EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTRUG00000004525 (Gene tree)
Gene ID: 101070633
Gene Symbol: gfi1b
Alias: si:ch211-231o6.2
Full Name: growth factor independent 1B transcriptional repressor
Gene Type: protein_coding
Species: Takifugu_rubripes
Status: putative
Strand: Minus strand
Length: 2785 bases
Position: chrHE591817.1:46747-49531
Accession: 101070633
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTRUP00000010747	zf-C2H2	PF00096.26	2e-23	1	5
ENSTRUP00000010747	zf-C2H2	PF00096.26	2e-23	2	5
ENSTRUP00000010747	zf-C2H2	PF00096.26	2e-23	3	5
ENSTRUP00000010747	zf-C2H2	PF00096.26	2e-23	4	5
ENSTRUP00000010747	zf-C2H2	PF00096.26	2e-23	5	5
ENSTRUP00000010747	zf-met	PF12874.7	1.2e-07	1	2
ENSTRUP00000010747	zf-met	PF12874.7	1.2e-07	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTRUT00000010805	-	1482	XM_003978377	ENSTRUP00000010747	327 (aa)	XP_003978426	H2SEB6

Gene Model

Click here to download ENSTRUG00000004525's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTRUG00000004525's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTRUG00000004525	gfi1b	61	43.382	ENSTRUG00000001268	-	96	43.382
ENSTRUG00000004525	gfi1b	51	41.875	ENSTRUG00000023491	-	59	41.875
ENSTRUG00000004525	gfi1b	100	52.083	ENSTRUG00000000415	gfi1ab	100	52.356
ENSTRUG00000004525	gfi1b	100	32.800	ENSTRUG00000000419	sna2	98	32.800
ENSTRUG00000004525	gfi1b	55	42.500	ENSTRUG00000019940	-	53	42.500
ENSTRUG00000004525	gfi1b	50	44.118	ENSTRUG00000003111	-	80	44.118
ENSTRUG00000004525	gfi1b	51	46.269	ENSTRUG00000005180	-	82	46.269
ENSTRUG00000004525	gfi1b	52	44.928	ENSTRUG00000006896	-	84	44.643
ENSTRUG00000004525	gfi1b	52	44.578	ENSTRUG00000013906	-	93	44.578
ENSTRUG00000004525	gfi1b	71	42.500	ENSTRUG00000015687	-	92	40.964
ENSTRUG00000004525	gfi1b	57	41.765	ENSTRUG00000003277	zbtb17	92	41.880
ENSTRUG00000004525	gfi1b	56	43.885	ENSTRUG00000003454	-	67	43.885
ENSTRUG00000004525	gfi1b	58	43.210	ENSTRUG00000017456	znf236	56	43.210
ENSTRUG00000004525	gfi1b	54	44.361	ENSTRUG00000019685	znf319b	84	44.361
ENSTRUG00000004525	gfi1b	54	50.435	ENSTRUG00000012273	-	75	50.435
ENSTRUG00000004525	gfi1b	100	49.754	ENSTRUG00000004744	gfi1aa	100	50.493
ENSTRUG00000004525	gfi1b	54	42.735	ENSTRUG00000023925	-	61	42.735
ENSTRUG00000004525	gfi1b	69	44.578	ENSTRUG00000000995	-	80	44.578
ENSTRUG00000004525	gfi1b	55	39.759	ENSTRUG00000021675	-	72	39.157
ENSTRUG00000004525	gfi1b	52	37.956	ENSTRUG00000025588	snai2	54	37.956
ENSTRUG00000004525	gfi1b	56	46.324	ENSTRUG00000022919	-	67	46.324
ENSTRUG00000004525	gfi1b	56	44.720	ENSTRUG00000024073	-	62	44.720
ENSTRUG00000004525	gfi1b	54	39.362	ENSTRUG00000025881	-	66	39.362
ENSTRUG00000004525	gfi1b	100	41.071	ENSTRUG00000011637	scrt1b	96	41.071
ENSTRUG00000004525	gfi1b	58	42.384	ENSTRUG00000022066	-	88	44.144
ENSTRUG00000004525	gfi1b	52	44.853	ENSTRUG00000021765	-	54	44.853
ENSTRUG00000004525	gfi1b	51	47.748	ENSTRUG00000025189	-	63	47.748
ENSTRUG00000004525	gfi1b	52	40.994	ENSTRUG00000022843	-	57	40.994
ENSTRUG00000004525	gfi1b	58	44.361	ENSTRUG00000012157	-	87	44.361
ENSTRUG00000004525	gfi1b	53	38.158	ENSTRUG00000014476	-	81	38.158
ENSTRUG00000004525	gfi1b	52	36.076	ENSTRUG00000001452	PRDM15	60	34.810
ENSTRUG00000004525	gfi1b	55	43.452	ENSTRUG00000019483	-	94	43.452
ENSTRUG00000004525	gfi1b	51	43.165	ENSTRUG00000020582	-	89	43.165
ENSTRUG00000004525	gfi1b	62	38.843	ENSTRUG00000025597	znf646	61	38.843
ENSTRUG00000004525	gfi1b	52	42.767	ENSTRUG00000020208	-	56	42.767
ENSTRUG00000004525	gfi1b	54	41.463	ENSTRUG00000013850	prdm5	72	41.463
ENSTRUG00000004525	gfi1b	61	33.557	ENSTRUG00000005241	gtf3ab	59	33.557
ENSTRUG00000004525	gfi1b	62	40.698	ENSTRUG00000022076	-	80	40.698
ENSTRUG00000004525	gfi1b	51	47.183	ENSTRUG00000007022	-	70	45.000
ENSTRUG00000004525	gfi1b	54	43.089	ENSTRUG00000005321	-	94	41.284

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTRUG00000004525	gfi1b	100	77.676	ENSAPOG00000001296	gfi1b	100	77.676	Acanthochromis_polyacanthus
ENSTRUG00000004525	gfi1b	99	68.997	ENSACIG00000002190	gfi1b	99	68.997	Amphilophus_citrinellus
ENSTRUG00000004525	gfi1b	100	77.982	ENSAOCG00000021187	gfi1b	100	77.982	Amphiprion_ocellaris
ENSTRUG00000004525	gfi1b	100	77.982	ENSAPEG00000016196	gfi1b	100	77.982	Amphiprion_percula
ENSTRUG00000004525	gfi1b	100	80.243	ENSATEG00000002534	gfi1b	100	80.243	Anabas_testudineus
ENSTRUG00000004525	gfi1b	100	58.721	ENSAPLG00000003373	GFI1B	100	58.721	Anas_platyrhynchos
ENSTRUG00000004525	gfi1b	99	74.312	ENSACLG00000027053	gfi1b	99	74.312	Astatotilapia_calliptera
ENSTRUG00000004525	gfi1b	100	67.560	ENSAMXG00000037544	GFI1B	100	67.560	Astyanax_mexicanus
ENSTRUG00000004525	gfi1b	100	57.227	ENSCAPG00000010404	GFI1B	100	57.227	Cavia_aperea
ENSTRUG00000004525	gfi1b	100	57.307	ENSCPBG00000021186	GFI1B	100	57.307	Chrysemys_picta_bellii
ENSTRUG00000004525	gfi1b	100	76.364	ENSCSEG00000001315	gfi1b	100	76.364	Cynoglossus_semilaevis
ENSTRUG00000004525	gfi1b	100	74.468	ENSCVAG00000017168	gfi1b	100	74.468	Cyprinodon_variegatus
ENSTRUG00000004525	gfi1b	100	66.471	ENSDARG00000079947	gfi1b	99	81.435	Danio_rerio
ENSTRUG00000004525	gfi1b	62	51.471	ENSEEUG00000012609	-	90	51.471	Erinaceus_europaeus
ENSTRUG00000004525	gfi1b	100	70.623	ENSELUG00000016933	gfi1b	100	70.623	Esox_lucius
ENSTRUG00000004525	gfi1b	100	53.951	ENSFALG00000001479	GFI1B	100	53.951	Ficedula_albicollis
ENSTRUG00000004525	gfi1b	100	78.354	ENSFHEG00000015138	gfi1b	100	78.354	Fundulus_heteroclitus
ENSTRUG00000004525	gfi1b	74	81.481	ENSGMOG00000019123	gfi1b	91	81.481	Gadus_morhua
ENSTRUG00000004525	gfi1b	100	57.143	ENSGALG00000003478	GFI1B	100	57.143	Gallus_gallus
ENSTRUG00000004525	gfi1b	72	91.026	ENSGAFG00000003059	gfi1b	100	91.026	Gambusia_affinis
ENSTRUG00000004525	gfi1b	100	73.371	ENSGACG00000018134	gfi1b	100	73.371	Gasterosteus_aculeatus
ENSTRUG00000004525	gfi1b	100	56.805	ENSGAGG00000021327	GFI1B	100	56.805	Gopherus_agassizii
ENSTRUG00000004525	gfi1b	99	74.312	ENSHBUG00000005451	gfi1b	99	74.312	Haplochromis_burtoni
ENSTRUG00000004525	gfi1b	100	73.700	ENSHCOG00000013713	gfi1b	100	73.700	Hippocampus_comes
ENSTRUG00000004525	gfi1b	100	70.359	ENSIPUG00000012769	gfi1b	100	70.359	Ictalurus_punctatus
ENSTRUG00000004525	gfi1b	99	54.324	ENSJJAG00000016355	Gfi1b	100	54.324	Jaculus_jaculus
ENSTRUG00000004525	gfi1b	100	76.877	ENSKMAG00000016047	gfi1b	100	76.877	Kryptolebias_marmoratus
ENSTRUG00000004525	gfi1b	100	77.946	ENSLBEG00000020297	gfi1b	99	78.248	Labrus_bergylta
ENSTRUG00000004525	gfi1b	100	58.529	ENSLACG00000012207	GFI1B	100	58.529	Latimeria_chalumnae
ENSTRUG00000004525	gfi1b	100	65.476	ENSLOCG00000005750	gfi1b	100	65.476	Lepisosteus_oculatus
ENSTRUG00000004525	gfi1b	100	58.824	ENSLAFG00000022367	GFI1B	100	59.226	Loxodonta_africana
ENSTRUG00000004525	gfi1b	100	83.537	ENSMAMG00000003040	gfi1b	100	83.537	Mastacembelus_armatus
ENSTRUG00000004525	gfi1b	99	74.006	ENSMZEG00005015594	gfi1b	99	74.006	Maylandia_zebra
ENSTRUG00000004525	gfi1b	100	57.835	ENSMGAG00000006129	GFI1B	100	57.835	Meleagris_gallopavo
ENSTRUG00000004525	gfi1b	100	84.195	ENSMMOG00000011764	gfi1b	100	84.195	Mola_mola
ENSTRUG00000004525	gfi1b	100	52.617	ENSMODG00000012600	GFI1B	100	52.617	Monodelphis_domestica
ENSTRUG00000004525	gfi1b	100	81.402	ENSMALG00000004034	gfi1b	100	81.402	Monopterus_albus
ENSTRUG00000004525	gfi1b	99	58.610	ENSNGAG00000003333	Gfi1b	100	58.610	Nannospalax_galili
ENSTRUG00000004525	gfi1b	51	67.164	ENSNBRG00000012376	-	99	67.164	Neolamprologus_brichardi
ENSTRUG00000004525	gfi1b	99	74.390	ENSNBRG00000012391	gfi1b	99	74.390	Neolamprologus_brichardi
ENSTRUG00000004525	gfi1b	99	74.695	ENSONIG00000013011	gfi1b	94	92.179	Oreochromis_niloticus
ENSTRUG00000004525	gfi1b	100	60.423	ENSOANG00000014723	GFI1B	100	60.423	Ornithorhynchus_anatinus
ENSTRUG00000004525	gfi1b	100	60.366	ENSORLG00000014390	GFI1B	96	69.203	Oryzias_latipes
ENSTRUG00000004525	gfi1b	100	75.000	ENSORLG00020003719	GFI1B	100	75.000	Oryzias_latipes_hni
ENSTRUG00000004525	gfi1b	100	74.695	ENSORLG00015017142	gfi1b	100	74.695	Oryzias_latipes_hsok
ENSTRUG00000004525	gfi1b	100	74.390	ENSOMEG00000015149	GFI1B	100	74.695	Oryzias_melastigma
ENSTRUG00000004525	gfi1b	100	57.647	ENSOGAG00000008879	GFI1B	100	59.821	Otolemur_garnettii
ENSTRUG00000004525	gfi1b	100	67.262	ENSPKIG00000007643	gfi1b	100	67.262	Paramormyrops_kingsleyae
ENSTRUG00000004525	gfi1b	100	57.584	ENSPSIG00000012112	GFI1B	100	57.584	Pelodiscus_sinensis
ENSTRUG00000004525	gfi1b	99	67.470	ENSPMGG00000006021	gfi1b	99	67.470	Periophthalmus_magnuspinnatus
ENSTRUG00000004525	gfi1b	100	52.989	ENSPCIG00000019724	GFI1B	100	52.989	Phascolarctos_cinereus
ENSTRUG00000004525	gfi1b	100	77.545	ENSPFOG00000003460	gfi1b	100	77.545	Poecilia_formosa
ENSTRUG00000004525	gfi1b	100	78.659	ENSPLAG00000021960	GFI1B	100	78.659	Poecilia_latipinna
ENSTRUG00000004525	gfi1b	100	76.627	ENSPLAG00000017181	GFI1B	100	76.627	Poecilia_latipinna
ENSTRUG00000004525	gfi1b	100	78.659	ENSPMEG00000001556	GFI1B	100	78.659	Poecilia_mexicana
ENSTRUG00000004525	gfi1b	100	78.659	ENSPMEG00000019220	gfi1b	100	78.659	Poecilia_mexicana
ENSTRUG00000004525	gfi1b	100	78.963	ENSPREG00000021718	gfi1b	100	78.963	Poecilia_reticulata
ENSTRUG00000004525	gfi1b	99	73.394	ENSPNYG00000018422	gfi1b	99	73.394	Pundamilia_nyererei
ENSTRUG00000004525	gfi1b	100	69.552	ENSPNAG00000021118	gfi1b	100	69.552	Pygocentrus_nattereri
ENSTRUG00000004525	gfi1b	100	47.594	ENSSHAG00000006462	GFI1B	100	47.594	Sarcophilus_harrisii
ENSTRUG00000004525	gfi1b	83	58.763	ENSSFOG00015011566	gfi1b	90	58.763	Scleropages_formosus
ENSTRUG00000004525	gfi1b	100	77.508	ENSSMAG00000015181	gfi1b	98	77.508	Scophthalmus_maximus
ENSTRUG00000004525	gfi1b	100	79.878	ENSSDUG00000011604	gfi1b	100	79.878	Seriola_dumerili
ENSTRUG00000004525	gfi1b	100	79.878	ENSSLDG00000013823	gfi1b	100	79.878	Seriola_lalandi_dorsalis
ENSTRUG00000004525	gfi1b	100	48.159	ENSSPUG00000016039	GFI1B	100	48.159	Sphenodon_punctatus
ENSTRUG00000004525	gfi1b	100	79.205	ENSSPAG00000022914	gfi1b	100	79.205	Stegastes_partitus
ENSTRUG00000004525	gfi1b	51	91.228	ENSTGUG00000005282	-	99	91.228	Taeniopygia_guttata
ENSTRUG00000004525	gfi1b	100	91.768	ENSTNIG00000003834	gfi1b	100	91.768	Tetraodon_nigroviridis
ENSTRUG00000004525	gfi1b	100	42.090	ENSTBEG00000014459	GFI1B	100	42.090	Tupaia_belangeri
ENSTRUG00000004525	gfi1b	100	56.932	ENSXETG00000006263	gfi1b	100	57.227	Xenopus_tropicalis
ENSTRUG00000004525	gfi1b	100	78.354	ENSXMAG00000027589	gfi1b	100	78.354	Xiphophorus_maculatus