EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTRUG00000004615 (Gene tree)
Gene ID: 101068273
Gene Symbol: fubp1
Alias: wu:fa92h11|wu:fb24h11|wu:fc26f06|zgc:66046
Full Name: far upstream element binding protein 1
Gene Type: protein_coding
Species: Takifugu_rubripes
Status: putative
Strand: Minus strand
Length: 12906 bases
Position: chr22:4241281-4254186
Accession: 101068273
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTRUP00000010976	KH_1	PF00013.29	2.4e-66	1	4
ENSTRUP00000010976	KH_1	PF00013.29	2.4e-66	2	4
ENSTRUP00000010976	KH_1	PF00013.29	2.4e-66	3	4
ENSTRUP00000010976	KH_1	PF00013.29	2.4e-66	4	4
ENSTRUP00000010975	KH_1	PF00013.29	2.8e-66	1	4
ENSTRUP00000010975	KH_1	PF00013.29	2.8e-66	2	4
ENSTRUP00000010975	KH_1	PF00013.29	2.8e-66	3	4
ENSTRUP00000010975	KH_1	PF00013.29	2.8e-66	4	4
ENSTRUP00000010976	KH_2	PF07650.17	3.8e-20	1	1
ENSTRUP00000010975	KH_2	PF07650.17	4.3e-20	1	1
ENSTRUP00000010976	DUF1897	PF09005.10	3.4e-18	1	2
ENSTRUP00000010976	DUF1897	PF09005.10	3.4e-18	2	2
ENSTRUP00000010975	DUF1897	PF09005.10	3.8e-18	1	2
ENSTRUP00000010975	DUF1897	PF09005.10	3.8e-18	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTRUT00000011034	-	7037	-	ENSTRUP00000010975	691 (aa)	-	H2SEZ4
ENSTRUT00000011035	-	7260	XM_011616265	ENSTRUP00000010976	672 (aa)	XP_011614567	H2SEZ5

Gene Model

Click here to download ENSTRUG00000004615's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTRUG00000004615's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTRUG00000004615	fubp1	59	34.667	ENSTRUG00000013604	pcbp3	63	34.667
ENSTRUG00000004615	fubp1	50	34.177	ENSTRUG00000019498	NOVA2	62	34.177
ENSTRUG00000004615	fubp1	85	48.983	ENSTRUG00000013259	-	89	57.561
ENSTRUG00000004615	fubp1	84	48.969	ENSTRUG00000018658	fubp3	73	56.674
ENSTRUG00000004615	fubp1	57	43.056	ENSTRUG00000011419	PCBP2	95	43.056
ENSTRUG00000004615	fubp1	56	39.726	ENSTRUG00000009361	pcbp2	90	39.726
ENSTRUG00000004615	fubp1	52	30.435	ENSTRUG00000006094	igf2bp3	63	30.435

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTRUG00000004615	fubp1	65	77.511	ENSG00000162613	FUBP1	93	72.139	Homo_sapiens
ENSTRUG00000004615	fubp1	88	92.180	ENSAPOG00000014845	fubp1	89	93.201	Acanthochromis_polyacanthus
ENSTRUG00000004615	fubp1	65	74.012	ENSAMEG00000007372	FUBP1	93	69.649	Ailuropoda_melanoleuca
ENSTRUG00000004615	fubp1	100	80.764	ENSACIG00000020024	fubp1	100	80.910	Amphilophus_citrinellus
ENSTRUG00000004615	fubp1	85	86.587	ENSAPEG00000012232	fubp1	96	88.027	Amphiprion_percula
ENSTRUG00000004615	fubp1	100	88.791	ENSATEG00000018619	fubp1	100	89.086	Anabas_testudineus
ENSTRUG00000004615	fubp1	65	74.841	ENSACAG00000006310	FUBP1	93	66.715	Anolis_carolinensis
ENSTRUG00000004615	fubp1	100	88.479	ENSACLG00000006708	fubp1	100	89.365	Astatotilapia_calliptera
ENSTRUG00000004615	fubp1	88	78.856	ENSAMXG00000005525	fubp1	99	80.763	Astyanax_mexicanus
ENSTRUG00000004615	fubp1	65	78.146	ENSCJAG00000007062	FUBP1	93	72.575	Callithrix_jacchus
ENSTRUG00000004615	fubp1	65	77.729	ENSCAFG00000020361	FUBP1	93	72.305	Canis_familiaris
ENSTRUG00000004615	fubp1	57	83.041	ENSTSYG00000000148	FUBP1	96	71.672	Carlito_syrichta
ENSTRUG00000004615	fubp1	51	82.540	ENSCAPG00000011052	-	65	82.540	Cavia_aperea
ENSTRUG00000004615	fubp1	65	77.729	ENSCPOG00000002757	FUBP1	98	70.548	Cavia_porcellus
ENSTRUG00000004615	fubp1	65	63.610	ENSCCAG00000036537	FUBP1	91	65.644	Cebus_capucinus
ENSTRUG00000004615	fubp1	65	77.511	ENSCATG00000042126	FUBP1	93	72.139	Cercocebus_atys
ENSTRUG00000004615	fubp1	65	77.729	ENSCLAG00000005621	FUBP1	100	72.436	Chinchilla_lanigera
ENSTRUG00000004615	fubp1	65	77.511	ENSCSAG00000001402	FUBP1	93	72.139	Chlorocebus_sabaeus
ENSTRUG00000004615	fubp1	65	77.511	ENSCHOG00000008177	FUBP1	91	72.305	Choloepus_hoffmanni
ENSTRUG00000004615	fubp1	65	78.808	ENSCGRG00001007103	Fubp1	94	72.112	Cricetulus_griseus_chok1gshd
ENSTRUG00000004615	fubp1	60	79.426	ENSCGRG00000003372	Fubp1	98	69.863	Cricetulus_griseus_crigri
ENSTRUG00000004615	fubp1	100	84.661	ENSCSEG00000021412	fubp1	100	83.187	Cynoglossus_semilaevis
ENSTRUG00000004615	fubp1	99	86.834	ENSCVAG00000014487	fubp1	99	86.243	Cyprinodon_variegatus
ENSTRUG00000004615	fubp1	100	78.242	ENSDARG00000029248	fubp1	100	80.692	Danio_rerio
ENSTRUG00000004615	fubp1	74	47.973	ENSDNOG00000034565	-	80	48.456	Dasypus_novemcinctus
ENSTRUG00000004615	fubp1	85	77.827	ENSDORG00000016534	Fubp1	91	72.305	Dipodomys_ordii
ENSTRUG00000004615	fubp1	71	77.485	ENSETEG00000000948	-	55	79.257	Echinops_telfairi
ENSTRUG00000004615	fubp1	68	55.733	ENSEBUG00000016143	fubp1	67	55.733	Eptatretus_burgeri
ENSTRUG00000004615	fubp1	70	80.405	ENSEEUG00000001287	FUBP1	84	73.438	Erinaceus_europaeus
ENSTRUG00000004615	fubp1	100	80.087	ENSELUG00000007990	fubp1	100	80.814	Esox_lucius
ENSTRUG00000004615	fubp1	65	77.511	ENSFDAG00000014210	FUBP1	100	69.863	Fukomys_damarensis
ENSTRUG00000004615	fubp1	100	87.316	ENSFHEG00000005230	fubp1	100	86.873	Fundulus_heteroclitus
ENSTRUG00000004615	fubp1	100	72.938	ENSGMOG00000003370	fubp1	100	77.941	Gadus_morhua
ENSTRUG00000004615	fubp1	65	78.097	ENSGALG00000008939	FUBP1	95	71.966	Gallus_gallus
ENSTRUG00000004615	fubp1	100	86.212	ENSGAFG00000020972	fubp1	100	85.776	Gambusia_affinis
ENSTRUG00000004615	fubp1	100	83.187	ENSGACG00000016563	fubp1	100	83.333	Gasterosteus_aculeatus
ENSTRUG00000004615	fubp1	100	88.331	ENSHBUG00000009835	fubp1	100	89.365	Haplochromis_burtoni
ENSTRUG00000004615	fubp1	65	77.729	ENSHGLG00000008415	-	100	72.436	Heterocephalus_glaber_female
ENSTRUG00000004615	fubp1	100	65.366	ENSHGLG00000002808	-	97	62.921	Heterocephalus_glaber_female
ENSTRUG00000004615	fubp1	100	65.097	ENSHGLG00100001414	-	97	62.660	Heterocephalus_glaber_male
ENSTRUG00000004615	fubp1	65	77.729	ENSHGLG00100003417	-	93	71.782	Heterocephalus_glaber_male
ENSTRUG00000004615	fubp1	100	85.694	ENSHCOG00000000910	fubp1	100	85.222	Hippocampus_comes
ENSTRUG00000004615	fubp1	100	79.179	ENSIPUG00000009896	fubp1	100	82.991	Ictalurus_punctatus
ENSTRUG00000004615	fubp1	65	78.523	ENSSTOG00000014312	FUBP1	93	72.305	Ictidomys_tridecemlineatus
ENSTRUG00000004615	fubp1	65	78.300	ENSJJAG00000020069	Fubp1	100	69.863	Jaculus_jaculus
ENSTRUG00000004615	fubp1	100	87.316	ENSKMAG00000018897	fubp1	100	86.009	Kryptolebias_marmoratus
ENSTRUG00000004615	fubp1	99	85.879	ENSLBEG00000012700	fubp1	98	86.000	Labrus_bergylta
ENSTRUG00000004615	fubp1	97	76.239	ENSLOCG00000003745	fubp1	99	75.676	Lepisosteus_oculatus
ENSTRUG00000004615	fubp1	65	74.633	ENSLAFG00000003273	FUBP1	96	72.420	Loxodonta_africana
ENSTRUG00000004615	fubp1	65	77.925	ENSMFAG00000031825	FUBP1	93	72.408	Macaca_fascicularis
ENSTRUG00000004615	fubp1	65	78.300	ENSMMUG00000002899	FUBP1	93	72.139	Macaca_mulatta
ENSTRUG00000004615	fubp1	65	77.511	ENSMNEG00000045212	FUBP1	93	72.139	Macaca_nemestrina
ENSTRUG00000004615	fubp1	99	86.608	ENSMAMG00000007489	fubp1	99	87.482	Mastacembelus_armatus
ENSTRUG00000004615	fubp1	100	88.183	ENSMZEG00005024298	fubp1	100	89.217	Maylandia_zebra
ENSTRUG00000004615	fubp1	60	78.744	ENSMGAG00000009424	FUBP1	96	71.698	Meleagris_gallopavo
ENSTRUG00000004615	fubp1	65	77.948	ENSMAUG00000016428	Fubp1	98	70.548	Mesocricetus_auratus
ENSTRUG00000004615	fubp1	65	78.523	ENSMOCG00000014751	Fubp1	98	69.863	Microtus_ochrogaster
ENSTRUG00000004615	fubp1	88	85.160	ENSMMOG00000019463	fubp1	99	85.835	Mola_mola
ENSTRUG00000004615	fubp1	100	88.496	ENSMALG00000015173	fubp1	100	88.496	Monopterus_albus
ENSTRUG00000004615	fubp1	65	78.842	MGP_CAROLIEiJ_G0025740	Fubp1	99	75.670	Mus_caroli
ENSTRUG00000004615	fubp1	65	78.619	ENSMUSG00000028034	Fubp1	99	75.479	Mus_musculus
ENSTRUG00000004615	fubp1	65	78.667	MGP_PahariEiJ_G0027191	Fubp1	99	75.526	Mus_pahari
ENSTRUG00000004615	fubp1	65	78.842	MGP_SPRETEiJ_G0026693	Fubp1	99	75.670	Mus_spretus
ENSTRUG00000004615	fubp1	65	73.859	ENSMLUG00000014802	FUBP1	93	69.586	Myotis_lucifugus
ENSTRUG00000004615	fubp1	65	74.834	ENSNGAG00000014302	Fubp1	98	69.863	Nannospalax_galili
ENSTRUG00000004615	fubp1	85	87.179	ENSNBRG00000015099	fubp1	96	88.547	Neolamprologus_brichardi
ENSTRUG00000004615	fubp1	65	72.527	ENSNLEG00000009772	FUBP1	93	70.383	Nomascus_leucogenys
ENSTRUG00000004615	fubp1	55	83.824	ENSMEUG00000007917	-	64	71.795	Notamacropus_eugenii
ENSTRUG00000004615	fubp1	64	84.906	ENSOPRG00000001175	FUBP1	92	60.631	Ochotona_princeps
ENSTRUG00000004615	fubp1	85	55.461	ENSODEG00000003657	-	91	54.352	Octodon_degus
ENSTRUG00000004615	fubp1	65	77.729	ENSODEG00000002600	-	100	69.863	Octodon_degus
ENSTRUG00000004615	fubp1	99	88.296	ENSONIG00000018381	fubp1	97	89.333	Oreochromis_niloticus
ENSTRUG00000004615	fubp1	56	79.897	ENSOANG00000009777	FUBP1	99	68.019	Ornithorhynchus_anatinus
ENSTRUG00000004615	fubp1	85	85.034	ENSORLG00000003540	fubp1	96	86.395	Oryzias_latipes
ENSTRUG00000004615	fubp1	100	87.001	ENSORLG00020005908	fubp1	97	86.530	Oryzias_latipes_hni
ENSTRUG00000004615	fubp1	100	86.706	ENSORLG00015008779	fubp1	99	87.556	Oryzias_latipes_hsok
ENSTRUG00000004615	fubp1	100	86.854	ENSOMEG00000021943	fubp1	100	85.776	Oryzias_melastigma
ENSTRUG00000004615	fubp1	65	73.706	ENSOGAG00000014233	FUBP1	93	69.206	Otolemur_garnettii
ENSTRUG00000004615	fubp1	65	78.146	ENSOARG00000013259	FUBP1	97	70.492	Ovis_aries
ENSTRUG00000004615	fubp1	65	77.729	ENSPPRG00000000413	FUBP1	93	72.305	Panthera_pardus
ENSTRUG00000004615	fubp1	65	77.729	ENSPTIG00000019450	FUBP1	93	72.305	Panthera_tigris_altaica
ENSTRUG00000004615	fubp1	61	78.810	ENSPSIG00000012965	FUBP1	100	66.717	Pelodiscus_sinensis
ENSTRUG00000004615	fubp1	99	76.878	ENSPMGG00000009060	fubp1	96	81.713	Periophthalmus_magnuspinnatus
ENSTRUG00000004615	fubp1	65	78.808	ENSPEMG00000021802	Fubp1	100	70.548	Peromyscus_maniculatus_bairdii
ENSTRUG00000004615	fubp1	58	56.485	ENSPMAG00000001644	-	91	59.211	Petromyzon_marinus
ENSTRUG00000004615	fubp1	100	87.758	ENSPFOG00000000238	fubp1	100	87.316	Poecilia_formosa
ENSTRUG00000004615	fubp1	85	88.095	ENSPLAG00000021170	fubp1	96	89.456	Poecilia_latipinna
ENSTRUG00000004615	fubp1	88	91.472	ENSPMEG00000004747	fubp1	99	92.475	Poecilia_mexicana
ENSTRUG00000004615	fubp1	100	87.758	ENSPREG00000017911	fubp1	100	87.316	Poecilia_reticulata
ENSTRUG00000004615	fubp1	67	77.371	ENSPPYG00000001219	-	65	80.140	Pongo_abelii
ENSTRUG00000004615	fubp1	65	78.492	ENSPCOG00000024974	FUBP1	93	72.305	Propithecus_coquereli
ENSTRUG00000004615	fubp1	65	71.834	ENSPVAG00000014637	FUBP1	91	67.662	Pteropus_vampyrus
ENSTRUG00000004615	fubp1	100	88.183	ENSPNYG00000004552	fubp1	100	89.217	Pundamilia_nyererei
ENSTRUG00000004615	fubp1	100	81.898	ENSPNAG00000016207	fubp1	100	82.920	Pygocentrus_nattereri
ENSTRUG00000004615	fubp1	65	78.842	ENSRNOG00000043370	Fubp1	94	72.213	Rattus_norvegicus
ENSTRUG00000004615	fubp1	65	77.632	ENSRBIG00000042950	FUBP1	93	72.139	Rhinopithecus_bieti
ENSTRUG00000004615	fubp1	65	77.632	ENSRROG00000043534	FUBP1	93	72.139	Rhinopithecus_roxellana
ENSTRUG00000004615	fubp1	65	77.729	ENSSBOG00000027299	FUBP1	94	73.228	Saimiri_boliviensis_boliviensis
ENSTRUG00000004615	fubp1	60	78.199	ENSSHAG00000005367	FUBP1	95	73.143	Sarcophilus_harrisii
ENSTRUG00000004615	fubp1	99	78.783	ENSSFOG00015010213	fubp1	99	78.635	Scleropages_formosus
ENSTRUG00000004615	fubp1	100	84.928	ENSSMAG00000012029	fubp1	98	84.827	Scophthalmus_maximus
ENSTRUG00000004615	fubp1	100	87.954	ENSSDUG00000007383	fubp1	98	88.389	Seriola_dumerili
ENSTRUG00000004615	fubp1	100	87.954	ENSSLDG00000022863	fubp1	98	88.389	Seriola_lalandi_dorsalis
ENSTRUG00000004615	fubp1	84	85.057	ENSSARG00000011730	FUBP1	67	86.047	Sorex_araneus
ENSTRUG00000004615	fubp1	99	65.805	ENSSPUG00000008389	FUBP1	97	65.318	Sphenodon_punctatus
ENSTRUG00000004615	fubp1	100	88.938	ENSSPAG00000010161	fubp1	100	89.233	Stegastes_partitus
ENSTRUG00000004615	fubp1	79	80.357	ENSTBEG00000017333	FUBP1	62	85.714	Tupaia_belangeri
ENSTRUG00000004615	fubp1	65	77.729	ENSTTRG00000000096	FUBP1	91	72.139	Tursiops_truncatus
ENSTRUG00000004615	fubp1	65	77.729	ENSVPAG00000004709	FUBP1	92	72.139	Vicugna_pacos
ENSTRUG00000004615	fubp1	100	75.477	ENSXCOG00000019354	fubp1	100	74.231	Xiphophorus_couchianus
ENSTRUG00000004615	fubp1	88	91.137	ENSXMAG00000007168	fubp1	99	92.140	Xiphophorus_maculatus