EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTRUG00000004518 (Gene tree)
Gene ID: 101072128
Gene Symbol: rbm27
Alias: si:dkey-149g3.2
Full Name: RNA binding motif protein 27
Gene Type: protein_coding
Species: Takifugu_rubripes
Status: putative
Strand: Plus strand
Length: 12022 bases
Position: chr15:1779507-1791528
Accession: 101072128
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTRUP00000010726	RRM_1	PF00076.22	7.3e-07	1	1
ENSTRUP00000010726	PWI	PF01480.17	3.4e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTRUT00000010784	-	5648	XM_011611064	ENSTRUP00000010726	1027 (aa)	XP_011609366	H2SE95

Gene Model

Click here to download ENSTRUG00000004518's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTRUG00000004518's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTRUG00000004518	rbm27	71	56.618	ENSTRUG00000017189	rbm26	81	59.483

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTRUG00000004518	rbm27	100	44.803	ENSG00000091009	RBM27	69	51.270	Homo_sapiens
ENSTRUG00000004518	rbm27	54	38.366	ENSAPOG00000014508	rbm26	68	35.538	Acanthochromis_polyacanthus
ENSTRUG00000004518	rbm27	100	81.333	ENSAPOG00000000301	rbm27	100	81.905	Acanthochromis_polyacanthus
ENSTRUG00000004518	rbm27	100	44.347	ENSAMEG00000017593	-	77	45.776	Ailuropoda_melanoleuca
ENSTRUG00000004518	rbm27	78	77.561	ENSACIG00000014111	rbm27	100	75.000	Amphilophus_citrinellus
ENSTRUG00000004518	rbm27	100	80.835	ENSAOCG00000016767	rbm27	100	81.784	Amphiprion_ocellaris
ENSTRUG00000004518	rbm27	100	81.084	ENSAPEG00000017681	rbm27	100	81.749	Amphiprion_percula
ENSTRUG00000004518	rbm27	100	79.258	ENSATEG00000010385	rbm27	100	78.877	Anabas_testudineus
ENSTRUG00000004518	rbm27	59	41.810	ENSAPLG00000011536	RBM26	77	40.700	Anas_platyrhynchos
ENSTRUG00000004518	rbm27	59	49.433	ENSAPLG00000009309	-	86	64.602	Anas_platyrhynchos
ENSTRUG00000004518	rbm27	56	51.096	ENSACAG00000014177	-	67	67.692	Anolis_carolinensis
ENSTRUG00000004518	rbm27	100	46.594	ENSANAG00000034039	-	66	61.947	Aotus_nancymaae
ENSTRUG00000004518	rbm27	100	75.596	ENSACLG00000010782	rbm27	100	75.024	Astatotilapia_calliptera
ENSTRUG00000004518	rbm27	100	56.425	ENSAMXG00000029605	rbm27	100	60.878	Astyanax_mexicanus
ENSTRUG00000004518	rbm27	100	46.393	ENSBTAG00000011642	RBM27	76	48.268	Bos_taurus
ENSTRUG00000004518	rbm27	100	47.101	ENSCJAG00000021308	-	67	60.000	Callithrix_jacchus
ENSTRUG00000004518	rbm27	59	39.528	ENSCJAG00000021261	RBM26	74	39.438	Callithrix_jacchus
ENSTRUG00000004518	rbm27	100	44.522	ENSCAFG00000006456	-	70	51.111	Canis_familiaris
ENSTRUG00000004518	rbm27	98	43.800	ENSCAFG00020024931	-	71	51.111	Canis_lupus_dingo
ENSTRUG00000004518	rbm27	59	42.386	ENSCAFG00020024152	RBM26	76	41.832	Canis_lupus_dingo
ENSTRUG00000004518	rbm27	100	44.688	ENSCHIG00000009045	-	78	45.590	Capra_hircus
ENSTRUG00000004518	rbm27	59	39.780	ENSCHIG00000021849	RBM26	74	39.368	Capra_hircus
ENSTRUG00000004518	rbm27	98	49.854	ENSTSYG00000004303	-	71	52.063	Carlito_syrichta
ENSTRUG00000004518	rbm27	78	40.666	ENSCAPG00000007138	-	77	94.118	Cavia_aperea
ENSTRUG00000004518	rbm27	80	46.900	ENSCPOG00000002498	-	71	55.072	Cavia_porcellus
ENSTRUG00000004518	rbm27	73	64.865	ENSCPOG00000021081	RBM26	92	64.865	Cavia_porcellus
ENSTRUG00000004518	rbm27	98	50.146	ENSCCAG00000015866	-	66	61.607	Cebus_capucinus
ENSTRUG00000004518	rbm27	100	45.399	ENSCATG00000035545	-	66	61.607	Cercocebus_atys
ENSTRUG00000004518	rbm27	100	46.259	ENSCLAG00000016106	-	76	48.024	Chinchilla_lanigera
ENSTRUG00000004518	rbm27	100	45.153	ENSCSAG00000012270	-	69	51.587	Chlorocebus_sabaeus
ENSTRUG00000004518	rbm27	77	87.179	ENSCHOG00000002831	-	76	73.529	Choloepus_hoffmanni
ENSTRUG00000004518	rbm27	96	50.486	ENSCPBG00000008390	-	76	52.121	Chrysemys_picta_bellii
ENSTRUG00000004518	rbm27	81	50.407	ENSCING00000003516	zf(c3h)-9	80	50.000	Ciona_intestinalis
ENSTRUG00000004518	rbm27	100	45.818	ENSCANG00000040932	-	77	47.909	Colobus_angolensis_palliatus
ENSTRUG00000004518	rbm27	100	41.822	ENSCGRG00001018200	Rbm27	74	49.223	Cricetulus_griseus_chok1gshd
ENSTRUG00000004518	rbm27	98	46.197	ENSCGRG00000006403	Rbm27	78	48.029	Cricetulus_griseus_crigri
ENSTRUG00000004518	rbm27	71	60.833	ENSCSEG00000016514	rbm26	88	57.463	Cynoglossus_semilaevis
ENSTRUG00000004518	rbm27	100	74.240	ENSCSEG00000014910	rbm27	100	74.620	Cynoglossus_semilaevis
ENSTRUG00000004518	rbm27	86	80.612	ENSCVAG00000014585	rbm27	95	76.190	Cyprinodon_variegatus
ENSTRUG00000004518	rbm27	65	62.518	ENSDARG00000060521	rbm27	100	62.862	Danio_rerio
ENSTRUG00000004518	rbm27	98	49.560	ENSDNOG00000019753	-	70	51.828	Dasypus_novemcinctus
ENSTRUG00000004518	rbm27	98	49.854	ENSDORG00000013392	Rbm27	66	67.692	Dipodomys_ordii
ENSTRUG00000004518	rbm27	54	58.824	FBgn0002044	swm	52	58.824	Drosophila_melanogaster
ENSTRUG00000004518	rbm27	54	45.559	ENSEBUG00000003376	rbm26	78	41.398	Eptatretus_burgeri
ENSTRUG00000004518	rbm27	100	42.151	ENSEASG00005020588	-	77	45.610	Equus_asinus_asinus
ENSTRUG00000004518	rbm27	98	49.275	ENSECAG00000000883	-	76	55.072	Equus_caballus
ENSTRUG00000004518	rbm27	100	44.056	ENSEEUG00000010335	-	77	45.017	Erinaceus_europaeus
ENSTRUG00000004518	rbm27	100	62.417	ENSELUG00000023148	rbm27	100	63.534	Esox_lucius
ENSTRUG00000004518	rbm27	68	60.920	ENSELUG00000003110	rbm26	84	42.941	Esox_lucius
ENSTRUG00000004518	rbm27	100	45.902	ENSFCAG00000005792	-	76	48.091	Felis_catus
ENSTRUG00000004518	rbm27	84	50.970	ENSFALG00000003228	-	64	64.035	Ficedula_albicollis
ENSTRUG00000004518	rbm27	59	41.509	ENSFDAG00000011365	RBM26	75	41.098	Fukomys_damarensis
ENSTRUG00000004518	rbm27	98	50.146	ENSFDAG00000017029	-	76	48.445	Fukomys_damarensis
ENSTRUG00000004518	rbm27	100	71.698	ENSFHEG00000010494	rbm27	100	73.302	Fundulus_heteroclitus
ENSTRUG00000004518	rbm27	91	81.373	ENSGMOG00000013610	rbm27	89	74.615	Gadus_morhua
ENSTRUG00000004518	rbm27	57	53.542	ENSGALG00000007516	-	76	51.644	Gallus_gallus
ENSTRUG00000004518	rbm27	82	73.465	ENSGAFG00000005005	rbm27	100	73.769	Gambusia_affinis
ENSTRUG00000004518	rbm27	100	70.193	ENSGACG00000020719	rbm27	100	69.991	Gasterosteus_aculeatus
ENSTRUG00000004518	rbm27	94	48.214	ENSGAGG00000002126	-	76	50.061	Gopherus_agassizii
ENSTRUG00000004518	rbm27	100	44.716	ENSGGOG00000013312	-	67	56.061	Gorilla_gorilla
ENSTRUG00000004518	rbm27	100	75.668	ENSHBUG00000003077	rbm27	100	75.095	Haplochromis_burtoni
ENSTRUG00000004518	rbm27	100	46.807	ENSHGLG00000004076	RBM27	76	47.847	Heterocephalus_glaber_female
ENSTRUG00000004518	rbm27	98	46.097	ENSHGLG00100003022	-	69	59.868	Heterocephalus_glaber_male
ENSTRUG00000004518	rbm27	90	70.312	ENSHCOG00000003684	rbm27	100	69.578	Hippocampus_comes
ENSTRUG00000004518	rbm27	59	39.553	ENSHCOG00000000066	rbm26	81	37.748	Hippocampus_comes
ENSTRUG00000004518	rbm27	100	60.095	ENSIPUG00000012280	rbm27	100	61.064	Ictalurus_punctatus
ENSTRUG00000004518	rbm27	100	46.807	ENSSTOG00000002378	-	76	48.263	Ictidomys_tridecemlineatus
ENSTRUG00000004518	rbm27	100	42.983	ENSJJAG00000010911	Rbm27	63	91.667	Jaculus_jaculus
ENSTRUG00000004518	rbm27	59	42.543	ENSJJAG00000022458	Rbm26	75	41.262	Jaculus_jaculus
ENSTRUG00000004518	rbm27	100	74.458	ENSKMAG00000009801	rbm27	100	75.024	Kryptolebias_marmoratus
ENSTRUG00000004518	rbm27	100	78.788	ENSLBEG00000025151	rbm27	100	79.356	Labrus_bergylta
ENSTRUG00000004518	rbm27	96	46.834	ENSLACG00000008729	rbm27	68	65.385	Latimeria_chalumnae
ENSTRUG00000004518	rbm27	96	56.715	ENSLOCG00000010426	rbm27	99	58.718	Lepisosteus_oculatus
ENSTRUG00000004518	rbm27	98	49.706	ENSLAFG00000022447	-	77	45.238	Loxodonta_africana
ENSTRUG00000004518	rbm27	59	42.543	ENSLAFG00000010689	RBM26	74	40.958	Loxodonta_africana
ENSTRUG00000004518	rbm27	100	47.373	ENSMFAG00000042337	-	68	65.152	Macaca_fascicularis
ENSTRUG00000004518	rbm27	100	45.414	ENSMMUG00000004476	RBM27	67	65.152	Macaca_mulatta
ENSTRUG00000004518	rbm27	94	42.634	ENSMNEG00000037798	-	77	51.587	Macaca_nemestrina
ENSTRUG00000004518	rbm27	100	45.153	ENSMLEG00000032857	-	69	51.587	Mandrillus_leucophaeus
ENSTRUG00000004518	rbm27	96	75.421	ENSMAMG00000021382	rbm27	100	71.831	Mastacembelus_armatus
ENSTRUG00000004518	rbm27	100	75.596	ENSMZEG00005002635	rbm27	100	75.119	Maylandia_zebra
ENSTRUG00000004518	rbm27	65	78.333	ENSMGAG00000014927	RBM26	84	49.242	Meleagris_gallopavo
ENSTRUG00000004518	rbm27	84	51.832	ENSMGAG00000009467	-	96	54.428	Meleagris_gallopavo
ENSTRUG00000004518	rbm27	100	46.776	ENSMAUG00000007657	Rbm27	75	48.964	Mesocricetus_auratus
ENSTRUG00000004518	rbm27	100	45.184	ENSMICG00000003262	-	72	51.118	Microcebus_murinus
ENSTRUG00000004518	rbm27	100	47.263	ENSMOCG00000019479	Rbm27	75	49.482	Microtus_ochrogaster
ENSTRUG00000004518	rbm27	100	70.398	ENSMMOG00000013809	rbm27	100	70.213	Mola_mola
ENSTRUG00000004518	rbm27	90	50.706	ENSMODG00000010182	-	78	46.886	Monodelphis_domestica
ENSTRUG00000004518	rbm27	100	71.704	ENSMALG00000018514	rbm27	100	70.144	Monopterus_albus
ENSTRUG00000004518	rbm27	100	47.263	MGP_CAROLIEiJ_G0022226	Rbm27	76	48.024	Mus_caroli
ENSTRUG00000004518	rbm27	100	46.795	ENSMUSG00000024491	Rbm27	76	48.144	Mus_musculus
ENSTRUG00000004518	rbm27	100	47.172	MGP_PahariEiJ_G0018959	Rbm27	76	48.024	Mus_pahari
ENSTRUG00000004518	rbm27	100	47.263	MGP_SPRETEiJ_G0023136	Rbm27	76	48.144	Mus_spretus
ENSTRUG00000004518	rbm27	100	44.105	ENSMPUG00000007832	-	77	45.610	Mustela_putorius_furo
ENSTRUG00000004518	rbm27	100	42.932	ENSMLUG00000000643	-	77	45.704	Myotis_lucifugus
ENSTRUG00000004518	rbm27	100	47.493	ENSNGAG00000016316	Rbm27	76	48.337	Nannospalax_galili
ENSTRUG00000004518	rbm27	69	62.069	ENSNBRG00000018981	rbm26	87	57.143	Neolamprologus_brichardi
ENSTRUG00000004518	rbm27	100	77.333	ENSNBRG00000005739	rbm27	100	76.762	Neolamprologus_brichardi
ENSTRUG00000004518	rbm27	100	45.066	ENSNLEG00000009886	-	67	58.678	Nomascus_leucogenys
ENSTRUG00000004518	rbm27	64	47.980	ENSMEUG00000004031	-	55	66.923	Notamacropus_eugenii
ENSTRUG00000004518	rbm27	78	61.818	ENSOPRG00000005424	-	72	61.818	Ochotona_princeps
ENSTRUG00000004518	rbm27	96	45.297	ENSODEG00000005515	-	67	64.394	Octodon_degus
ENSTRUG00000004518	rbm27	100	77.557	ENSONIG00000008506	rbm27	100	77.557	Oreochromis_niloticus
ENSTRUG00000004518	rbm27	98	45.200	ENSOANG00000012563	-	77	46.462	Ornithorhynchus_anatinus
ENSTRUG00000004518	rbm27	100	45.486	ENSOCUG00000000186	-	70	51.270	Oryctolagus_cuniculus
ENSTRUG00000004518	rbm27	82	70.616	ENSORLG00000001645	rbm27	100	67.871	Oryzias_latipes
ENSTRUG00000004518	rbm27	56	43.624	ENSORLG00000004434	rbm26	73	41.045	Oryzias_latipes
ENSTRUG00000004518	rbm27	82	70.534	ENSORLG00020019863	rbm27	100	68.471	Oryzias_latipes_hni
ENSTRUG00000004518	rbm27	82	70.616	ENSORLG00015003753	rbm27	100	68.346	Oryzias_latipes_hsok
ENSTRUG00000004518	rbm27	82	71.644	ENSOMEG00000005785	rbm27	100	72.480	Oryzias_melastigma
ENSTRUG00000004518	rbm27	100	45.192	ENSOGAG00000008758	-	70	51.189	Otolemur_garnettii
ENSTRUG00000004518	rbm27	54	43.782	ENSOGAG00000009171	RBM26	75	41.626	Otolemur_garnettii
ENSTRUG00000004518	rbm27	100	45.503	ENSOARG00000002840	-	68	65.649	Ovis_aries
ENSTRUG00000004518	rbm27	100	46.231	ENSPPAG00000039646	-	76	48.082	Pan_paniscus
ENSTRUG00000004518	rbm27	100	44.561	ENSPPRG00000021227	-	77	45.767	Panthera_pardus
ENSTRUG00000004518	rbm27	100	44.561	ENSPTIG00000013051	-	77	45.767	Panthera_tigris_altaica
ENSTRUG00000004518	rbm27	100	46.231	ENSPTRG00000017373	-	76	48.082	Pan_troglodytes
ENSTRUG00000004518	rbm27	98	45.063	ENSPANG00000015776	-	66	61.607	Papio_anubis
ENSTRUG00000004518	rbm27	97	45.059	ENSPKIG00000024548	-	100	43.318	Paramormyrops_kingsleyae
ENSTRUG00000004518	rbm27	82	39.797	ENSPKIG00000019670	rbm26	78	39.415	Paramormyrops_kingsleyae
ENSTRUG00000004518	rbm27	64	58.396	ENSPKIG00000006776	-	100	58.262	Paramormyrops_kingsleyae
ENSTRUG00000004518	rbm27	59	51.587	ENSPSIG00000016084	-	76	52.727	Pelodiscus_sinensis
ENSTRUG00000004518	rbm27	59	40.747	ENSPSIG00000007431	RBM26	75	40.602	Pelodiscus_sinensis
ENSTRUG00000004518	rbm27	62	83.333	ENSPMGG00000017880	rbm26	82	83.333	Periophthalmus_magnuspinnatus
ENSTRUG00000004518	rbm27	58	69.282	ENSPMGG00000019541	rbm27	97	66.428	Periophthalmus_magnuspinnatus
ENSTRUG00000004518	rbm27	100	46.624	ENSPEMG00000014312	Rbm27	75	47.784	Peromyscus_maniculatus_bairdii
ENSTRUG00000004518	rbm27	94	43.415	ENSPCIG00000025797	-	87	49.764	Phascolarctos_cinereus
ENSTRUG00000004518	rbm27	100	72.133	ENSPFOG00000003105	rbm27	100	73.839	Poecilia_formosa
ENSTRUG00000004518	rbm27	100	72.053	ENSPLAG00000000373	rbm27	100	73.669	Poecilia_latipinna
ENSTRUG00000004518	rbm27	100	72.133	ENSPMEG00000018569	rbm27	100	73.839	Poecilia_mexicana
ENSTRUG00000004518	rbm27	73	57.246	ENSPMEG00000017151	rbm26	85	61.538	Poecilia_mexicana
ENSTRUG00000004518	rbm27	90	55.474	ENSPREG00000021003	rbm26	74	40.245	Poecilia_reticulata
ENSTRUG00000004518	rbm27	82	74.679	ENSPREG00000005827	rbm27	97	74.796	Poecilia_reticulata
ENSTRUG00000004518	rbm27	100	44.891	ENSPPYG00000015909	-	69	51.429	Pongo_abelii
ENSTRUG00000004518	rbm27	70	59.615	ENSPCAG00000014786	-	54	91.525	Procavia_capensis
ENSTRUG00000004518	rbm27	59	42.229	ENSPCOG00000017206	RBM26	71	41.469	Propithecus_coquereli
ENSTRUG00000004518	rbm27	80	46.439	ENSPCOG00000022256	-	63	49.029	Propithecus_coquereli
ENSTRUG00000004518	rbm27	100	44.081	ENSPVAG00000005218	-	77	45.109	Pteropus_vampyrus
ENSTRUG00000004518	rbm27	100	76.218	ENSPNYG00000015348	rbm27	100	75.549	Pundamilia_nyererei
ENSTRUG00000004518	rbm27	73	51.592	ENSPNAG00000003024	rbm26	87	56.489	Pygocentrus_nattereri
ENSTRUG00000004518	rbm27	64	63.238	ENSPNAG00000027218	rbm27	100	63.073	Pygocentrus_nattereri
ENSTRUG00000004518	rbm27	100	45.351	ENSRNOG00000027250	Rbm27	70	50.872	Rattus_norvegicus
ENSTRUG00000004518	rbm27	76	47.443	ENSRBIG00000036925	-	53	67.010	Rhinopithecus_bieti
ENSTRUG00000004518	rbm27	100	45.153	ENSRROG00000043836	-	66	60.526	Rhinopithecus_roxellana
ENSTRUG00000004518	rbm27	91	44.477	ENSSBOG00000031813	RBM26	87	54.861	Saimiri_boliviensis_boliviensis
ENSTRUG00000004518	rbm27	98	49.854	ENSSBOG00000034172	-	66	61.607	Saimiri_boliviensis_boliviensis
ENSTRUG00000004518	rbm27	80	50.549	ENSSHAG00000006988	-	70	51.577	Sarcophilus_harrisii
ENSTRUG00000004518	rbm27	77	40.170	ENSSFOG00015005311	rbm26	79	41.413	Scleropages_formosus
ENSTRUG00000004518	rbm27	96	55.885	ENSSFOG00015018009	rbm27	100	53.941	Scleropages_formosus
ENSTRUG00000004518	rbm27	100	73.390	ENSSMAG00000004138	rbm27	100	71.955	Scophthalmus_maximus
ENSTRUG00000004518	rbm27	100	79.320	ENSSDUG00000021085	rbm27	100	78.848	Seriola_dumerili
ENSTRUG00000004518	rbm27	100	79.735	ENSSLDG00000006922	rbm27	100	79.072	Seriola_lalandi_dorsalis
ENSTRUG00000004518	rbm27	98	41.941	ENSSARG00000000313	-	65	62.376	Sorex_araneus
ENSTRUG00000004518	rbm27	96	46.110	ENSSPUG00000013753	-	87	48.246	Sphenodon_punctatus
ENSTRUG00000004518	rbm27	96	75.719	ENSSPAG00000012000	rbm27	100	73.942	Stegastes_partitus
ENSTRUG00000004518	rbm27	54	50.602	ENSTGUG00000000085	-	76	49.874	Taeniopygia_guttata
ENSTRUG00000004518	rbm27	100	74.678	ENSTNIG00000018215	rbm27	100	76.406	Tetraodon_nigroviridis
ENSTRUG00000004518	rbm27	100	44.611	ENSTTRG00000016713	-	77	45.413	Tursiops_truncatus
ENSTRUG00000004518	rbm27	88	42.829	ENSUAMG00000019864	-	71	45.211	Ursus_americanus
ENSTRUG00000004518	rbm27	59	42.927	ENSUMAG00000013370	RBM26	74	41.729	Ursus_maritimus
ENSTRUG00000004518	rbm27	95	42.816	ENSUMAG00000010569	-	78	47.971	Ursus_maritimus
ENSTRUG00000004518	rbm27	81	62.500	ENSVPAG00000000558	-	67	65.649	Vicugna_pacos
ENSTRUG00000004518	rbm27	100	45.852	ENSVVUG00000021131	-	76	47.976	Vulpes_vulpes
ENSTRUG00000004518	rbm27	73	55.195	ENSVVUG00000014196	RBM26	87	54.861	Vulpes_vulpes
ENSTRUG00000004518	rbm27	57	42.626	ENSXETG00000017810	rbm26	96	41.732	Xenopus_tropicalis
ENSTRUG00000004518	rbm27	96	47.296	ENSXETG00000002322	rbm27	99	48.197	Xenopus_tropicalis
ENSTRUG00000004518	rbm27	69	70.000	ENSXCOG00000001827	rbm26	90	70.000	Xiphophorus_couchianus
ENSTRUG00000004518	rbm27	65	75.152	ENSXCOG00000005859	rbm27	76	72.299	Xiphophorus_couchianus
ENSTRUG00000004518	rbm27	71	60.684	ENSXMAG00000001679	rbm26	87	57.692	Xiphophorus_maculatus
ENSTRUG00000004518	rbm27	100	74.172	ENSXMAG00000001413	rbm27	100	73.510	Xiphophorus_maculatus