EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTRUG00000004744 (Gene tree)
Gene ID: 101078424
Gene Symbol: gfi1aa
Alias: gfi1.1|gfi1a|zgc:113277
Full Name: growth factor independent 1 transcriptional repressor
Gene Type: protein_coding
Species: Takifugu_rubripes
Status: putative
Strand: Plus strand
Length: 2071 bases
Position: chr22:9109376-9111446
Accession: 101078424
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTRUP00000010746	zf-C2H2	PF00096.26	3.4e-25	1	6
ENSTRUP00000010746	zf-C2H2	PF00096.26	3.4e-25	2	6
ENSTRUP00000010746	zf-C2H2	PF00096.26	3.4e-25	3	6
ENSTRUP00000010746	zf-C2H2	PF00096.26	3.4e-25	4	6
ENSTRUP00000010746	zf-C2H2	PF00096.26	3.4e-25	5	6
ENSTRUP00000010746	zf-C2H2	PF00096.26	3.4e-25	6	6
ENSTRUP00000011298	zf-C2H2	PF00096.26	1.2e-24	1	6
ENSTRUP00000011298	zf-C2H2	PF00096.26	1.2e-24	2	6
ENSTRUP00000011298	zf-C2H2	PF00096.26	1.2e-24	3	6
ENSTRUP00000011298	zf-C2H2	PF00096.26	1.2e-24	4	6
ENSTRUP00000011298	zf-C2H2	PF00096.26	1.2e-24	5	6
ENSTRUP00000011298	zf-C2H2	PF00096.26	1.2e-24	6	6
ENSTRUP00000010746	zf-met	PF12874.7	4.1e-06	1	1
ENSTRUP00000011298	zf-met	PF12874.7	7e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTRUT00000010804	-	1557	-	ENSTRUP00000010746	370 (aa)	-	H2SEB5
ENSTRUT00000011358	-	1462	XM_003975725	ENSTRUP00000011298	401 (aa)	XP_003975774	H2SFW7

Gene Model

Click here to download ENSTRUG00000004744's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTRUG00000004744's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTRUG00000004744	gfi1aa	59	41.176	ENSTRUG00000015687	-	92	42.262
ENSTRUG00000004744	gfi1aa	50	41.317	ENSTRUG00000013850	prdm5	72	41.317
ENSTRUG00000004744	gfi1aa	54	40.000	ENSTRUG00000022666	-	53	40.000
ENSTRUG00000004744	gfi1aa	100	50.493	ENSTRUG00000004525	gfi1b	100	49.754
ENSTRUG00000004744	gfi1aa	55	46.154	ENSTRUG00000013906	-	93	46.154
ENSTRUG00000004744	gfi1aa	58	46.789	ENSTRUG00000007022	-	82	46.789
ENSTRUG00000004744	gfi1aa	52	42.647	ENSTRUG00000012157	-	87	42.647
ENSTRUG00000004744	gfi1aa	100	60.891	ENSTRUG00000000415	gfi1ab	100	60.794
ENSTRUG00000004744	gfi1aa	50	39.053	ENSTRUG00000025881	-	61	39.053
ENSTRUG00000004744	gfi1aa	66	42.012	ENSTRUG00000003277	zbtb17	91	42.029
ENSTRUG00000004744	gfi1aa	54	42.857	ENSTRUG00000017456	znf236	62	43.210
ENSTRUG00000004744	gfi1aa	54	40.351	ENSTRUG00000022076	-	80	42.857
ENSTRUG00000004744	gfi1aa	57	44.643	ENSTRUG00000001268	-	93	44.643
ENSTRUG00000004744	gfi1aa	51	38.053	ENSTRUG00000025597	znf646	60	38.053
ENSTRUG00000004744	gfi1aa	51	39.326	ENSTRUG00000020582	-	85	43.478
ENSTRUG00000004744	gfi1aa	56	44.048	ENSTRUG00000006896	-	92	44.048
ENSTRUG00000004744	gfi1aa	50	40.000	ENSTRUG00000006180	si:ch211-216l23.1	72	39.623
ENSTRUG00000004744	gfi1aa	56	44.048	ENSTRUG00000019483	-	93	43.624
ENSTRUG00000004744	gfi1aa	64	34.862	ENSTRUG00000022194	-	53	34.862
ENSTRUG00000004744	gfi1aa	51	35.754	ENSTRUG00000009203	zbtb41	50	35.754

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTRUG00000004744	gfi1aa	100	82.793	ENSAPOG00000005043	gfi1aa	100	82.793	Acanthochromis_polyacanthus
ENSTRUG00000004744	gfi1aa	100	77.307	ENSACIG00000021378	gfi1aa	100	77.307	Amphilophus_citrinellus
ENSTRUG00000004744	gfi1aa	100	82.045	ENSAOCG00000022957	gfi1aa	100	82.045	Amphiprion_ocellaris
ENSTRUG00000004744	gfi1aa	100	82.294	ENSAPEG00000014539	gfi1aa	100	82.294	Amphiprion_percula
ENSTRUG00000004744	gfi1aa	100	77.556	ENSATEG00000019026	gfi1aa	100	81.560	Anabas_testudineus
ENSTRUG00000004744	gfi1aa	100	78.055	ENSACLG00000008641	gfi1aa	100	78.055	Astatotilapia_calliptera
ENSTRUG00000004744	gfi1aa	100	63.861	ENSDARG00000020746	gfi1aa	100	63.861	Danio_rerio
ENSTRUG00000004744	gfi1aa	100	76.808	ENSHBUG00000007389	gfi1aa	100	76.808	Haplochromis_burtoni
ENSTRUG00000004744	gfi1aa	100	75.810	ENSKMAG00000002148	gfi1aa	100	76.060	Kryptolebias_marmoratus
ENSTRUG00000004744	gfi1aa	100	76.923	ENSLBEG00000006603	gfi1aa	100	76.923	Labrus_bergylta
ENSTRUG00000004744	gfi1aa	100	75.561	ENSMAMG00000004896	gfi1aa	100	75.810	Mastacembelus_armatus
ENSTRUG00000004744	gfi1aa	100	78.055	ENSMZEG00005004578	gfi1aa	100	78.055	Maylandia_zebra
ENSTRUG00000004744	gfi1aa	100	65.337	ENSMMOG00000006167	gfi1aa	100	79.592	Mola_mola
ENSTRUG00000004744	gfi1aa	100	77.805	ENSNBRG00000002673	gfi1aa	100	77.805	Neolamprologus_brichardi
ENSTRUG00000004744	gfi1aa	100	76.808	ENSPNYG00000002189	gfi1aa	100	76.808	Pundamilia_nyererei
ENSTRUG00000004744	gfi1aa	100	76.716	ENSSMAG00000006797	gfi1aa	100	77.206	Scophthalmus_maximus
ENSTRUG00000004744	gfi1aa	100	80.397	ENSSDUG00000011654	gfi1aa	100	80.397	Seriola_dumerili
ENSTRUG00000004744	gfi1aa	100	79.208	ENSSLDG00000016512	gfi1aa	100	79.208	Seriola_lalandi_dorsalis
ENSTRUG00000004744	gfi1aa	86	79.883	ENSSPAG00000000927	gfi1aa	94	79.883	Stegastes_partitus