EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSTRUG00000004420 (Gene tree)
Gene ID: 101079317
Gene Symbol: thumpd3
Alias: cb255|sb:cb255|zgc:163086
Full Name: THUMP domain containing 3
Gene Type: protein_coding
Species: Takifugu_rubripes
Status: putative
Strand: Plus strand
Length: 7646 bases
Position: chr19:4971614-4979259
Accession: 101079317
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTRUP00000010507	THUMP	PF02926.17	7e-11	1	1
ENSTRUP00000056430	THUMP	PF02926.17	7e-11	1	1
ENSTRUP00000055190	THUMP	PF02926.17	8.1e-11	1	1
ENSTRUP00000056430	UPF0020	PF01170.18	4.1e-39	1	1
ENSTRUP00000010507	UPF0020	PF01170.18	4.4e-39	1	1
ENSTRUP00000055190	UPF0020	PF01170.18	5.1e-39	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTRUT00000049820	-	1266	-	ENSTRUP00000056430	421 (aa)	-	-
ENSTRUT00000056076	-	1368	XM_003973242	ENSTRUP00000055190	455 (aa)	XP_003973291	-
ENSTRUT00000010565	-	1293	-	ENSTRUP00000010507	430 (aa)	-	H2SDM6

Gene Model

Click here to download ENSTRUG00000004420's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTRUG00000004420's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTRUG00000004420	thumpd3	92	50.980	ENSG00000134077	THUMPD3	81	76.471	Homo_sapiens
ENSTRUG00000004420	thumpd3	95	75.385	ENSAPOG00000015836	thumpd3	97	73.830	Acanthochromis_polyacanthus
ENSTRUG00000004420	thumpd3	90	53.846	ENSAMEG00000011321	THUMPD3	90	53.846	Ailuropoda_melanoleuca
ENSTRUG00000004420	thumpd3	97	72.473	ENSACIG00000020096	thumpd3	98	71.074	Amphilophus_citrinellus
ENSTRUG00000004420	thumpd3	97	73.978	ENSAOCG00000004399	thumpd3	96	72.746	Amphiprion_ocellaris
ENSTRUG00000004420	thumpd3	96	75.381	ENSAPEG00000016740	thumpd3	96	73.585	Amphiprion_percula
ENSTRUG00000004420	thumpd3	99	72.199	ENSATEG00000005345	thumpd3	98	72.199	Anabas_testudineus
ENSTRUG00000004420	thumpd3	83	60.322	ENSAPLG00000003598	THUMPD3	95	60.858	Anas_platyrhynchos
ENSTRUG00000004420	thumpd3	90	53.390	ENSACAG00000014974	THUMPD3	91	53.814	Anolis_carolinensis
ENSTRUG00000004420	thumpd3	94	50.964	ENSANAG00000002365	THUMPD3	93	51.496	Aotus_nancymaae
ENSTRUG00000004420	thumpd3	84	48.750	ENSACLG00000013504	-	87	48.515	Astatotilapia_calliptera
ENSTRUG00000004420	thumpd3	99	71.518	ENSACLG00000023333	thumpd3	97	71.518	Astatotilapia_calliptera
ENSTRUG00000004420	thumpd3	98	63.057	ENSAMXG00000015683	thumpd3	99	63.080	Astyanax_mexicanus
ENSTRUG00000004420	thumpd3	92	52.609	ENSBTAG00000003112	THUMPD3	91	53.763	Bos_taurus
ENSTRUG00000004420	thumpd3	62	42.748	WBGene00010846	M04B2.2	64	43.130	Caenorhabditis_elegans
ENSTRUG00000004420	thumpd3	94	51.178	ENSCJAG00000015949	THUMPD3	92	51.606	Callithrix_jacchus
ENSTRUG00000004420	thumpd3	78	58.757	ENSCAFG00000008060	-	86	58.757	Canis_familiaris
ENSTRUG00000004420	thumpd3	92	52.891	ENSCAFG00000005499	THUMPD3	93	52.891	Canis_familiaris
ENSTRUG00000004420	thumpd3	84	59.631	ENSCAFG00020025887	-	88	59.631	Canis_lupus_dingo
ENSTRUG00000004420	thumpd3	92	52.891	ENSCAFG00020008895	-	93	52.891	Canis_lupus_dingo
ENSTRUG00000004420	thumpd3	90	53.304	ENSCHIG00000024037	THUMPD3	90	53.965	Capra_hircus
ENSTRUG00000004420	thumpd3	92	51.304	ENSTSYG00000000159	THUMPD3	97	50.513	Carlito_syrichta
ENSTRUG00000004420	thumpd3	69	51.211	ENSCAPG00000017486	THUMPD3	56	51.211	Cavia_aperea
ENSTRUG00000004420	thumpd3	93	51.398	ENSCPOG00000033287	THUMPD3	94	51.471	Cavia_porcellus
ENSTRUG00000004420	thumpd3	94	51.178	ENSCCAG00000027067	-	93	51.709	Cebus_capucinus
ENSTRUG00000004420	thumpd3	92	44.227	ENSCCAG00000021429	-	96	45.238	Cebus_capucinus
ENSTRUG00000004420	thumpd3	92	51.198	ENSCATG00000040999	THUMPD3	93	51.709	Cercocebus_atys
ENSTRUG00000004420	thumpd3	92	51.528	ENSCLAG00000000690	THUMPD3	94	51.477	Chinchilla_lanigera
ENSTRUG00000004420	thumpd3	92	51.198	ENSCSAG00000010753	THUMPD3	93	51.709	Chlorocebus_sabaeus
ENSTRUG00000004420	thumpd3	76	46.087	ENSCHOG00000012851	THUMPD3	75	46.087	Choloepus_hoffmanni
ENSTRUG00000004420	thumpd3	91	52.350	ENSCPBG00000014771	THUMPD3	92	53.419	Chrysemys_picta_bellii
ENSTRUG00000004420	thumpd3	90	40.698	ENSCSAVG00000008668	-	97	40.698	Ciona_savignyi
ENSTRUG00000004420	thumpd3	92	50.980	ENSCANG00000031901	THUMPD3	98	49.798	Colobus_angolensis_palliatus
ENSTRUG00000004420	thumpd3	90	52.527	ENSCGRG00001024117	Thumpd3	90	53.422	Cricetulus_griseus_chok1gshd
ENSTRUG00000004420	thumpd3	90	52.527	ENSCGRG00000018116	Thumpd3	90	53.422	Cricetulus_griseus_crigri
ENSTRUG00000004420	thumpd3	96	70.065	ENSCSEG00000002546	thumpd3	99	68.399	Cynoglossus_semilaevis
ENSTRUG00000004420	thumpd3	96	69.783	ENSCVAG00000001019	thumpd3	94	68.499	Cyprinodon_variegatus
ENSTRUG00000004420	thumpd3	95	58.386	ENSDARG00000059634	thumpd3	97	60.606	Danio_rerio
ENSTRUG00000004420	thumpd3	90	52.527	ENSDNOG00000047668	THUMPD3	88	53.626	Dasypus_novemcinctus
ENSTRUG00000004420	thumpd3	90	53.422	ENSDORG00000003257	Thumpd3	90	54.525	Dipodomys_ordii
ENSTRUG00000004420	thumpd3	55	46.535	ENSETEG00000020239	-	60	47.697	Echinops_telfairi
ENSTRUG00000004420	thumpd3	90	50.508	ENSEBUG00000004221	thumpd3	92	50.508	Eptatretus_burgeri
ENSTRUG00000004420	thumpd3	90	52.980	ENSEASG00005013327	THUMPD3	90	52.980	Equus_asinus_asinus
ENSTRUG00000004420	thumpd3	90	54.746	ENSECAG00000002016	THUMPD3	90	54.746	Equus_caballus
ENSTRUG00000004420	thumpd3	76	30.028	ENSEEUG00000000105	THUMPD2	78	30.028	Erinaceus_europaeus
ENSTRUG00000004420	thumpd3	92	47.921	ENSEEUG00000014696	THUMPD3	91	49.453	Erinaceus_europaeus
ENSTRUG00000004420	thumpd3	95	78.549	ENSELUG00000018246	thumpd3	84	74.780	Esox_lucius
ENSTRUG00000004420	thumpd3	90	51.876	ENSFCAG00000006171	THUMPD3	93	52.239	Felis_catus
ENSTRUG00000004420	thumpd3	84	50.342	ENSFALG00000013631	THUMPD3	92	50.790	Ficedula_albicollis
ENSTRUG00000004420	thumpd3	92	51.310	ENSFDAG00000014825	THUMPD3	93	52.034	Fukomys_damarensis
ENSTRUG00000004420	thumpd3	97	70.362	ENSFHEG00000006006	thumpd3	95	70.316	Fundulus_heteroclitus
ENSTRUG00000004420	thumpd3	98	62.924	ENSGMOG00000007923	thumpd3	96	62.924	Gadus_morhua
ENSTRUG00000004420	thumpd3	92	49.896	ENSGALG00000044813	THUMPD3	97	50.924	Gallus_gallus
ENSTRUG00000004420	thumpd3	97	72.052	ENSGAFG00000021645	thumpd3	95	71.398	Gambusia_affinis
ENSTRUG00000004420	thumpd3	97	69.444	ENSGACG00000000930	thumpd3	99	69.444	Gasterosteus_aculeatus
ENSTRUG00000004420	thumpd3	93	51.959	ENSGAGG00000022750	THUMPD3	94	52.165	Gopherus_agassizii
ENSTRUG00000004420	thumpd3	92	50.763	ENSGGOG00000000604	THUMPD3	92	51.496	Gorilla_gorilla
ENSTRUG00000004420	thumpd3	99	71.518	ENSHBUG00000013405	thumpd3	97	71.518	Haplochromis_burtoni
ENSTRUG00000004420	thumpd3	93	51.732	ENSHGLG00000016200	THUMPD3	93	51.282	Heterocephalus_glaber_female
ENSTRUG00000004420	thumpd3	90	45.778	ENSHGLG00100000505	-	95	45.316	Heterocephalus_glaber_male
ENSTRUG00000004420	thumpd3	93	50.756	ENSHGLG00100017321	-	93	51.386	Heterocephalus_glaber_male
ENSTRUG00000004420	thumpd3	96	69.083	ENSHCOG00000004871	thumpd3	99	69.214	Hippocampus_comes
ENSTRUG00000004420	thumpd3	95	64.192	ENSIPUG00000019415	THUMPD3	94	64.192	Ictalurus_punctatus
ENSTRUG00000004420	thumpd3	90	52.318	ENSSTOG00000003973	THUMPD3	90	53.422	Ictidomys_tridecemlineatus
ENSTRUG00000004420	thumpd3	96	46.973	ENSJJAG00000017751	Thumpd3	95	47.551	Jaculus_jaculus
ENSTRUG00000004420	thumpd3	96	71.304	ENSKMAG00000021025	thumpd3	91	70.105	Kryptolebias_marmoratus
ENSTRUG00000004420	thumpd3	98	73.060	ENSLBEG00000012252	thumpd3	97	72.117	Labrus_bergylta
ENSTRUG00000004420	thumpd3	90	52.838	ENSLACG00000018604	THUMPD3	90	53.377	Latimeria_chalumnae
ENSTRUG00000004420	thumpd3	95	54.890	ENSLOCG00000009800	thumpd3	94	57.974	Lepisosteus_oculatus
ENSTRUG00000004420	thumpd3	92	54.130	ENSLAFG00000005103	THUMPD3	91	54.130	Loxodonta_africana
ENSTRUG00000004420	thumpd3	91	50.972	ENSMFAG00000044884	THUMPD3	92	52.052	Macaca_fascicularis
ENSTRUG00000004420	thumpd3	91	50.972	ENSMMUG00000017307	THUMPD3	92	52.052	Macaca_mulatta
ENSTRUG00000004420	thumpd3	91	50.972	ENSMNEG00000030529	THUMPD3	92	52.052	Macaca_nemestrina
ENSTRUG00000004420	thumpd3	92	51.416	ENSMLEG00000032943	THUMPD3	93	51.923	Mandrillus_leucophaeus
ENSTRUG00000004420	thumpd3	99	70.975	ENSMAMG00000023934	thumpd3	96	71.702	Mastacembelus_armatus
ENSTRUG00000004420	thumpd3	99	71.518	ENSMZEG00005010623	thumpd3	97	71.518	Maylandia_zebra
ENSTRUG00000004420	thumpd3	83	59.140	ENSMGAG00000010182	THUMPD3	93	59.140	Meleagris_gallopavo
ENSTRUG00000004420	thumpd3	90	52.412	ENSMAUG00000012250	Thumpd3	90	53.524	Mesocricetus_auratus
ENSTRUG00000004420	thumpd3	91	50.000	ENSMICG00000010095	THUMPD3	93	50.103	Microcebus_murinus
ENSTRUG00000004420	thumpd3	93	51.055	ENSMOCG00000020148	Thumpd3	94	52.331	Microtus_ochrogaster
ENSTRUG00000004420	thumpd3	98	73.876	ENSMMOG00000021791	thumpd3	99	74.304	Mola_mola
ENSTRUG00000004420	thumpd3	93	51.250	ENSMODG00000004715	-	96	51.116	Monodelphis_domestica
ENSTRUG00000004420	thumpd3	92	72.912	ENSMALG00000017316	thumpd3	98	71.739	Monopterus_albus
ENSTRUG00000004420	thumpd3	53	41.806	MGP_CAROLIEiJ_G0028714	-	62	43.000	Mus_caroli
ENSTRUG00000004420	thumpd3	93	51.398	ENSMUSG00000030264	Thumpd3	92	52.258	Mus_musculus
ENSTRUG00000004420	thumpd3	93	51.183	MGP_PahariEiJ_G0022465	Thumpd3	95	51.153	Mus_pahari
ENSTRUG00000004420	thumpd3	93	51.398	MGP_SPRETEiJ_G0029742	Thumpd3	92	52.258	Mus_spretus
ENSTRUG00000004420	thumpd3	90	49.889	ENSMPUG00000005219	-	90	49.889	Mustela_putorius_furo
ENSTRUG00000004420	thumpd3	92	53.813	ENSMPUG00000017066	-	91	53.813	Mustela_putorius_furo
ENSTRUG00000004420	thumpd3	93	51.168	ENSMLUG00000008538	THUMPD3	92	51.812	Myotis_lucifugus
ENSTRUG00000004420	thumpd3	90	52.203	ENSNGAG00000021014	-	90	53.524	Nannospalax_galili
ENSTRUG00000004420	thumpd3	90	47.857	ENSNGAG00000001549	-	89	48.571	Nannospalax_galili
ENSTRUG00000004420	thumpd3	99	71.429	ENSNBRG00000004886	thumpd3	97	71.429	Neolamprologus_brichardi
ENSTRUG00000004420	thumpd3	94	50.535	ENSNLEG00000003863	THUMPD3	93	51.915	Nomascus_leucogenys
ENSTRUG00000004420	thumpd3	86	57.772	ENSMEUG00000009819	THUMPD3	92	58.290	Notamacropus_eugenii
ENSTRUG00000004420	thumpd3	87	58.673	ENSOPRG00000002020	THUMPD3	93	59.694	Ochotona_princeps
ENSTRUG00000004420	thumpd3	72	54.573	ENSODEG00000018242	THUMPD3	93	55.793	Octodon_degus
ENSTRUG00000004420	thumpd3	96	74.236	ENSONIG00000018977	thumpd3	94	73.491	Oreochromis_niloticus
ENSTRUG00000004420	thumpd3	54	30.303	ENSONIG00000001165	thumpd2	52	30.303	Oreochromis_niloticus
ENSTRUG00000004420	thumpd3	85	53.470	ENSOANG00000014481	THUMPD3	91	54.731	Ornithorhynchus_anatinus
ENSTRUG00000004420	thumpd3	90	53.524	ENSOCUG00000010921	THUMPD3	90	54.079	Oryctolagus_cuniculus
ENSTRUG00000004420	thumpd3	50	32.000	ENSOCUG00000003257	THUMPD2	53	32.000	Oryctolagus_cuniculus
ENSTRUG00000004420	thumpd3	68	30.178	ENSORLG00000002138	thumpd2	67	30.029	Oryzias_latipes
ENSTRUG00000004420	thumpd3	96	70.575	ENSORLG00000000676	thumpd3	94	70.575	Oryzias_latipes
ENSTRUG00000004420	thumpd3	56	32.500	ENSORLG00020018792	thumpd2	77	30.178	Oryzias_latipes_hni
ENSTRUG00000004420	thumpd3	96	71.239	ENSORLG00020007509	thumpd3	94	71.239	Oryzias_latipes_hni
ENSTRUG00000004420	thumpd3	96	71.239	ENSORLG00015003615	thumpd3	94	71.239	Oryzias_latipes_hsok
ENSTRUG00000004420	thumpd3	98	68.376	ENSOMEG00000014115	thumpd3	97	68.790	Oryzias_melastigma
ENSTRUG00000004420	thumpd3	86	56.443	ENSOGAG00000017111	THUMPD3	94	56.443	Otolemur_garnettii
ENSTRUG00000004420	thumpd3	90	53.509	ENSOARG00000007139	THUMPD3	88	54.447	Ovis_aries
ENSTRUG00000004420	thumpd3	94	50.321	ENSPPAG00000025852	THUMPD3	92	51.702	Pan_paniscus
ENSTRUG00000004420	thumpd3	90	52.539	ENSPPRG00000008071	THUMPD3	90	53.863	Panthera_pardus
ENSTRUG00000004420	thumpd3	90	52.318	ENSPTIG00000017923	THUMPD3	90	53.642	Panthera_tigris_altaica
ENSTRUG00000004420	thumpd3	92	50.763	ENSPTRG00000014585	THUMPD3	92	51.489	Pan_troglodytes
ENSTRUG00000004420	thumpd3	92	50.763	ENSPANG00000016253	THUMPD3	92	51.282	Papio_anubis
ENSTRUG00000004420	thumpd3	96	59.664	ENSPKIG00000014009	thumpd3	98	59.544	Paramormyrops_kingsleyae
ENSTRUG00000004420	thumpd3	93	49.385	ENSPSIG00000007370	THUMPD3	96	49.590	Pelodiscus_sinensis
ENSTRUG00000004420	thumpd3	97	68.319	ENSPMGG00000017563	thumpd3	99	67.660	Periophthalmus_magnuspinnatus
ENSTRUG00000004420	thumpd3	90	53.201	ENSPEMG00000022411	Thumpd3	93	52.878	Peromyscus_maniculatus_bairdii
ENSTRUG00000004420	thumpd3	90	45.726	ENSPMAG00000001291	thumpd3	98	48.055	Petromyzon_marinus
ENSTRUG00000004420	thumpd3	93	50.928	ENSPCIG00000002049	THUMPD3	94	51.753	Phascolarctos_cinereus
ENSTRUG00000004420	thumpd3	97	71.030	ENSPFOG00000002318	thumpd3	95	70.253	Poecilia_formosa
ENSTRUG00000004420	thumpd3	97	71.030	ENSPLAG00000014804	thumpd3	95	70.253	Poecilia_latipinna
ENSTRUG00000004420	thumpd3	97	71.030	ENSPMEG00000000582	thumpd3	95	70.253	Poecilia_mexicana
ENSTRUG00000004420	thumpd3	97	71.002	ENSPREG00000009176	thumpd3	95	70.798	Poecilia_reticulata
ENSTRUG00000004420	thumpd3	92	50.763	ENSPPYG00000029461	THUMPD3	93	51.489	Pongo_abelii
ENSTRUG00000004420	thumpd3	85	41.995	ENSPPYG00000017616	-	76	41.995	Pongo_abelii
ENSTRUG00000004420	thumpd3	87	56.599	ENSPCAG00000015398	THUMPD3	94	57.035	Procavia_capensis
ENSTRUG00000004420	thumpd3	79	46.377	ENSPCOG00000023618	-	94	46.602	Propithecus_coquereli
ENSTRUG00000004420	thumpd3	92	44.156	ENSPCOG00000018095	-	92	45.788	Propithecus_coquereli
ENSTRUG00000004420	thumpd3	92	52.070	ENSPVAG00000008721	THUMPD3	94	51.681	Pteropus_vampyrus
ENSTRUG00000004420	thumpd3	99	71.518	ENSPNYG00000006918	thumpd3	97	71.518	Pundamilia_nyererei
ENSTRUG00000004420	thumpd3	56	31.224	ENSPNAG00000023224	thumpd2	53	31.020	Pygocentrus_nattereri
ENSTRUG00000004420	thumpd3	95	64.097	ENSPNAG00000014936	thumpd3	95	64.097	Pygocentrus_nattereri
ENSTRUG00000004420	thumpd3	90	51.322	ENSRNOG00000006941	Thumpd3	90	51.982	Rattus_norvegicus
ENSTRUG00000004420	thumpd3	92	51.304	ENSRBIG00000035954	THUMPD3	93	51.812	Rhinopithecus_bieti
ENSTRUG00000004420	thumpd3	92	51.087	ENSRROG00000035734	THUMPD3	93	51.599	Rhinopithecus_roxellana
ENSTRUG00000004420	thumpd3	92	52.183	ENSSBOG00000023567	THUMPD3	94	52.527	Saimiri_boliviensis_boliviensis
ENSTRUG00000004420	thumpd3	90	51.828	ENSSHAG00000014467	THUMPD3	91	52.903	Sarcophilus_harrisii
ENSTRUG00000004420	thumpd3	96	63.169	ENSSFOG00015019210	thumpd3	95	63.169	Scleropages_formosus
ENSTRUG00000004420	thumpd3	96	75.000	ENSSMAG00000000609	thumpd3	96	75.000	Scophthalmus_maximus
ENSTRUG00000004420	thumpd3	99	73.486	ENSSDUG00000012179	thumpd3	98	74.518	Seriola_dumerili
ENSTRUG00000004420	thumpd3	99	73.695	ENSSLDG00000022028	thumpd3	97	73.695	Seriola_lalandi_dorsalis
ENSTRUG00000004420	thumpd3	76	63.636	ENSSARG00000002239	THUMPD3	79	63.636	Sorex_araneus
ENSTRUG00000004420	thumpd3	92	50.725	ENSSPUG00000017461	THUMPD3	95	51.346	Sphenodon_punctatus
ENSTRUG00000004420	thumpd3	97	74.026	ENSSPAG00000008345	thumpd3	95	73.207	Stegastes_partitus
ENSTRUG00000004420	thumpd3	90	54.286	ENSSSCG00000011542	THUMPD3	96	52.664	Sus_scrofa
ENSTRUG00000004420	thumpd3	89	54.139	ENSTGUG00000010440	THUMPD3	100	54.586	Taeniopygia_guttata
ENSTRUG00000004420	thumpd3	97	77.363	ENSTNIG00000014627	thumpd3	99	77.412	Tetraodon_nigroviridis
ENSTRUG00000004420	thumpd3	93	52.146	ENSTBEG00000003450	THUMPD3	91	53.004	Tupaia_belangeri
ENSTRUG00000004420	thumpd3	92	52.941	ENSTTRG00000009694	THUMPD3	91	54.031	Tursiops_truncatus
ENSTRUG00000004420	thumpd3	90	53.744	ENSUAMG00000009412	THUMPD3	90	53.744	Ursus_americanus
ENSTRUG00000004420	thumpd3	92	54.462	ENSUMAG00000019241	THUMPD3	91	54.920	Ursus_maritimus
ENSTRUG00000004420	thumpd3	73	50.131	ENSVPAG00000002855	THUMPD3	93	49.612	Vicugna_pacos
ENSTRUG00000004420	thumpd3	92	53.319	ENSVVUG00000025278	THUMPD3	93	53.319	Vulpes_vulpes
ENSTRUG00000004420	thumpd3	94	53.928	ENSXETG00000001447	thumpd3	94	52.977	Xenopus_tropicalis
ENSTRUG00000004420	thumpd3	98	70.763	ENSXCOG00000000159	thumpd3	99	70.763	Xiphophorus_couchianus
ENSTRUG00000004420	thumpd3	97	70.940	ENSXMAG00000001423	thumpd3	95	70.526	Xiphophorus_maculatus