EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSTRUG00000004323 (Gene tree)
Gene ID: 101078279
Gene Symbol: -
Alias: -
Full Name: cleavage stimulation factor subunit 2
Gene Type: protein_coding
Species: Takifugu_rubripes
Status: putative
Strand: Minus strand
Length: 5414 bases
Position: chrHE592355.1:12846-18259
Accession: 101078279
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTRUP00000010252	RRM_1	PF00076.22	1.1e-24	1	1
ENSTRUP00000010251	RRM_1	PF00076.22	1.1e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTRUT00000010309	-	1647	XM_011618330	ENSTRUP00000010251	508 (aa)	XP_011616632	H2SCX1
ENSTRUT00000010310	-	1614	XM_003977188	ENSTRUP00000010252	497 (aa)	XP_003977237	H2SCX2

Gene Model

Click here to download ENSTRUG00000004323's gene model file

Pathways

Pathway ID	Pathway Name	Source
tru03015	mRNA surveillance pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSTRUG00000004323's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTRUG00000004323	-	97	51.713	ENSG00000177613	CSTF2T	99	52.572	Homo_sapiens
ENSTRUG00000004323	-	97	88.889	ENSAMEG00000015766	CSTF2T	81	90.256	Ailuropoda_melanoleuca
ENSTRUG00000004323	-	57	54.985	ENSANAG00000027508	-	67	62.548	Aotus_nancymaae
ENSTRUG00000004323	-	57	54.037	ENSCJAG00000039083	-	71	60.156	Callithrix_jacchus
ENSTRUG00000004323	-	57	55.152	ENSCJAG00000011554	-	73	62.548	Callithrix_jacchus
ENSTRUG00000004323	-	97	66.292	ENSCHIG00000016590	CSTF2T	99	60.714	Capra_hircus
ENSTRUG00000004323	-	97	53.514	ENSTSYG00000007750	CSTF2T	51	73.846	Carlito_syrichta
ENSTRUG00000004323	-	57	54.518	ENSCCAG00000020816	-	66	62.069	Cebus_capucinus
ENSTRUG00000004323	-	97	52.373	ENSCSAG00000018437	CSTF2T	99	51.757	Chlorocebus_sabaeus
ENSTRUG00000004323	-	50	90.256	ENSCHOG00000011888	-	57	77.200	Choloepus_hoffmanni
ENSTRUG00000004323	-	97	65.934	ENSCGRG00001003222	Cstf2t	51	88.889	Cricetulus_griseus_chok1gshd
ENSTRUG00000004323	-	97	53.145	ENSCGRG00000008682	Cstf2t	89	72.761	Cricetulus_griseus_crigri
ENSTRUG00000004323	-	96	67.886	ENSCSEG00000002596	-	99	68.689	Cynoglossus_semilaevis
ENSTRUG00000004323	-	97	54.146	ENSDNOG00000003283	CSTF2T	88	76.892	Dasypus_novemcinctus
ENSTRUG00000004323	-	96	83.607	ENSDORG00000011245	Cstf2t	53	74.648	Dipodomys_ordii
ENSTRUG00000004323	-	97	50.928	ENSEBUG00000014295	CSTF2T	99	48.589	Eptatretus_burgeri
ENSTRUG00000004323	-	97	53.674	ENSEASG00005012929	CSTF2T	99	60.900	Equus_asinus_asinus
ENSTRUG00000004323	-	96	75.422	ENSELUG00000004079	-	97	77.822	Esox_lucius
ENSTRUG00000004323	-	97	51.956	ENSFCAG00000046300	CSTF2T	89	75.686	Felis_catus
ENSTRUG00000004323	-	97	52.690	ENSGGOG00000036416	-	99	52.855	Gorilla_gorilla
ENSTRUG00000004323	-	97	52.690	ENSGGOG00000042388	-	99	52.855	Gorilla_gorilla
ENSTRUG00000004323	-	86	88.500	ENSSTOG00000026303	CSTF2T	77	90.256	Ictidomys_tridecemlineatus
ENSTRUG00000004323	-	80	63.145	ENSJJAG00000019881	Cstf2t	99	57.982	Jaculus_jaculus
ENSTRUG00000004323	-	96	59.484	ENSLAFG00000002058	CSTF2T	99	58.545	Loxodonta_africana
ENSTRUG00000004323	-	56	54.354	ENSMMUG00000042906	-	74	62.069	Macaca_mulatta
ENSTRUG00000004323	-	97	54.560	ENSMAUG00000006359	Cstf2t	99	59.174	Mesocricetus_auratus
ENSTRUG00000004323	-	75	62.530	ENSMICG00000030551	-	97	64.824	Microcebus_murinus
ENSTRUG00000004323	-	97	51.618	ENSMICG00000000867	-	77	90.256	Microcebus_murinus
ENSTRUG00000004323	-	97	88.889	ENSMOCG00000020428	Cstf2t	89	72.491	Microtus_ochrogaster
ENSTRUG00000004323	-	96	84.615	ENSMALG00000008842	-	98	87.110	Monopterus_albus
ENSTRUG00000004323	-	51	88.889	MGP_CAROLIEiJ_G0022872	Cstf2t	99	59.447	Mus_caroli
ENSTRUG00000004323	-	51	88.889	ENSMUSG00000053536	Cstf2t	91	74.648	Mus_musculus
ENSTRUG00000004323	-	51	88.889	MGP_PahariEiJ_G0014365	Cstf2t	79	86.190	Mus_pahari
ENSTRUG00000004323	-	51	88.889	MGP_SPRETEiJ_G0023790	Cstf2t	99	58.945	Mus_spretus
ENSTRUG00000004323	-	97	52.389	ENSNLEG00000012025	CSTF2T	99	50.322	Nomascus_leucogenys
ENSTRUG00000004323	-	96	53.719	ENSODEG00000012386	CSTF2T	74	90.256	Octodon_degus
ENSTRUG00000004323	-	97	58.497	ENSOCUG00000004647	-	99	56.036	Oryctolagus_cuniculus
ENSTRUG00000004323	-	97	53.270	ENSPPRG00000018659	CSTF2T	89	75.984	Panthera_pardus
ENSTRUG00000004323	-	97	52.044	ENSPTIG00000021145	CSTF2T	79	90.256	Panthera_tigris_altaica
ENSTRUG00000004323	-	96	92.308	ENSPFOG00000016756	CSTF2T	99	85.981	Poecilia_formosa
ENSTRUG00000004323	-	97	52.978	ENSPPYG00000002441	CSTF2T	99	53.372	Pongo_abelii
ENSTRUG00000004323	-	97	54.295	ENSPCOG00000010982	CSTF2T	99	52.778	Propithecus_coquereli
ENSTRUG00000004323	-	97	52.681	ENSRNOG00000050289	Cstf2t	89	73.507	Rattus_norvegicus
ENSTRUG00000004323	-	97	52.031	ENSRBIG00000029324	CSTF2T	51	74.359	Rhinopithecus_bieti
ENSTRUG00000004323	-	97	52.556	ENSRROG00000042507	CSTF2T	51	74.359	Rhinopithecus_roxellana
ENSTRUG00000004323	-	97	54.207	ENSSBOG00000022638	CSTF2T	99	52.778	Saimiri_boliviensis_boliviensis
ENSTRUG00000004323	-	96	85.774	ENSSDUG00000001049	-	95	88.285	Seriola_dumerili
ENSTRUG00000004323	-	96	85.565	ENSSLDG00000010056	-	95	88.075	Seriola_lalandi_dorsalis
ENSTRUG00000004323	-	80	89.340	ENSSARG00000002013	-	78	89.744	Sorex_araneus
ENSTRUG00000004323	-	100	85.972	ENSSPAG00000009247	-	100	87.375	Stegastes_partitus
ENSTRUG00000004323	-	97	45.586	ENSTBEG00000014379	CSTF2T	89	57.198	Tupaia_belangeri
ENSTRUG00000004323	-	96	53.571	ENSTTRG00000003341	CSTF2T	99	60.664	Tursiops_truncatus
ENSTRUG00000004323	-	69	85.000	ENSVVUG00000002575	CSTF2T	53	78.017	Vulpes_vulpes