EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSTRUG00000004665 (Gene tree)
Gene ID: 101072627
Gene Symbol: tsr1
Alias: fc52b09|wu:fc52b09|zgc:123319
Full Name: TSR1%2C ribosome maturation factor
Gene Type: protein_coding
Species: Takifugu_rubripes
Status: putative
Strand: Plus strand
Length: 6049 bases
Position: chr11:6306693-6312741
Accession: 101072627
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTRUP00000011079	AARP2CN	PF08142.12	6.6e-22	1	1
ENSTRUP00000011077	AARP2CN	PF08142.12	2.1e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTRUT00000011137	-	3488	XM_011608525	ENSTRUP00000011077	826 (aa)	XP_011606827	H2SF96
ENSTRUT00000011139	-	1029	-	ENSTRUP00000011079	342 (aa)	-	H2SF98

Gene Model

Click here to download ENSTRUG00000004665's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTRUG00000004665's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTRUG00000004665	tsr1	98	56.740	ENSG00000167721	TSR1	98	56.235	Homo_sapiens
ENSTRUG00000004665	tsr1	100	82.697	ENSAPOG00000020891	tsr1	100	82.754	Acanthochromis_polyacanthus
ENSTRUG00000004665	tsr1	99	55.085	ENSAMEG00000007599	TSR1	99	54.866	Ailuropoda_melanoleuca
ENSTRUG00000004665	tsr1	100	81.763	ENSACIG00000007090	tsr1	100	81.719	Amphilophus_citrinellus
ENSTRUG00000004665	tsr1	100	83.755	ENSAOCG00000023284	tsr1	100	83.755	Amphiprion_ocellaris
ENSTRUG00000004665	tsr1	93	83.333	ENSAPEG00000008452	tsr1	100	83.333	Amphiprion_percula
ENSTRUG00000004665	tsr1	100	83.035	ENSATEG00000021961	tsr1	100	82.796	Anabas_testudineus
ENSTRUG00000004665	tsr1	91	59.049	ENSAPLG00000013422	TSR1	100	58.917	Anas_platyrhynchos
ENSTRUG00000004665	tsr1	86	48.814	ENSACAG00000000859	TSR1	92	49.746	Anolis_carolinensis
ENSTRUG00000004665	tsr1	98	57.055	ENSANAG00000031071	TSR1	98	56.933	Aotus_nancymaae
ENSTRUG00000004665	tsr1	100	82.388	ENSACLG00000007595	tsr1	99	83.394	Astatotilapia_calliptera
ENSTRUG00000004665	tsr1	97	71.988	ENSAMXG00000008470	tsr1	90	72.642	Astyanax_mexicanus
ENSTRUG00000004665	tsr1	99	57.455	ENSBTAG00000004225	TSR1	99	56.848	Bos_taurus
ENSTRUG00000004665	tsr1	96	39.506	WBGene00006497	tag-151	96	38.471	Caenorhabditis_elegans
ENSTRUG00000004665	tsr1	97	56.158	ENSCJAG00000012456	TSR1	98	56.034	Callithrix_jacchus
ENSTRUG00000004665	tsr1	99	56.174	ENSCAFG00000002106	-	99	56.015	Canis_familiaris
ENSTRUG00000004665	tsr1	94	50.000	ENSCAFG00000019273	-	100	58.457	Canis_familiaris
ENSTRUG00000004665	tsr1	99	55.932	ENSCAFG00020009728	TSR1	99	55.772	Canis_lupus_dingo
ENSTRUG00000004665	tsr1	99	57.627	ENSCHIG00000023935	TSR1	99	57.022	Capra_hircus
ENSTRUG00000004665	tsr1	99	56.136	ENSTSYG00000005468	TSR1	99	56.416	Carlito_syrichta
ENSTRUG00000004665	tsr1	92	55.222	ENSCPOG00000014833	TSR1	99	55.123	Cavia_porcellus
ENSTRUG00000004665	tsr1	92	55.411	ENSCCAG00000028962	TSR1	98	55.280	Cebus_capucinus
ENSTRUG00000004665	tsr1	98	56.916	ENSCATG00000044262	TSR1	99	56.654	Cercocebus_atys
ENSTRUG00000004665	tsr1	99	55.961	ENSCLAG00000005567	TSR1	99	55.273	Chinchilla_lanigera
ENSTRUG00000004665	tsr1	98	57.038	ENSCSAG00000013788	TSR1	99	56.777	Chlorocebus_sabaeus
ENSTRUG00000004665	tsr1	98	56.707	ENSCPBG00000020363	TSR1	97	57.108	Chrysemys_picta_bellii
ENSTRUG00000004665	tsr1	96	45.253	ENSCING00000020658	-	99	45.006	Ciona_intestinalis
ENSTRUG00000004665	tsr1	96	44.750	ENSCSAVG00000001875	-	100	45.125	Ciona_savignyi
ENSTRUG00000004665	tsr1	98	50.306	ENSCANG00000033056	TSR1	99	52.869	Colobus_angolensis_palliatus
ENSTRUG00000004665	tsr1	99	54.545	ENSCGRG00001023942	Tsr1	99	55.006	Cricetulus_griseus_chok1gshd
ENSTRUG00000004665	tsr1	100	77.831	ENSCSEG00000013009	tsr1	100	78.313	Cynoglossus_semilaevis
ENSTRUG00000004665	tsr1	100	81.062	ENSCVAG00000000506	tsr1	100	80.458	Cyprinodon_variegatus
ENSTRUG00000004665	tsr1	99	75.816	ENSDARG00000007744	tsr1	99	75.695	Danio_rerio
ENSTRUG00000004665	tsr1	99	58.202	ENSDNOG00000004715	TSR1	99	59.772	Dasypus_novemcinctus
ENSTRUG00000004665	tsr1	96	49.496	ENSDORG00000023234	-	99	49.370	Dipodomys_ordii
ENSTRUG00000004665	tsr1	99	56.189	ENSDORG00000016371	-	99	55.865	Dipodomys_ordii
ENSTRUG00000004665	tsr1	96	43.558	FBgn0037073	Tsr1	96	43.120	Drosophila_melanogaster
ENSTRUG00000004665	tsr1	87	68.197	ENSETEG00000017534	TSR1	89	68.197	Echinops_telfairi
ENSTRUG00000004665	tsr1	94	51.975	ENSEBUG00000013731	TSR1	97	50.641	Eptatretus_burgeri
ENSTRUG00000004665	tsr1	99	57.264	ENSEASG00005009302	TSR1	97	56.987	Equus_asinus_asinus
ENSTRUG00000004665	tsr1	99	57.143	ENSECAG00000009114	TSR1	99	56.987	Equus_caballus
ENSTRUG00000004665	tsr1	100	75.120	ENSELUG00000020984	tsr1	96	74.251	Esox_lucius
ENSTRUG00000004665	tsr1	99	56.553	ENSFCAG00000006313	TSR1	99	56.227	Felis_catus
ENSTRUG00000004665	tsr1	99	58.667	ENSFALG00000006532	TSR1	99	58.374	Ficedula_albicollis
ENSTRUG00000004665	tsr1	99	56.326	ENSFDAG00000006038	TSR1	99	55.583	Fukomys_damarensis
ENSTRUG00000004665	tsr1	100	80.599	ENSFHEG00000003626	tsr1	99	80.359	Fundulus_heteroclitus
ENSTRUG00000004665	tsr1	100	72.323	ENSGMOG00000010336	tsr1	100	72.289	Gadus_morhua
ENSTRUG00000004665	tsr1	100	80.288	ENSGAFG00000012993	tsr1	99	80.385	Gambusia_affinis
ENSTRUG00000004665	tsr1	100	79.207	ENSGACG00000010843	tsr1	100	79.521	Gasterosteus_aculeatus
ENSTRUG00000004665	tsr1	98	56.951	ENSGAGG00000025619	-	99	55.797	Gopherus_agassizii
ENSTRUG00000004665	tsr1	86	37.543	ENSGAGG00000000440	-	98	35.405	Gopherus_agassizii
ENSTRUG00000004665	tsr1	98	56.740	ENSGGOG00000001704	TSR1	98	56.357	Gorilla_gorilla
ENSTRUG00000004665	tsr1	100	82.374	ENSHBUG00000017904	tsr1	100	82.065	Haplochromis_burtoni
ENSTRUG00000004665	tsr1	99	56.901	ENSHGLG00000012806	-	99	56.053	Heterocephalus_glaber_female
ENSTRUG00000004665	tsr1	96	49.938	ENSHGLG00000015688	-	99	49.005	Heterocephalus_glaber_female
ENSTRUG00000004665	tsr1	99	56.901	ENSHGLG00100015392	TSR1	99	56.053	Heterocephalus_glaber_male
ENSTRUG00000004665	tsr1	100	79.444	ENSHCOG00000001432	tsr1	100	79.565	Hippocampus_comes
ENSTRUG00000004665	tsr1	100	73.596	ENSIPUG00000004618	tsr1	100	73.118	Ictalurus_punctatus
ENSTRUG00000004665	tsr1	99	57.664	ENSSTOG00000011819	TSR1	99	57.939	Ictidomys_tridecemlineatus
ENSTRUG00000004665	tsr1	91	53.755	ENSJJAG00000019505	Tsr1	95	52.840	Jaculus_jaculus
ENSTRUG00000004665	tsr1	100	80.476	ENSKMAG00000005763	tsr1	99	81.446	Kryptolebias_marmoratus
ENSTRUG00000004665	tsr1	100	82.515	ENSLBEG00000021823	tsr1	99	82.395	Labrus_bergylta
ENSTRUG00000004665	tsr1	100	58.999	ENSLACG00000002197	TSR1	100	58.423	Latimeria_chalumnae
ENSTRUG00000004665	tsr1	91	73.333	ENSLOCG00000006491	TSR1	99	73.333	Lepisosteus_oculatus
ENSTRUG00000004665	tsr1	80	51.273	ENSLAFG00000022396	-	93	50.177	Loxodonta_africana
ENSTRUG00000004665	tsr1	99	56.780	ENSMFAG00000021330	TSR1	99	56.522	Macaca_fascicularis
ENSTRUG00000004665	tsr1	99	56.659	ENSMMUG00000017519	TSR1	99	56.401	Macaca_mulatta
ENSTRUG00000004665	tsr1	99	56.763	ENSMNEG00000031382	TSR1	99	56.506	Macaca_nemestrina
ENSTRUG00000004665	tsr1	98	56.793	ENSMLEG00000036733	TSR1	99	56.532	Mandrillus_leucophaeus
ENSTRUG00000004665	tsr1	100	82.718	ENSMAMG00000017918	tsr1	99	82.718	Mastacembelus_armatus
ENSTRUG00000004665	tsr1	100	83.053	ENSMZEG00005007477	tsr1	100	83.173	Maylandia_zebra
ENSTRUG00000004665	tsr1	99	57.403	ENSMGAG00000005576	TSR1	99	57.005	Meleagris_gallopavo
ENSTRUG00000004665	tsr1	99	57.039	ENSMICG00000012943	TSR1	99	56.553	Microcebus_murinus
ENSTRUG00000004665	tsr1	99	54.964	ENSMOCG00000022764	Tsr1	99	55.006	Microtus_ochrogaster
ENSTRUG00000004665	tsr1	100	85.248	ENSMMOG00000014280	tsr1	100	84.746	Mola_mola
ENSTRUG00000004665	tsr1	98	57.475	ENSMODG00000010658	TSR1	99	56.899	Monodelphis_domestica
ENSTRUG00000004665	tsr1	100	81.535	ENSMALG00000011681	tsr1	100	82.974	Monopterus_albus
ENSTRUG00000004665	tsr1	99	55.839	MGP_CAROLIEiJ_G0016727	Tsr1	99	54.545	Mus_caroli
ENSTRUG00000004665	tsr1	99	56.204	ENSMUSG00000038335	Tsr1	99	54.909	Mus_musculus
ENSTRUG00000004665	tsr1	99	56.204	MGP_PahariEiJ_G0017864	Tsr1	99	55.152	Mus_pahari
ENSTRUG00000004665	tsr1	99	56.204	MGP_SPRETEiJ_G0017570	Tsr1	99	54.909	Mus_spretus
ENSTRUG00000004665	tsr1	81	59.615	ENSMPUG00000013000	TSR1	100	59.287	Mustela_putorius_furo
ENSTRUG00000004665	tsr1	99	57.506	ENSMLUG00000003505	TSR1	99	56.901	Myotis_lucifugus
ENSTRUG00000004665	tsr1	94	44.688	ENSNGAG00000020455	-	95	44.474	Nannospalax_galili
ENSTRUG00000004665	tsr1	100	82.974	ENSNBRG00000020728	tsr1	99	83.713	Neolamprologus_brichardi
ENSTRUG00000004665	tsr1	98	52.410	ENSNLEG00000017184	TSR1	94	68.935	Nomascus_leucogenys
ENSTRUG00000004665	tsr1	99	53.874	ENSMEUG00000015828	TSR1	99	53.317	Notamacropus_eugenii
ENSTRUG00000004665	tsr1	100	82.713	ENSONIG00000013131	tsr1	100	82.713	Oreochromis_niloticus
ENSTRUG00000004665	tsr1	99	56.848	ENSOCUG00000014256	TSR1	99	56.364	Oryctolagus_cuniculus
ENSTRUG00000004665	tsr1	100	80.529	ENSORLG00000004926	tsr1	99	81.010	Oryzias_latipes
ENSTRUG00000004665	tsr1	100	80.505	ENSORLG00020008792	tsr1	99	80.385	Oryzias_latipes_hni
ENSTRUG00000004665	tsr1	100	80.649	ENSORLG00015013838	tsr1	99	81.130	Oryzias_latipes_hsok
ENSTRUG00000004665	tsr1	100	80.889	ENSOMEG00000004830	tsr1	99	79.952	Oryzias_melastigma
ENSTRUG00000004665	tsr1	99	55.769	ENSOGAG00000004492	TSR1	99	55.649	Otolemur_garnettii
ENSTRUG00000004665	tsr1	99	57.990	ENSOARG00000015437	TSR1	97	57.385	Ovis_aries
ENSTRUG00000004665	tsr1	98	56.863	ENSPPAG00000036355	TSR1	98	56.357	Pan_paniscus
ENSTRUG00000004665	tsr1	99	56.311	ENSPPRG00000015519	-	99	55.985	Panthera_pardus
ENSTRUG00000004665	tsr1	99	56.311	ENSPTIG00000010608	TSR1	99	55.985	Panthera_tigris_altaica
ENSTRUG00000004665	tsr1	98	56.863	ENSPTRG00000008547	TSR1	98	56.357	Pan_troglodytes
ENSTRUG00000004665	tsr1	98	54.590	ENSPANG00000024463	TSR1	99	54.823	Papio_anubis
ENSTRUG00000004665	tsr1	100	71.549	ENSPKIG00000013972	tsr1	100	71.755	Paramormyrops_kingsleyae
ENSTRUG00000004665	tsr1	86	57.343	ENSPSIG00000018258	TSR1	99	57.103	Pelodiscus_sinensis
ENSTRUG00000004665	tsr1	99	80.485	ENSPMGG00000011577	tsr1	99	79.394	Periophthalmus_magnuspinnatus
ENSTRUG00000004665	tsr1	99	55.231	ENSPEMG00000018033	Tsr1	99	54.545	Peromyscus_maniculatus_bairdii
ENSTRUG00000004665	tsr1	99	57.506	ENSPCIG00000009357	TSR1	97	57.091	Phascolarctos_cinereus
ENSTRUG00000004665	tsr1	100	81.062	ENSPFOG00000004483	TSR1	100	80.987	Poecilia_formosa
ENSTRUG00000004665	tsr1	100	80.024	ENSPLAG00000022320	tsr1	99	80.742	Poecilia_latipinna
ENSTRUG00000004665	tsr1	100	80.263	ENSPMEG00000004577	tsr1	99	80.622	Poecilia_mexicana
ENSTRUG00000004665	tsr1	97	80.419	ENSPREG00000010354	tsr1	96	80.320	Poecilia_reticulata
ENSTRUG00000004665	tsr1	98	52.561	ENSPPYG00000007792	TSR1	98	52.190	Pongo_abelii
ENSTRUG00000004665	tsr1	96	50.765	ENSPCAG00000012973	-	70	63.415	Procavia_capensis
ENSTRUG00000004665	tsr1	99	56.501	ENSPCOG00000017928	TSR1	99	56.585	Propithecus_coquereli
ENSTRUG00000004665	tsr1	99	55.407	ENSPVAG00000002162	TSR1	99	55.327	Pteropus_vampyrus
ENSTRUG00000004665	tsr1	100	82.388	ENSPNYG00000016163	tsr1	99	83.394	Pundamilia_nyererei
ENSTRUG00000004665	tsr1	99	73.628	ENSPNAG00000008659	tsr1	99	73.747	Pygocentrus_nattereri
ENSTRUG00000004665	tsr1	99	55.231	ENSRNOG00000002980	Tsr1	99	54.600	Rattus_norvegicus
ENSTRUG00000004665	tsr1	99	56.901	ENSRBIG00000040016	TSR1	99	56.197	Rhinopithecus_bieti
ENSTRUG00000004665	tsr1	99	57.022	ENSRROG00000030361	TSR1	99	56.318	Rhinopithecus_roxellana
ENSTRUG00000004665	tsr1	98	56.933	ENSSBOG00000020785	TSR1	98	56.810	Saimiri_boliviensis_boliviensis
ENSTRUG00000004665	tsr1	99	57.264	ENSSHAG00000011394	TSR1	99	57.022	Sarcophilus_harrisii
ENSTRUG00000004665	tsr1	100	73.640	ENSSFOG00015005455	tsr1	100	73.971	Scleropages_formosus
ENSTRUG00000004665	tsr1	100	82.494	ENSSMAG00000009504	tsr1	100	83.094	Scophthalmus_maximus
ENSTRUG00000004665	tsr1	100	84.910	ENSSDUG00000012074	tsr1	99	84.910	Seriola_dumerili
ENSTRUG00000004665	tsr1	100	85.114	ENSSLDG00000002031	tsr1	99	85.114	Seriola_lalandi_dorsalis
ENSTRUG00000004665	tsr1	92	56.175	ENSSARG00000000759	TSR1	93	56.175	Sorex_araneus
ENSTRUG00000004665	tsr1	99	57.888	ENSSPUG00000007042	TSR1	99	57.678	Sphenodon_punctatus
ENSTRUG00000004665	tsr1	100	84.229	ENSSPAG00000021951	tsr1	100	84.110	Stegastes_partitus
ENSTRUG00000004665	tsr1	99	57.177	ENSSSCG00000038534	TSR1	99	56.574	Sus_scrofa
ENSTRUG00000004665	tsr1	90	60.241	ENSTGUG00000005883	TSR1	100	59.839	Taeniopygia_guttata
ENSTRUG00000004665	tsr1	99	91.209	ENSTNIG00000016196	tsr1	100	91.209	Tetraodon_nigroviridis
ENSTRUG00000004665	tsr1	66	71.538	ENSTBEG00000015275	-	66	71.538	Tupaia_belangeri
ENSTRUG00000004665	tsr1	99	57.959	ENSTTRG00000001177	TSR1	99	57.022	Tursiops_truncatus
ENSTRUG00000004665	tsr1	99	55.704	ENSUAMG00000025160	TSR1	99	55.366	Ursus_americanus
ENSTRUG00000004665	tsr1	96	55.458	ENSUMAG00000009294	TSR1	98	55.290	Ursus_maritimus
ENSTRUG00000004665	tsr1	94	50.779	ENSVPAG00000000228	TSR1	99	49.787	Vicugna_pacos
ENSTRUG00000004665	tsr1	99	56.053	ENSVVUG00000021767	TSR1	99	55.893	Vulpes_vulpes
ENSTRUG00000004665	tsr1	99	53.237	ENSXETG00000023797	tsr1	100	52.941	Xenopus_tropicalis
ENSTRUG00000004665	tsr1	100	82.203	ENSXCOG00000009635	tsr1	100	81.840	Xiphophorus_couchianus
ENSTRUG00000004665	tsr1	100	81.709	ENSXMAG00000001397	tsr1	97	80.866	Xiphophorus_maculatus