EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSTRUG00000004740 (Gene tree)
Gene ID: 101078995
Gene Symbol: polr2d
Alias: rnap|wu:fa95b11|zgc:110435
Full Name: RNA polymerase II subunit D
Gene Type: protein_coding
Species: Takifugu_rubripes
Status: putative
Strand: Plus strand
Length: 2172 bases
Position: chr11:11196917-11199088
Accession: 101078995
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTRUP00000011282	RNA_pol_Rpb4	PF03874.16	1.7e-26	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTRUT00000011342	-	1109	XM_003968784	ENSTRUP00000011282	142 (aa)	XP_003968833	H2SFV1

Gene Model

Click here to download ENSTRUG00000004740's gene model file

Pathways

Pathway ID	Pathway Name	Source
tru03020	RNA polymerase	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSTRUG00000004740's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTRUG00000004740	polr2d	100	90.845	ENSG00000144231	POLR2D	100	95.192	Homo_sapiens
ENSTRUG00000004740	polr2d	100	94.444	ENSAPOG00000023553	polr2d	100	94.444	Acanthochromis_polyacanthus
ENSTRUG00000004740	polr2d	100	89.583	ENSAMEG00000011746	POLR2D	100	89.583	Ailuropoda_melanoleuca
ENSTRUG00000004740	polr2d	100	94.444	ENSAOCG00000007295	polr2d	100	94.444	Amphiprion_ocellaris
ENSTRUG00000004740	polr2d	100	94.444	ENSAPEG00000018714	polr2d	100	94.444	Amphiprion_percula
ENSTRUG00000004740	polr2d	100	95.139	ENSATEG00000020416	polr2d	100	95.139	Anabas_testudineus
ENSTRUG00000004740	polr2d	100	91.549	ENSACAG00000005255	POLR2D	100	91.549	Anolis_carolinensis
ENSTRUG00000004740	polr2d	100	90.845	ENSANAG00000019959	POLR2D	100	90.845	Aotus_nancymaae
ENSTRUG00000004740	polr2d	100	94.444	ENSACLG00000009919	polr2d	100	72.222	Astatotilapia_calliptera
ENSTRUG00000004740	polr2d	94	97.744	ENSAMXG00000008954	polr2d	99	92.908	Astyanax_mexicanus
ENSTRUG00000004740	polr2d	100	90.845	ENSBTAG00000053244	POLR2D	100	90.845	Bos_taurus
ENSTRUG00000004740	polr2d	99	58.333	WBGene00018391	rpb-4	100	58.333	Caenorhabditis_elegans
ENSTRUG00000004740	polr2d	100	90.845	ENSCJAG00000042216	-	100	90.845	Callithrix_jacchus
ENSTRUG00000004740	polr2d	100	90.141	ENSCJAG00000021814	-	100	90.141	Callithrix_jacchus
ENSTRUG00000004740	polr2d	100	90.845	ENSCAFG00000004311	POLR2D	100	90.845	Canis_familiaris
ENSTRUG00000004740	polr2d	100	90.845	ENSCAFG00020003617	POLR2D	100	90.845	Canis_lupus_dingo
ENSTRUG00000004740	polr2d	100	90.845	ENSCHIG00000025995	POLR2D	100	90.845	Capra_hircus
ENSTRUG00000004740	polr2d	82	94.017	ENSTSYG00000036021	POLR2D	100	94.017	Carlito_syrichta
ENSTRUG00000004740	polr2d	100	90.845	ENSCPOG00000002571	POLR2D	100	90.845	Cavia_porcellus
ENSTRUG00000004740	polr2d	100	90.845	ENSCCAG00000037709	POLR2D	100	90.845	Cebus_capucinus
ENSTRUG00000004740	polr2d	100	91.549	ENSCATG00000036749	POLR2D	100	91.549	Cercocebus_atys
ENSTRUG00000004740	polr2d	100	90.141	ENSCLAG00000004449	POLR2D	100	90.141	Chinchilla_lanigera
ENSTRUG00000004740	polr2d	100	91.549	ENSCSAG00000016861	POLR2D	100	91.549	Chlorocebus_sabaeus
ENSTRUG00000004740	polr2d	82	94.872	ENSCHOG00000013850	POLR2D	100	94.872	Choloepus_hoffmanni
ENSTRUG00000004740	polr2d	100	91.549	ENSCPBG00000019132	POLR2D	51	91.549	Chrysemys_picta_bellii
ENSTRUG00000004740	polr2d	90	85.938	ENSCING00000011474	-	96	85.938	Ciona_intestinalis
ENSTRUG00000004740	polr2d	95	82.963	ENSCSAVG00000008353	-	93	82.963	Ciona_savignyi
ENSTRUG00000004740	polr2d	100	90.845	ENSCANG00000043665	POLR2D	100	90.845	Colobus_angolensis_palliatus
ENSTRUG00000004740	polr2d	100	90.845	ENSCGRG00001013608	Polr2d	100	90.845	Cricetulus_griseus_chok1gshd
ENSTRUG00000004740	polr2d	82	94.872	ENSCGRG00000012624	Polr2d	100	94.872	Cricetulus_griseus_crigri
ENSTRUG00000004740	polr2d	100	93.056	ENSCSEG00000006147	polr2d	100	93.056	Cynoglossus_semilaevis
ENSTRUG00000004740	polr2d	100	93.750	ENSCVAG00000000779	polr2d	100	93.750	Cyprinodon_variegatus
ENSTRUG00000004740	polr2d	100	95.070	ENSDARG00000076509	polr2d	100	95.070	Danio_rerio
ENSTRUG00000004740	polr2d	100	91.549	ENSDNOG00000008527	POLR2D	100	91.549	Dasypus_novemcinctus
ENSTRUG00000004740	polr2d	100	90.845	ENSDORG00000026897	Polr2d	100	90.845	Dipodomys_ordii
ENSTRUG00000004740	polr2d	94	77.612	FBgn0263757	Rpb4	96	77.612	Drosophila_melanogaster
ENSTRUG00000004740	polr2d	100	90.141	ENSEBUG00000007675	polr2d	100	90.141	Eptatretus_burgeri
ENSTRUG00000004740	polr2d	100	90.845	ENSEASG00005007103	POLR2D	100	90.845	Equus_asinus_asinus
ENSTRUG00000004740	polr2d	100	90.845	ENSECAG00000000556	POLR2D	100	90.845	Equus_caballus
ENSTRUG00000004740	polr2d	100	94.406	ENSELUG00000005928	polr2d	100	94.406	Esox_lucius
ENSTRUG00000004740	polr2d	100	90.845	ENSFCAG00000027816	POLR2D	100	90.845	Felis_catus
ENSTRUG00000004740	polr2d	100	90.845	ENSFALG00000003528	POLR2D	100	90.845	Ficedula_albicollis
ENSTRUG00000004740	polr2d	100	89.437	ENSFDAG00000007217	POLR2D	100	89.437	Fukomys_damarensis
ENSTRUG00000004740	polr2d	100	93.007	ENSGMOG00000001823	polr2d	99	93.007	Gadus_morhua
ENSTRUG00000004740	polr2d	100	90.845	ENSGALG00000002057	POLR2D	100	90.845	Gallus_gallus
ENSTRUG00000004740	polr2d	100	94.444	ENSGAFG00000016932	polr2d	71	94.444	Gambusia_affinis
ENSTRUG00000004740	polr2d	100	92.361	ENSGACG00000004639	polr2d	100	92.361	Gasterosteus_aculeatus
ENSTRUG00000004740	polr2d	100	92.254	ENSGAGG00000021308	POLR2D	100	92.254	Gopherus_agassizii
ENSTRUG00000004740	polr2d	100	90.845	ENSGGOG00000004723	POLR2D	100	90.845	Gorilla_gorilla
ENSTRUG00000004740	polr2d	100	90.141	ENSHGLG00000016570	Polr2d	100	90.141	Heterocephalus_glaber_female
ENSTRUG00000004740	polr2d	100	90.141	ENSHGLG00100013785	Polr2d	100	90.141	Heterocephalus_glaber_male
ENSTRUG00000004740	polr2d	100	91.549	ENSHCOG00000006425	polr2d	100	91.549	Hippocampus_comes
ENSTRUG00000004740	polr2d	100	94.366	ENSIPUG00000011192	polr2d	100	94.366	Ictalurus_punctatus
ENSTRUG00000004740	polr2d	100	88.732	ENSSTOG00000023329	POLR2D	100	88.732	Ictidomys_tridecemlineatus
ENSTRUG00000004740	polr2d	100	90.845	ENSJJAG00000015053	-	100	90.845	Jaculus_jaculus
ENSTRUG00000004740	polr2d	82	88.889	ENSJJAG00000005723	-	94	88.889	Jaculus_jaculus
ENSTRUG00000004740	polr2d	100	83.803	ENSJJAG00000000783	-	100	83.803	Jaculus_jaculus
ENSTRUG00000004740	polr2d	94	82.877	ENSKMAG00000010677	polr2d	82	82.877	Kryptolebias_marmoratus
ENSTRUG00000004740	polr2d	100	93.662	ENSLACG00000017253	POLR2D	100	93.662	Latimeria_chalumnae
ENSTRUG00000004740	polr2d	100	95.139	ENSLOCG00000009106	polr2d	100	95.139	Lepisosteus_oculatus
ENSTRUG00000004740	polr2d	100	90.845	ENSLAFG00000001848	POLR2D	100	90.845	Loxodonta_africana
ENSTRUG00000004740	polr2d	100	91.549	ENSMFAG00000031937	POLR2D	100	91.549	Macaca_fascicularis
ENSTRUG00000004740	polr2d	100	91.549	ENSMMUG00000001989	POLR2D	100	91.549	Macaca_mulatta
ENSTRUG00000004740	polr2d	100	91.549	ENSMNEG00000035505	POLR2D	100	91.549	Macaca_nemestrina
ENSTRUG00000004740	polr2d	100	91.549	ENSMLEG00000035827	POLR2D	100	91.549	Mandrillus_leucophaeus
ENSTRUG00000004740	polr2d	100	90.845	ENSMGAG00000001248	POLR2D	100	90.845	Meleagris_gallopavo
ENSTRUG00000004740	polr2d	100	90.141	ENSMAUG00000014518	Polr2d	100	90.141	Mesocricetus_auratus
ENSTRUG00000004740	polr2d	100	90.141	ENSMICG00000009931	POLR2D	100	90.141	Microcebus_murinus
ENSTRUG00000004740	polr2d	100	88.028	ENSMOCG00000019367	Polr2d	100	88.028	Microtus_ochrogaster
ENSTRUG00000004740	polr2d	100	76.761	ENSMODG00000025027	-	100	76.761	Monodelphis_domestica
ENSTRUG00000004740	polr2d	100	76.761	ENSMODG00000025026	-	100	76.761	Monodelphis_domestica
ENSTRUG00000004740	polr2d	100	76.761	ENSMODG00000025028	-	100	76.761	Monodelphis_domestica
ENSTRUG00000004740	polr2d	100	75.352	ENSMODG00000025032	-	100	75.352	Monodelphis_domestica
ENSTRUG00000004740	polr2d	100	76.056	ENSMODG00000025029	-	100	76.056	Monodelphis_domestica
ENSTRUG00000004740	polr2d	100	76.761	ENSMODG00000025030	-	100	76.761	Monodelphis_domestica
ENSTRUG00000004740	polr2d	100	76.761	ENSMODG00000025031	-	100	76.761	Monodelphis_domestica
ENSTRUG00000004740	polr2d	100	76.761	ENSMODG00000025036	-	100	76.761	Monodelphis_domestica
ENSTRUG00000004740	polr2d	100	76.056	ENSMODG00000025034	-	100	76.056	Monodelphis_domestica
ENSTRUG00000004740	polr2d	100	76.056	ENSMODG00000025035	-	100	76.056	Monodelphis_domestica
ENSTRUG00000004740	polr2d	100	91.549	ENSMODG00000018653	-	100	91.549	Monodelphis_domestica
ENSTRUG00000004740	polr2d	100	76.761	ENSMODG00000025033	-	100	76.761	Monodelphis_domestica
ENSTRUG00000004740	polr2d	100	94.444	ENSMALG00000018266	polr2d	100	94.444	Monopterus_albus
ENSTRUG00000004740	polr2d	100	90.845	MGP_CAROLIEiJ_G0022066	Polr2d	100	90.845	Mus_caroli
ENSTRUG00000004740	polr2d	100	90.845	ENSMUSG00000024258	Polr2d	100	90.845	Mus_musculus
ENSTRUG00000004740	polr2d	100	90.845	MGP_PahariEiJ_G0018800	Polr2d	100	90.845	Mus_pahari
ENSTRUG00000004740	polr2d	100	90.845	MGP_SPRETEiJ_G0022977	Polr2d	100	90.845	Mus_spretus
ENSTRUG00000004740	polr2d	100	90.845	ENSMPUG00000016685	POLR2D	100	90.845	Mustela_putorius_furo
ENSTRUG00000004740	polr2d	83	94.915	ENSMLUG00000006862	POLR2D	100	94.915	Myotis_lucifugus
ENSTRUG00000004740	polr2d	100	90.845	ENSNGAG00000014862	Polr2d	100	90.845	Nannospalax_galili
ENSTRUG00000004740	polr2d	100	90.845	ENSNLEG00000027191	POLR2D	100	90.845	Nomascus_leucogenys
ENSTRUG00000004740	polr2d	82	94.017	ENSOPRG00000005327	POLR2D	100	94.017	Ochotona_princeps
ENSTRUG00000004740	polr2d	100	90.141	ENSODEG00000005262	POLR2D	100	90.141	Octodon_degus
ENSTRUG00000004740	polr2d	100	95.139	ENSONIG00000017290	polr2d	100	95.139	Oreochromis_niloticus
ENSTRUG00000004740	polr2d	83	95.763	ENSOANG00000013216	POLR2D	100	95.763	Ornithorhynchus_anatinus
ENSTRUG00000004740	polr2d	100	84.615	ENSOCUG00000021449	-	100	84.615	Oryctolagus_cuniculus
ENSTRUG00000004740	polr2d	100	88.732	ENSOCUG00000023403	-	100	88.732	Oryctolagus_cuniculus
ENSTRUG00000004740	polr2d	100	92.361	ENSORLG00000005266	polr2d	100	92.361	Oryzias_latipes
ENSTRUG00000004740	polr2d	100	92.361	ENSORLG00020006647	polr2d	100	92.361	Oryzias_latipes_hni
ENSTRUG00000004740	polr2d	100	92.361	ENSORLG00015003222	polr2d	100	92.361	Oryzias_latipes_hsok
ENSTRUG00000004740	polr2d	99	92.908	ENSOMEG00000018915	polr2d	98	92.908	Oryzias_melastigma
ENSTRUG00000004740	polr2d	100	88.889	ENSOGAG00000017118	POLR2D	100	88.889	Otolemur_garnettii
ENSTRUG00000004740	polr2d	100	90.845	ENSOARG00000015995	POLR2D	100	90.845	Ovis_aries
ENSTRUG00000004740	polr2d	100	90.845	ENSPPRG00000020222	POLR2D	100	90.845	Panthera_pardus
ENSTRUG00000004740	polr2d	100	90.845	ENSPTIG00000018618	POLR2D	100	90.845	Panthera_tigris_altaica
ENSTRUG00000004740	polr2d	100	90.845	ENSPTRG00000012436	POLR2D	100	90.845	Pan_troglodytes
ENSTRUG00000004740	polr2d	100	91.549	ENSPANG00000018602	POLR2D	100	91.549	Papio_anubis
ENSTRUG00000004740	polr2d	100	93.750	ENSPKIG00000012166	polr2d	100	93.750	Paramormyrops_kingsleyae
ENSTRUG00000004740	polr2d	83	95.763	ENSPSIG00000002873	POLR2D	100	95.763	Pelodiscus_sinensis
ENSTRUG00000004740	polr2d	100	90.845	ENSPEMG00000018244	Polr2d	100	90.845	Peromyscus_maniculatus_bairdii
ENSTRUG00000004740	polr2d	100	88.028	ENSPMAG00000005021	polr2d	99	88.028	Petromyzon_marinus
ENSTRUG00000004740	polr2d	100	94.444	ENSPFOG00000008969	polr2d	100	94.444	Poecilia_formosa
ENSTRUG00000004740	polr2d	100	94.444	ENSPLAG00000017210	polr2d	100	94.444	Poecilia_latipinna
ENSTRUG00000004740	polr2d	100	94.444	ENSPMEG00000005160	polr2d	100	94.444	Poecilia_mexicana
ENSTRUG00000004740	polr2d	73	98.077	ENSPREG00000021862	polr2d	100	98.077	Poecilia_reticulata
ENSTRUG00000004740	polr2d	100	90.845	ENSPPYG00000012759	POLR2D	100	90.845	Pongo_abelii
ENSTRUG00000004740	polr2d	100	90.845	ENSPCAG00000001396	POLR2D	100	90.845	Procavia_capensis
ENSTRUG00000004740	polr2d	100	90.141	ENSPCOG00000022076	POLR2D	100	90.141	Propithecus_coquereli
ENSTRUG00000004740	polr2d	100	90.845	ENSPVAG00000004002	POLR2D	100	90.845	Pteropus_vampyrus
ENSTRUG00000004740	polr2d	99	94.366	ENSPNAG00000018246	polr2d	99	94.366	Pygocentrus_nattereri
ENSTRUG00000004740	polr2d	100	90.845	ENSRNOG00000016231	Polr2d	100	90.845	Rattus_norvegicus
ENSTRUG00000004740	polr2d	100	90.845	ENSRBIG00000039326	POLR2D	100	90.845	Rhinopithecus_bieti
ENSTRUG00000004740	polr2d	100	90.845	ENSRROG00000023289	POLR2D	100	90.845	Rhinopithecus_roxellana
ENSTRUG00000004740	polr2d	99	92.199	ENSSHAG00000014817	-	99	92.199	Sarcophilus_harrisii
ENSTRUG00000004740	polr2d	92	98.473	ENSSFOG00015024204	polr2d	100	94.444	Scleropages_formosus
ENSTRUG00000004740	polr2d	100	94.444	ENSSDUG00000006060	polr2d	100	94.444	Seriola_dumerili
ENSTRUG00000004740	polr2d	94	97.744	ENSSLDG00000024485	polr2d	99	93.706	Seriola_lalandi_dorsalis
ENSTRUG00000004740	polr2d	82	94.017	ENSSARG00000009037	POLR2D	100	94.017	Sorex_araneus
ENSTRUG00000004740	polr2d	100	90.845	ENSSPUG00000014915	POLR2D	100	90.845	Sphenodon_punctatus
ENSTRUG00000004740	polr2d	100	95.139	ENSSPAG00000013386	polr2d	100	95.139	Stegastes_partitus
ENSTRUG00000004740	polr2d	100	90.845	ENSSSCG00000039230	POLR2D	100	90.845	Sus_scrofa
ENSTRUG00000004740	polr2d	100	90.845	ENSTGUG00000005773	POLR2D	99	90.845	Taeniopygia_guttata
ENSTRUG00000004740	polr2d	100	97.887	ENSTNIG00000011210	polr2d	100	97.887	Tetraodon_nigroviridis
ENSTRUG00000004740	polr2d	82	94.872	ENSTBEG00000006081	POLR2D	100	94.872	Tupaia_belangeri
ENSTRUG00000004740	polr2d	82	94.872	ENSTTRG00000010055	POLR2D	100	94.872	Tursiops_truncatus
ENSTRUG00000004740	polr2d	92	93.846	ENSUAMG00000024374	POLR2D	98	93.846	Ursus_americanus
ENSTRUG00000004740	polr2d	85	94.167	ENSUMAG00000008280	POLR2D	100	95.192	Ursus_maritimus
ENSTRUG00000004740	polr2d	82	94.872	ENSVPAG00000007239	POLR2D	100	94.872	Vicugna_pacos
ENSTRUG00000004740	polr2d	100	90.845	ENSVVUG00000008616	POLR2D	100	90.845	Vulpes_vulpes
ENSTRUG00000004740	polr2d	100	88.732	ENSXETG00000002955	polr2d	100	88.732	Xenopus_tropicalis
ENSTRUG00000004740	polr2d	73	98.077	ENSXCOG00000012668	polr2d	100	98.077	Xiphophorus_couchianus
ENSTRUG00000004740	polr2d	73	98.077	ENSXMAG00000014031	polr2d	100	98.077	Xiphophorus_maculatus