENSCANG00000029082	YTHDF1	97	71.672	Colobus_angolensis_palliatus
ENSTRUG00000004288	ythdf1	99	71.092	ENSCGRG00001016568	Ythdf1	99	72.054	Cricetulus_griseus_chok1gshd
ENSTRUG00000004288	ythdf1	96	71.379	ENSCGRG00000009207	Ythdf1	99	72.260	Cricetulus_griseus_crigri
ENSTRUG00000004288	ythdf1	97	83.821	ENSCSEG00000020623	YTHDF1	97	84.509	Cynoglossus_semilaevis
ENSTRUG00000004288	ythdf1	99	86.477	ENSCVAG00000017940	ythdf1	95	86.689	Cyprinodon_variegatus
ENSTRUG00000004288	ythdf1	99	77.076	ENSCVAG00000014378	YTHDF1	99	77.565	Cyprinodon_variegatus
ENSTRUG00000004288	ythdf1	99	81.229	ENSDARG00000016447	ythdf1	94	82.823	Danio_rerio
ENSTRUG00000004288	ythdf1	98	71.184	ENSDNOG00000043590	YTHDF1	99	72.222	Dasypus_novemcinctus
ENSTRUG00000004288	ythdf1	92	52.548	ENSETEG00000017860	-	95	51.592	Echinops_telfairi
ENSTRUG00000004288	ythdf1	99	70.489	ENSEASG00005023186	YTHDF1	99	71.044	Equus_asinus_asinus
ENSTRUG00000004288	ythdf1	99	70.608	ENSECAG00000019475	YTHDF1	99	71.933	Equus_caballus
ENSTRUG00000004288	ythdf1	89	70.467	ENSEEUG00000007461	YTHDF1	99	71.455	Erinaceus_europaeus
ENSTRUG00000004288	ythdf1	99	73.132	ENSELUG00000001906	YTHDF1	99	74.820	Esox_lucius
ENSTRUG00000004288	ythdf1	99	82.167	ENSELUG00000022768	ythdf1	99	81.788	Esox_lucius
ENSTRUG00000004288	ythdf1	98	72.061	ENSFALG00000010463	YTHDF1	99	72.727	Ficedula_albicollis
ENSTRUG00000004288	ythdf1	98	69.521	ENSFDAG00000019602	YTHDF1	99	70.539	Fukomys_damarensis
ENSTRUG00000004288	ythdf1	99	87.354	ENSFHEG00000023218	ythdf1	95	87.543	Fundulus_heteroclitus
ENSTRUG00000004288	ythdf1	99	78.053	ENSFHEG00000002540	YTHDF1	99	78.087	Fundulus_heteroclitus
ENSTRUG00000004288	ythdf1	89	97.354	ENSGMOG00000019610	ythdf1	94	79.898	Gadus_morhua
ENSTRUG00000004288	ythdf1	98	71.918	ENSGALG00000005745	YTHDF1	99	73.234	Gallus_gallus
ENSTRUG00000004288	ythdf1	99	76.432	ENSGAFG00000021100	YTHDF1	99	77.888	Gambusia_affinis
ENSTRUG00000004288	ythdf1	99	76.672	ENSGACG00000002613	YTHDF1	99	76.480	Gasterosteus_aculeatus
ENSTRUG00000004288	ythdf1	97	89.537	ENSGACG00000012014	ythdf1	94	88.851	Gasterosteus_aculeatus
ENSTRUG00000004288	ythdf1	98	71.939	ENSGAGG00000003007	YTHDF1	99	72.941	Gopherus_agassizii
ENSTRUG00000004288	ythdf1	98	71.891	ENSGGOG00000008340	YTHDF1	99	71.549	Gorilla_gorilla
ENSTRUG00000004288	ythdf1	97	90.051	ENSHBUG00000011284	ythdf1	93	91.938	Haplochromis_burtoni
ENSTRUG00000004288	ythdf1	99	78.017	ENSHBUG00000004875	YTHDF1	99	75.839	Haplochromis_burtoni
ENSTRUG00000004288	ythdf1	98	70.205	ENSHGLG00000006585	YTHDF1	99	71.212	Heterocephalus_glaber_female
ENSTRUG00000004288	ythdf1	98	70.205	ENSHGLG00100004683	YTHDF1	99	71.212	Heterocephalus_glaber_male
ENSTRUG00000004288	ythdf1	100	86.120	ENSHCOG00000008866	ythdf1	100	87.458	Hippocampus_comes
ENSTRUG00000004288	ythdf1	99	76.451	ENSHCOG00000011303	YTHDF1	99	75.856	Hippocampus_comes
ENSTRUG00000004288	ythdf1	99	79.768	ENSIPUG00000000425	Ythdf1	97	78.497	Ictalurus_punctatus
ENSTRUG00000004288	ythdf1	95	72.007	ENSJJAG00000013589	Ythdf1	99	71.918	Jaculus_jaculus
ENSTRUG00000004288	ythdf1	99	77.723	ENSKMAG00000017472	YTHDF1	99	77.739	Kryptolebias_marmoratus
ENSTRUG00000004288	ythdf1	97	87.543	ENSKMAG00000005595	ythdf1	95	86.519	Kryptolebias_marmoratus
ENSTRUG00000004288	ythdf1	97	89.384	ENSLBEG00000014105	ythdf1	95	91.468	Labrus_bergylta
ENSTRUG00000004288	ythdf1	99	77.333	ENSLBEG00000012068	YTHDF1	99	74.958	Labrus_bergylta
ENSTRUG00000004288	ythdf1	96	72.154	ENSLACG00000014195	YTHDF1	95	72.842	Latimeria_chalumnae
ENSTRUG00000004288	ythdf1	99	75.465	ENSLOCG00000005020	ythdf1	94	74.915	Lepisosteus_oculatus
ENSTRUG00000004288	ythdf1	98	71.331	ENSLAFG00000008884	YTHDF1	99	71.739	Loxodonta_africana
ENSTRUG00000004288	ythdf1	98	70.940	ENSMFAG00000042868	YTHDF1	99	71.717	Macaca_fascicularis
ENSTRUG00000004288	ythdf1	98	70.940	ENSMMUG00000009227	YTHDF1	99	71.717	Macaca_mulatta
ENSTRUG00000004288	ythdf1	98	70.940	ENSMNEG00000030851	YTHDF1	99	71.717	Macaca_nemestrina
ENSTRUG00000004288	ythdf1	98	71.160	ENSMLEG00000009252	YTHDF1	99	71.918	Mandrillus_leucophaeus
ENSTRUG00000004288	ythdf1	99	77.815	ENSMAMG00000011072	YTHDF1	99	76.174	Mastacembelus_armatus
ENSTRUG00000004288	ythdf1	97	90.614	ENSMAMG00000024255	ythdf1	95	88.737	Mastacembelus_armatus
ENSTRUG00000004288	ythdf1	99	78.017	ENSMZEG00005023596	YTHDF1	99	75.839	Maylandia_zebra
ENSTRUG00000004288	ythdf1	97	90.051	ENSMZEG00005026397	ythdf1	95	91.938	Maylandia_zebra
ENSTRUG00000004288	ythdf1	97	71.306	ENSMGAG00000006139	YTHDF1	99	72.128	Meleagris_gallopavo
ENSTRUG00000004288	ythdf1	98	71.012	ENSMAUG00000017660	Ythdf1	99	71.886	Mesocricetus_auratus
ENSTRUG00000004288	ythdf1	98	70.154	ENSMICG00000032266	YTHDF1	99	71.212	Microcebus_murinus
ENSTRUG00000004288	ythdf1	98	70.840	ENSMOCG00000013573	Ythdf1	99	71.886	Microtus_ochrogaster
ENSTRUG00000004288	ythdf1	97	88.265	ENSMMOG00000017500	ythdf1	95	88.095	Mola_mola
ENSTRUG00000004288	ythdf1	99	76.962	ENSMMOG00000020467	YTHDF1	94	77.002	Mola_mola
ENSTRUG00000004288	ythdf1	88	73.435	ENSMODG00000016842	YTHDF1	99	73.371	Monodelphis_domestica
ENSTRUG00000004288	ythdf1	99	77.612	ENSMALG00000022209	YTHDF1	99	75.793	Monopterus_albus
ENSTRUG00000004288	ythdf1	97	89.474	ENSMALG00000015672	ythdf1	95	89.474	Monopterus_albus
ENSTRUG00000004288	ythdf1	98	70.669	MGP_CAROLIEiJ_G0024790	Ythdf1	99	71.549	Mus_caroli
ENSTRUG00000004288	ythdf1	98	70.669	ENSMUSG00000038848	Ythdf1	99	71.549	Mus_musculus
ENSTRUG00000004288	ythdf1	98	70.669	MGP_PahariEiJ_G0026237	Ythdf1	99	71.549	Mus_pahari
ENSTRUG00000004288	ythdf1	98	70.669	MGP_SPRETEiJ_G0025715	Ythdf1	99	71.549	Mus_spretus
ENSTRUG00000004288	ythdf1	88	68.511	ENSMPUG00000008111	YTHDF1	99	70.130	Mustela_putorius_furo
ENSTRUG00000004288	ythdf1	94	72.242	ENSMLUG00000002241	YTHDF1	96	72.426	Myotis_lucifugus
ENSTRUG00000004288	ythdf1	98	71.355	ENSNGAG00000000334	Ythdf1	99	72.222	Nannospalax_galili
ENSTRUG00000004288	ythdf1	97	77.929	ENSNBRG00000015321	YTHDF1	99	75.839	Neolamprologus_brichardi
ENSTRUG00000004288	ythdf1	97	90.068	ENSNBRG00000008213	ythdf1	96	91.952	Neolamprologus_brichardi
ENSTRUG00000004288	ythdf1	94	64.643	ENSOPRG00000001758	-	98	64.982	Ochotona_princeps
ENSTRUG00000004288	ythdf1	98	66.951	ENSODEG00000004380	-	99	71.212	Octodon_degus
ENSTRUG00000004288	ythdf1	97	58.448	ENSODEG00000000074	-	95	59.067	Octodon_degus
ENSTRUG00000004288	ythdf1	97	90.753	ENSONIG00000016799	ythdf1	97	90.240	Oreochromis_niloticus
ENSTRUG00000004288	ythdf1	98	73.116	ENSOANG00000003723	YTHDF1	99	72.896	Ornithorhynchus_anatinus
ENSTRUG00000004288	ythdf1	97	86.348	ENSORLG00000014665	YTHDF1	95	87.372	Oryzias_latipes
ENSTRUG00000004288	ythdf1	99	75.205	ENSORLG00000009739	YTHDF1	99	76.950	Oryzias_latipes
ENSTRUG00000004288	ythdf1	99	77.258	ENSORLG00020001332	YTHDF1	99	78.772	Oryzias_latipes_hni
ENSTRUG00000004288	ythdf1	97	86.838	ENSORLG00020000307	ythdf1	95	87.863	Oryzias_latipes_hni
ENSTRUG00000004288	ythdf1	97	86.838	ENSORLG00015006302	ythdf1	95	87.863	Oryzias_latipes_hsok
ENSTRUG00000004288	ythdf1	99	74.877	ENSORLG00015018321	YTHDF1	99	76.603	Oryzias_latipes_hsok
ENSTRUG00000004288	ythdf1	97	89.365	ENSOMEG00000002941	YTHDF1	95	88.851	Oryzias_melastigma
ENSTRUG00000004288	ythdf1	99	77.000	ENSOMEG00000011843	YTHDF1	94	76.102	Oryzias_melastigma
ENSTRUG00000004288	ythdf1	98	69.692	ENSOGAG00000000480	YTHDF1	99	70.707	Otolemur_garnettii
ENSTRUG00000004288	ythdf1	98	71.891	ENSPPAG00000023277	YTHDF1	99	71.672	Pan_paniscus
ENSTRUG00000004288	ythdf1	79	80.995	ENSPTIG00000017355	YTHDF1	95	80.932	Panthera_tigris_altaica
ENSTRUG00000004288	ythdf1	98	71.891	ENSPTRG00000013730	YTHDF1	99	71.549	Pan_troglodytes
ENSTRUG00000004288	ythdf1	98	70.940	ENSPANG00000021472	YTHDF1	99	71.717	Papio_anubis
ENSTRUG00000004288	ythdf1	99	72.109	ENSPKIG00000005026	YTHDF1	96	71.848	Paramormyrops_kingsleyae
ENSTRUG00000004288	ythdf1	98	72.696	ENSPSIG00000005529	YTHDF1	95	72.504	Pelodiscus_sinensis
ENSTRUG00000004288	ythdf1	95	85.114	ENSPMGG00000015328	ythdf1	96	86.515	Periophthalmus_magnuspinnatus
ENSTRUG00000004288	ythdf1	94	79.929	ENSPMGG00000009101	YTHDF1	99	78.559	Periophthalmus_magnuspinnatus
ENSTRUG00000004288	ythdf1	96	72.281	ENSPEMG00000020199	Ythdf1	99	72.089	Peromyscus_maniculatus_bairdii
ENSTRUG00000004288	ythdf1	99	73.311	ENSPCIG00000017170	YTHDF1	99	73.557	Phascolarctos_cinereus
ENSTRUG00000004288	ythdf1	99	85.953	ENSPFOG00000005405	ythdf1	95	86.278	Poecilia_formosa
ENSTRUG00000004288	ythdf1	99	77.870	ENSPLAG00000006298	YTHDF1	94	76.988	Poecilia_latipinna
ENSTRUG00000004288	ythdf1	99	85.953	ENSPLAG00000006653	ythdf1	95	86.278	Poecilia_latipinna
ENSTRUG00000004288	ythdf1	100	85.500	ENSPMEG00000023753	ythdf1	100	86.379	Poecilia_mexicana
ENSTRUG00000004288	ythdf1	99	77.870	ENSPMEG00000020969	-	99	75.336	Poecilia_mexicana
ENSTRUG00000004288	ythdf1	95	78.374	ENSPREG00000017662	YTHDF1	93	78.345	Poecilia_reticulata
ENSTRUG00000004288	ythdf1	100	86.855	ENSPREG00000002173	ythdf1	100	86.855	Poecilia_reticulata
ENSTRUG00000004288	ythdf1	82	86.735	ENSPPYG00000011226	YTHDF1	99	91.282	Pongo_abelii
ENSTRUG00000004288	ythdf1	89	69.376	ENSPCAG00000002452	YTHDF1	98	69.376	Procavia_capensis
ENSTRUG00000004288	ythdf1	98	70.497	ENSPCOG00000025969	YTHDF1	99	71.549	Propithecus_coquereli
ENSTRUG00000004288	ythdf1	99	65.763	ENSPVAG00000017568	YTHDF1	97	66.551	Pteropus_vampyrus
ENSTRUG00000004288	ythdf1	99	78.017	ENSPNYG00000002266	YTHDF1	99	75.839	Pundamilia_nyererei
ENSTRUG00000004288	ythdf1	97	90.051	ENSPNYG00000014007	ythdf1	97	88.488	Pundamilia_nyererei
ENSTRUG00000004288	ythdf1	99	80.634	ENSPNAG00000012447	ythdf1	94	82.423	Pygocentrus_nattereri
ENSTRUG00000004288	ythdf1	98	70.205	ENSRNOG00000027015	Ythdf1	99	71.380	Rattus_norvegicus
ENSTRUG00000004288	ythdf1	98	70.085	ENSRBIG00000044959	YTHDF1	99	70.875	Rhinopithecus_bieti
ENSTRUG00000004288	ythdf1	98	70.085	ENSRROG00000033014	YTHDF1	99	70.875	Rhinopithecus_roxellana
ENSTRUG00000004288	ythdf1	94	70.390	ENSSBOG00000027278	YTHDF1	99	70.130	Saimiri_boliviensis_boliviensis
ENSTRUG00000004288	ythdf1	97	72.790	ENSSHAG00000010430	YTHDF1	88	72.789	Sarcophilus_harrisii
ENSTRUG00000004288	ythdf1	99	75.712	ENSSFOG00015000284	ythdf1	99	75.124	Scleropages_formosus
ENSTRUG00000004288	ythdf1	99	77.104	ENSSMAG00000007635	YTHDF1	93	76.460	Scophthalmus_maximus
ENSTRUG00000004288	ythdf1	71	96.795	ENSSMAG00000013715	ythdf1	93	92.179	Scophthalmus_maximus
ENSTRUG00000004288	ythdf1	97	91.156	ENSSDUG00000000435	ythdf1	95	91.156	Seriola_dumerili
ENSTRUG00000004288	ythdf1	99	76.290	ENSSDUG00000015823	YTHDF1	98	76.531	Seriola_dumerili
ENSTRUG00000004288	ythdf1	97	90.832	ENSSLDG00000024948	ythdf1	95	90.832	Seriola_lalandi_dorsalis
ENSTRUG00000004288	ythdf1	80	96.667	ENSSLDG00000001054	YTHDF1	93	95.385	Seriola_lalandi_dorsalis
ENSTRUG00000004288	ythdf1	97	88.384	ENSSPAG00000014989	ythdf1	95	89.731	Stegastes_partitus
ENSTRUG00000004288	ythdf1	99	75.941	ENSSPAG00000003666	YTHDF1	99	75.042	Stegastes_partitus
ENSTRUG00000004288	ythdf1	96	72.049	ENSTGUG00000007565	YTHDF1	99	72.867	Taeniopygia_guttata
ENSTRUG00000004288	ythdf1	97	75.172	ENSTNIG00000003975	YTHDF1	99	74.454	Tetraodon_nigroviridis
ENSTRUG00000004288	ythdf1	99	86.172	ENSTNIG00000012490	ythdf1	99	86.003	Tetraodon_nigroviridis
ENSTRUG00000004288	ythdf1	96	72.727	ENSXETG00000027086	ythdf1	94	72.408	Xenopus_tropicalis
ENSTRUG00000004288	ythdf1	97	83.966	ENSXCOG00000002490	ythdf1	93	83.803	Xiphophorus_couchianus
ENSTRUG00000004288	ythdf1	96	76.441	ENSXCOG00000008115	YTHDF1	94	77.018	Xiphophorus_couchianus
ENSTRUG00000004288	ythdf1	99	86.811	ENSXMAG00000008525	ythdf1	95	87.158	Xiphophorus_maculatus
ENSTRUG00000004288	ythdf1	99	76.268	ENSXMAG00000015644	YTHDF1	99	78.087	Xiphophorus_maculatus