EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSTRUG00000004885 (Gene tree)
Gene ID
101069734
Gene Symbol
smarca4a
Alias
brahma-related gene 1|brg1|smarca2|smarca4|wu:fb51a08|yng|young
Full Name
transcription activator BRG1-like
Gene Type
protein_coding
Species
Takifugu_rubripes
Status
putative
Strand
Plus strand
Length
10838 bases
Position
chr5:1688252-1699089
Accession
101069734
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSTRUP00000011660ResIIIPF04851.156.9e-0911
ENSTRUP00000011660BRKPF07533.161.3e-1611
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSTRUT00000011720-4206XM_011603621ENSTRUP000000116601401 (aa)XP_011601923H2SGX8
Gene Model
Click here to download ENSTRUG00000004885's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSTRUG00000004885's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSTRUG00000004885smarca4a10071.389ENSTRUG00000015619SMARCA28770.730
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSTRUG00000004885smarca4a10081.267ENSG00000127616SMARCA49995.652Homo_sapiens
ENSTRUG00000004885smarca4a9982.630ENSAPOG00000004542SMARCA49982.584Acanthochromis_polyacanthus
ENSTRUG00000004885smarca4a7688.838ENSAPOG00000003509smarca4a8685.843Acanthochromis_polyacanthus
ENSTRUG00000004885smarca4a10077.480ENSAMEG00000010868SMARCA49077.531Ailuropoda_melanoleuca
ENSTRUG00000004885smarca4a10088.462ENSACIG00000021550smarca4a8988.393Amphilophus_citrinellus
ENSTRUG00000004885smarca4a10082.468ENSACIG00000003035-9182.060Amphilophus_citrinellus
ENSTRUG00000004885smarca4a10080.709ENSAOCG00000009450-9380.764Amphiprion_ocellaris
ENSTRUG00000004885smarca4a10090.967ENSAOCG00000019167smarca4a10090.185Amphiprion_ocellaris
ENSTRUG00000004885smarca4a10080.969ENSAPEG00000023108-8880.942Amphiprion_percula
ENSTRUG00000004885smarca4a10090.838ENSAPEG00000015559smarca4a10090.057Amphiprion_percula
ENSTRUG00000004885smarca4a10087.748ENSATEG00000011524smarca4a9087.278Anabas_testudineus
ENSTRUG00000004885smarca4a10082.661ENSATEG00000001094-9780.098Anabas_testudineus
ENSTRUG00000004885smarca4a9981.144ENSANAG00000036991SMARCA49077.546Aotus_nancymaae
ENSTRUG00000004885smarca4a10082.621ENSACLG00000008638-9281.965Astatotilapia_calliptera
ENSTRUG00000004885smarca4a10087.688ENSACLG00000000163smarca4a9187.893Astatotilapia_calliptera
ENSTRUG00000004885smarca4a10083.837ENSAMXG00000021023smarca4a9083.345Astyanax_mexicanus
ENSTRUG00000004885smarca4a9983.100ENSAMXG00000011238-9782.865Astyanax_mexicanus
ENSTRUG00000004885smarca4a10082.079ENSBTAG00000019220SMARCA48981.656Bos_taurus
ENSTRUG00000004885smarca4a10077.104ENSCJAG00000005936SMARCA49077.546Callithrix_jacchus
ENSTRUG00000004885smarca4a10081.403ENSCAFG00000017584SMARCA48981.527Canis_familiaris
ENSTRUG00000004885smarca4a10082.266ENSCAFG00020024620SMARCA48982.042Canis_lupus_dingo
ENSTRUG00000004885smarca4a9977.717ENSCHIG00000015318SMARCA48977.717Capra_hircus
ENSTRUG00000004885smarca4a10082.055ENSTSYG00000012966SMARCA48981.768Carlito_syrichta
ENSTRUG00000004885smarca4a9980.242ENSCAPG00000015932SMARCA49479.364Cavia_aperea
ENSTRUG00000004885smarca4a10081.199ENSCPOG00000015549SMARCA48981.595Cavia_porcellus
ENSTRUG00000004885smarca4a10079.346ENSCCAG00000031660SMARCA48879.263Cebus_capucinus
ENSTRUG00000004885smarca4a10081.267ENSCATG00000029530SMARCA48981.595Cercocebus_atys
ENSTRUG00000004885smarca4a10082.118ENSCLAG00000011946SMARCA48982.037Chinchilla_lanigera
ENSTRUG00000004885smarca4a9981.391ENSCPBG00000009994SMARCA48981.527Chrysemys_picta_bellii
ENSTRUG00000004885smarca4a10081.267ENSCANG00000036013SMARCA48981.595Colobus_angolensis_palliatus
ENSTRUG00000004885smarca4a10081.199ENSCGRG00001016732Smarca48981.254Cricetulus_griseus_chok1gshd
ENSTRUG00000004885smarca4a10081.199ENSCGRG00000017242Smarca49181.254Cricetulus_griseus_crigri
ENSTRUG00000004885smarca4a9686.396ENSCSEG00000014771smarca4a9087.004Cynoglossus_semilaevis
ENSTRUG00000004885smarca4a10085.441ENSCVAG00000006979smarca4a9085.988Cyprinodon_variegatus
ENSTRUG00000004885smarca4a10081.229ENSCVAG00000003018-9181.148Cyprinodon_variegatus
ENSTRUG00000004885smarca4a10083.776ENSDARG00000077226smarca4a9084.200Danio_rerio
ENSTRUG00000004885smarca4a9679.929ENSDARG00000104339SMARCA48979.621Danio_rerio
ENSTRUG00000004885smarca4a9980.486ENSDNOG00000048847SMARCA48186.347Dasypus_novemcinctus
ENSTRUG00000004885smarca4a9576.662ENSDORG00000002544Smarca49176.573Dipodomys_ordii
ENSTRUG00000004885smarca4a9970.435ENSETEG00000013361SMARCA48969.431Echinops_telfairi
ENSTRUG00000004885smarca4a9982.055ENSEASG00005006167SMARCA48981.773Equus_asinus_asinus
ENSTRUG00000004885smarca4a10081.063ENSECAG00000008334SMARCA49081.254Equus_caballus
ENSTRUG00000004885smarca4a10084.840ENSELUG00000010247smarca4a8985.084Esox_lucius
ENSTRUG00000004885smarca4a10077.610ENSELUG00000023232-8781.951Esox_lucius
ENSTRUG00000004885smarca4a10081.237ENSFCAG00000004894SMARCA48981.293Felis_catus
ENSTRUG00000004885smarca4a9679.185ENSFALG00000004208SMARCA48778.295Ficedula_albicollis
ENSTRUG00000004885smarca4a9980.982ENSFDAG00000012237SMARCA49581.459Fukomys_damarensis
ENSTRUG00000004885smarca4a10079.563ENSFHEG00000007902-9080.053Fundulus_heteroclitus
ENSTRUG00000004885smarca4a9686.052ENSFHEG00000010182smarca4a9686.837Fundulus_heteroclitus
ENSTRUG00000004885smarca4a8580.059ENSGMOG00000005756-7978.677Gadus_morhua
ENSTRUG00000004885smarca4a7882.581ENSGMOG00000002649smarca4a7883.030Gadus_morhua
ENSTRUG00000004885smarca4a8280.249ENSGALG00000047145SMARCA410079.668Gallus_gallus
ENSTRUG00000004885smarca4a8986.824ENSGAFG00000014900smarca4a8589.862Gambusia_affinis
ENSTRUG00000004885smarca4a10080.939ENSGAFG00000008827-8879.972Gambusia_affinis
ENSTRUG00000004885smarca4a9977.198ENSGACG00000016033-9176.587Gasterosteus_aculeatus
ENSTRUG00000004885smarca4a9785.734ENSGACG00000006691smarca4a9085.899Gasterosteus_aculeatus
ENSTRUG00000004885smarca4a10081.570ENSGAGG00000016757SMARCA48981.762Gopherus_agassizii
ENSTRUG00000004885smarca4a10081.267ENSGGOG00000009882SMARCA48981.595Gorilla_gorilla
ENSTRUG00000004885smarca4a10083.181ENSHBUG00000005447-9282.386Haplochromis_burtoni
ENSTRUG00000004885smarca4a10087.817ENSHBUG00000021172smarca4a9088.090Haplochromis_burtoni
ENSTRUG00000004885smarca4a10080.610ENSHGLG00000010519SMARCA48980.868Heterocephalus_glaber_female
ENSTRUG00000004885smarca4a10081.109ENSHGLG00100013774SMARCA48981.370Heterocephalus_glaber_male
ENSTRUG00000004885smarca4a10087.073ENSHCOG00000009510smarca4a9186.867Hippocampus_comes
ENSTRUG00000004885smarca4a9780.999ENSIPUG00000016346-8780.748Ictalurus_punctatus
ENSTRUG00000004885smarca4a10085.319ENSIPUG00000006107smarca4a9184.954Ictalurus_punctatus
ENSTRUG00000004885smarca4a10081.267ENSSTOG00000007939SMARCA48981.459Ictidomys_tridecemlineatus
ENSTRUG00000004885smarca4a10079.347ENSJJAG00000012877Smarca48979.000Jaculus_jaculus
ENSTRUG00000004885smarca4a9680.636ENSKMAG00000019518-9280.874Kryptolebias_marmoratus
ENSTRUG00000004885smarca4a10085.587ENSKMAG00000011931smarca4a8985.851Kryptolebias_marmoratus
ENSTRUG00000004885smarca4a10086.345ENSLBEG00000017383smarca4a9285.931Labrus_bergylta
ENSTRUG00000004885smarca4a9686.100ENSLBEG00000020655-8986.100Labrus_bergylta
ENSTRUG00000004885smarca4a5875.294ENSLACG00000015309SMARCA410075.736Latimeria_chalumnae
ENSTRUG00000004885smarca4a10080.780ENSLOCG00000007820smarca4a8980.466Lepisosteus_oculatus
ENSTRUG00000004885smarca4a10081.441ENSLAFG00000001433SMARCA48981.497Loxodonta_africana
ENSTRUG00000004885smarca4a10081.267ENSMFAG00000032146SMARCA48881.595Macaca_fascicularis
ENSTRUG00000004885smarca4a10081.267ENSMMUG00000012042SMARCA48981.595Macaca_mulatta
ENSTRUG00000004885smarca4a10081.310ENSMNEG00000028512SMARCA48981.570Macaca_nemestrina
ENSTRUG00000004885smarca4a10081.199ENSMLEG00000034976SMARCA48981.429Mandrillus_leucophaeus
ENSTRUG00000004885smarca4a10079.932ENSMAMG00000002841-9280.616Mastacembelus_armatus
ENSTRUG00000004885smarca4a10088.288ENSMAMG00000009256smarca4a9088.288Mastacembelus_armatus
ENSTRUG00000004885smarca4a10080.150ENSMZEG00005023861-9279.732Maylandia_zebra
ENSTRUG00000004885smarca4a10087.688ENSMZEG00005003889smarca4a9087.962Maylandia_zebra
ENSTRUG00000004885smarca4a10080.965ENSMAUG00000020731Smarca48980.952Mesocricetus_auratus
ENSTRUG00000004885smarca4a10081.305ENSMICG00000009806SMARCA48981.361Microcebus_murinus
ENSTRUG00000004885smarca4a10081.033ENSMOCG00000022209Smarca48981.088Microtus_ochrogaster
ENSTRUG00000004885smarca4a10087.396ENSMMOG00000007571smarca4a9287.327Mola_mola
ENSTRUG00000004885smarca4a10081.250ENSMMOG00000008466-8880.042Mola_mola
ENSTRUG00000004885smarca4a10080.187ENSMODG00000006287SMARCA49079.573Monodelphis_domestica
ENSTRUG00000004885smarca4a9687.812ENSMALG00000003388smarca4a9087.953Monopterus_albus
ENSTRUG00000004885smarca4a9982.994ENSMALG00000021534-9981.621Monopterus_albus
ENSTRUG00000004885smarca4a10081.199MGP_CAROLIEiJ_G0031879Smarca410080.709Mus_caroli
ENSTRUG00000004885smarca4a10081.199ENSMUSG00000032187Smarca49980.709Mus_musculus
ENSTRUG00000004885smarca4a10081.874MGP_PahariEiJ_G0014745Smarca410081.171Mus_pahari
ENSTRUG00000004885smarca4a10081.199MGP_SPRETEiJ_G0033003Smarca410080.709Mus_spretus
ENSTRUG00000004885smarca4a10081.335ENSMPUG00000005711SMARCA48981.459Mustela_putorius_furo
ENSTRUG00000004885smarca4a10081.744ENSMLUG00000004491-8981.595Myotis_lucifugus
ENSTRUG00000004885smarca4a10082.104ENSNGAG00000021852Smarca48981.408Nannospalax_galili
ENSTRUG00000004885smarca4a10090.774ENSNBRG00000011457smarca4a9090.419Neolamprologus_brichardi
ENSTRUG00000004885smarca4a9983.310ENSNBRG00000018865-9982.456Neolamprologus_brichardi
ENSTRUG00000004885smarca4a9981.109ENSNLEG00000012389SMARCA49181.246Nomascus_leucogenys
ENSTRUG00000004885smarca4a8789.655ENSOPRG00000000885-7589.655Ochotona_princeps
ENSTRUG00000004885smarca4a10081.537ENSODEG00000017127SMARCA48980.992Octodon_degus
ENSTRUG00000004885smarca4a10080.067ENSONIG00000018040-9079.866Oreochromis_niloticus
ENSTRUG00000004885smarca4a10088.364ENSONIG00000008196smarca4a9088.364Oreochromis_niloticus
ENSTRUG00000004885smarca4a9977.270ENSOCUG00000001787SMARCA49077.192Oryctolagus_cuniculus
ENSTRUG00000004885smarca4a10079.400ENSORLG00000003955-9679.639Oryzias_latipes
ENSTRUG00000004885smarca4a9684.982ENSORLG00000015452smarca4a8986.594Oryzias_latipes
ENSTRUG00000004885smarca4a10085.167ENSORLG00020004611smarca4a9985.393Oryzias_latipes_hni
ENSTRUG00000004885smarca4a9979.333ENSORLG00020009728-9579.582Oryzias_latipes_hni
ENSTRUG00000004885smarca4a9979.789ENSORLG00015007739-9479.350Oryzias_latipes_hsok
ENSTRUG00000004885smarca4a10085.167ENSORLG00015016560smarca4a9885.189Oryzias_latipes_hsok
ENSTRUG00000004885smarca4a10085.548ENSOMEG00000007486smarca4a8987.046Oryzias_melastigma
ENSTRUG00000004885smarca4a9980.272ENSOGAG00000016148SMARCA410080.068Otolemur_garnettii
ENSTRUG00000004885smarca4a9781.965ENSOARG00000017454SMARCA48781.531Ovis_aries
ENSTRUG00000004885smarca4a10081.267ENSPPAG00000043191SMARCA48981.595Pan_paniscus
ENSTRUG00000004885smarca4a10081.237ENSPPRG00000000064SMARCA48981.293Panthera_pardus
ENSTRUG00000004885smarca4a9484.743ENSPTIG00000017447SMARCA48977.831Panthera_tigris_altaica
ENSTRUG00000004885smarca4a10081.267ENSPTRG00000010488SMARCA48981.595Pan_troglodytes
ENSTRUG00000004885smarca4a10081.378ENSPANG00000011042SMARCA48881.706Papio_anubis
ENSTRUG00000004885smarca4a9684.735ENSPKIG00000007770SMARCA48983.573Paramormyrops_kingsleyae
ENSTRUG00000004885smarca4a10082.050ENSPKIG00000010087-8981.375Paramormyrops_kingsleyae
ENSTRUG00000004885smarca4a10077.258ENSPSIG00000005547SMARCA48977.544Pelodiscus_sinensis
ENSTRUG00000004885smarca4a10081.101ENSPEMG00000020389Smarca48981.156Peromyscus_maniculatus_bairdii
ENSTRUG00000004885smarca4a10082.004ENSPCIG00000017138SMARCA48981.992Phascolarctos_cinereus
ENSTRUG00000004885smarca4a10079.631ENSPFOG00000007892smarca4a9084.699Poecilia_formosa
ENSTRUG00000004885smarca4a10079.214ENSPFOG00000012930-9079.600Poecilia_formosa
ENSTRUG00000004885smarca4a10084.437ENSPLAG00000014294smarca4a9084.766Poecilia_latipinna
ENSTRUG00000004885smarca4a10081.737ENSPLAG00000018616-8981.481Poecilia_latipinna
ENSTRUG00000004885smarca4a10082.300ENSPMEG00000008929-9179.933Poecilia_mexicana
ENSTRUG00000004885smarca4a10083.765ENSPMEG00000003725smarca4a9184.766Poecilia_mexicana
ENSTRUG00000004885smarca4a10081.547ENSPREG00000014823-9179.520Poecilia_reticulata
ENSTRUG00000004885smarca4a10081.962ENSPREG00000014608smarca4a9084.558Poecilia_reticulata
ENSTRUG00000004885smarca4a10078.846ENSPPYG00000009568SMARCA48979.200Pongo_abelii
ENSTRUG00000004885smarca4a7868.439ENSPCAG00000014054SMARCA46768.265Procavia_capensis
ENSTRUG00000004885smarca4a10081.335ENSPCOG00000023011SMARCA48981.293Propithecus_coquereli
ENSTRUG00000004885smarca4a9078.963ENSPVAG00000007787SMARCA48176.879Pteropus_vampyrus
ENSTRUG00000004885smarca4a10082.679ENSPNYG00000023995-9282.105Pundamilia_nyererei
ENSTRUG00000004885smarca4a10089.851ENSPNYG00000000717smarca4a9188.022Pundamilia_nyererei
ENSTRUG00000004885smarca4a10085.125ENSPNAG00000024136smarca4a8984.719Pygocentrus_nattereri
ENSTRUG00000004885smarca4a10082.023ENSPNAG00000006636-8982.349Pygocentrus_nattereri
ENSTRUG00000004885smarca4a10081.267ENSRNOG00000009271Smarca48981.322Rattus_norvegicus
ENSTRUG00000004885smarca4a10081.267ENSRBIG00000038696SMARCA48881.595Rhinopithecus_bieti
ENSTRUG00000004885smarca4a10081.267ENSRROG00000045509SMARCA48981.595Rhinopithecus_roxellana
ENSTRUG00000004885smarca4a10085.839ENSSBOG00000026896SMARCA48886.150Saimiri_boliviensis_boliviensis
ENSTRUG00000004885smarca4a10081.936ENSSHAG00000001642SMARCA48982.128Sarcophilus_harrisii
ENSTRUG00000004885smarca4a9679.858ENSSFOG00015009921-8879.888Scleropages_formosus
ENSTRUG00000004885smarca4a10086.728ENSSFOG00015013823smarca48984.573Scleropages_formosus
ENSTRUG00000004885smarca4a10078.719ENSSMAG00000014082-9180.068Scophthalmus_maximus
ENSTRUG00000004885smarca4a10086.662ENSSMAG00000003200smarca4a9086.459Scophthalmus_maximus
ENSTRUG00000004885smarca4a10083.322ENSSDUG00000017298smarca4a8983.664Seriola_dumerili
ENSTRUG00000004885smarca4a10081.509ENSSDUG00000005388-9379.349Seriola_dumerili
ENSTRUG00000004885smarca4a10089.699ENSSLDG00000024486smarca4a10089.979Seriola_lalandi_dorsalis
ENSTRUG00000004885smarca4a10081.570ENSSLDG00000023663-9181.327Seriola_lalandi_dorsalis
ENSTRUG00000004885smarca4a5996.894ENSSARG00000013477SMARCA47196.894Sorex_araneus
ENSTRUG00000004885smarca4a10079.592ENSSPUG00000004558SMARCA49279.101Sphenodon_punctatus
ENSTRUG00000004885smarca4a10083.170ENSSPAG00000012533-8982.415Stegastes_partitus
ENSTRUG00000004885smarca4a10090.490ENSSPAG00000004248smarca4a8990.703Stegastes_partitus
ENSTRUG00000004885smarca4a10081.399ENSSSCG00000013629SMARCA48981.454Sus_scrofa
ENSTRUG00000004885smarca4a5689.922ENSTGUG00000015488-9880.572Taeniopygia_guttata
ENSTRUG00000004885smarca4a10080.232ENSTNIG00000004536SMARCA49079.376Tetraodon_nigroviridis
ENSTRUG00000004885smarca4a7888.618ENSTNIG00000004859-9790.650Tetraodon_nigroviridis
ENSTRUG00000004885smarca4a54100.000ENSTBEG00000000707-52100.000Tupaia_belangeri
ENSTRUG00000004885smarca4a10078.348ENSTTRG00000009519SMARCA49078.133Tursiops_truncatus
ENSTRUG00000004885smarca4a10081.403ENSUAMG00000014661SMARCA48981.527Ursus_americanus
ENSTRUG00000004885smarca4a9982.057ENSUMAG00000022005SMARCA48787.511Ursus_maritimus
ENSTRUG00000004885smarca4a10081.403ENSVVUG00000017820SMARCA48781.527Vulpes_vulpes
ENSTRUG00000004885smarca4a10078.552ENSXETG00000009355smarca49978.592Xenopus_tropicalis
ENSTRUG00000004885smarca4a10084.006ENSXCOG00000013494-8883.428Xiphophorus_couchianus
ENSTRUG00000004885smarca4a10085.325ENSXMAG00000006321smarca4a10086.233Xiphophorus_maculatus
ENSTRUG00000004885smarca4a10082.353ENSXMAG00000007030-8982.035Xiphophorus_maculatus

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