EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSTRUG00000004894 (Gene tree)
Gene ID
-
Gene Symbol
rbfox3b
Alias
rbfox3l|si:ch73-322f21.1
Full Name
RNA binding protein fox-1 homolog 3-like
Gene Type
protein_coding
Species
Takifugu_rubripes
Status
putative
Strand
Minus strand
Length
30069 bases
Position
chr5:11594762-11624830
Accession
101078375
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSTRUP00000011677Fox-1_CPF12414.82.9e-3311
ENSTRUP00000011678Fox-1_CPF12414.83.6e-3311
ENSTRUP00000011680Fox-1_CPF12414.82e-2611
ENSTRUP00000011678RRM_1PF00076.221.3e-1811
ENSTRUP00000011677RRM_1PF00076.221.3e-1811
ENSTRUP00000011680RRM_1PF00076.221.7e-1811
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSTRUT00000011737-1059XM_011604316ENSTRUP00000011677352 (aa)XP_011602618H2SGZ5
ENSTRUT00000011740-1260-ENSTRUP00000011680419 (aa)-H2SGZ8
ENSTRUT00000011738-1077-ENSTRUP00000011678358 (aa)-H2SGZ6
Gene Model
Click here to download ENSTRUG00000004894's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSTRUG00000004894's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSTRUG00000004894rbfox3b9663.510ENSTRUG00000020940rbfox19763.788
ENSTRUG00000004894rbfox3b9746.615ENSTRUG00000007739-9547.043
ENSTRUG00000004894rbfox3b6467.241ENSTRUG00000015905rbfox1l6268.559
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSTRUG00000004894rbfox3b8675.974ENSG00000167281RBFOX310077.848Homo_sapiens
ENSTRUG00000004894rbfox3b9661.345ENSAPOG00000015658-9459.331Acanthochromis_polyacanthus
ENSTRUG00000004894rbfox3b9790.490ENSAPOG00000021630rbfox3b9089.884Acanthochromis_polyacanthus
ENSTRUG00000004894rbfox3b9968.329ENSAMEG00000014170RBFOX39969.077Ailuropoda_melanoleuca
ENSTRUG00000004894rbfox3b7673.868ENSACIG00000003768-8770.159Amphilophus_citrinellus
ENSTRUG00000004894rbfox3b9184.000ENSACIG00000010817rbfox3b10084.923Amphilophus_citrinellus
ENSTRUG00000004894rbfox3b9674.719ENSAOCG00000010786-9074.238Amphiprion_ocellaris
ENSTRUG00000004894rbfox3b9390.090ENSAOCG00000012358rbfox3b8989.851Amphiprion_ocellaris
ENSTRUG00000004894rbfox3b9766.327ENSAPEG00000015891-9267.546Amphiprion_percula
ENSTRUG00000004894rbfox3b9480.769ENSAPEG00000019081rbfox3b8881.361Amphiprion_percula
ENSTRUG00000004894rbfox3b9178.028ENSATEG00000019945rbfox3b10080.000Anabas_testudineus
ENSTRUG00000004894rbfox3b8771.835ENSATEG00000023101-9773.313Anabas_testudineus
ENSTRUG00000004894rbfox3b9376.418ENSACAG00000016093RBFOX39476.106Anolis_carolinensis
ENSTRUG00000004894rbfox3b8675.325ENSANAG00000023457RBFOX310077.532Aotus_nancymaae
ENSTRUG00000004894rbfox3b9789.049ENSACLG00000020011rbfox3b10088.854Astatotilapia_calliptera
ENSTRUG00000004894rbfox3b9477.612ENSACLG00000025552-8977.612Astatotilapia_calliptera
ENSTRUG00000004894rbfox3b9480.896ENSAMXG00000042841rbfox3b9380.896Astyanax_mexicanus
ENSTRUG00000004894rbfox3b9480.531ENSAMXG00000037246rbfox3a9880.952Astyanax_mexicanus
ENSTRUG00000004894rbfox3b7279.923ENSBTAG00000006280RBFOX310059.504Bos_taurus
ENSTRUG00000004894rbfox3b8670.455ENSCJAG00000009563RBFOX310067.956Callithrix_jacchus
ENSTRUG00000004894rbfox3b6979.675ENSCAFG00000005547RBFOX310073.776Canis_familiaris
ENSTRUG00000004894rbfox3b9065.583ENSCAFG00020008126RBFOX310068.435Canis_lupus_dingo
ENSTRUG00000004894rbfox3b9065.583ENSCHIG00000009124RBFOX310068.435Capra_hircus
ENSTRUG00000004894rbfox3b8665.915ENSTSYG00000029617RBFOX310068.508Carlito_syrichta
ENSTRUG00000004894rbfox3b9066.125ENSCPOG00000021703RBFOX310068.435Cavia_porcellus
ENSTRUG00000004894rbfox3b8675.325ENSCCAG00000028450RBFOX310077.532Cebus_capucinus
ENSTRUG00000004894rbfox3b8675.974ENSCATG00000018349RBFOX310077.848Cercocebus_atys
ENSTRUG00000004894rbfox3b9066.125ENSCLAG00000006449RBFOX310068.435Chinchilla_lanigera
ENSTRUG00000004894rbfox3b8675.974ENSCSAG00000002355RBFOX310077.848Chlorocebus_sabaeus
ENSTRUG00000004894rbfox3b9779.827ENSCPBG00000010904RBFOX310078.882Chrysemys_picta_bellii
ENSTRUG00000004894rbfox3b8675.974ENSCANG00000043120RBFOX310077.848Colobus_angolensis_palliatus
ENSTRUG00000004894rbfox3b9066.667ENSCGRG00001019476Rbfox310068.966Cricetulus_griseus_chok1gshd
ENSTRUG00000004894rbfox3b9066.667ENSCGRG00000003268Rbfox310068.966Cricetulus_griseus_crigri
ENSTRUG00000004894rbfox3b9575.516ENSCSEG00000015567RBFOX39971.788Cynoglossus_semilaevis
ENSTRUG00000004894rbfox3b9767.335ENSCSEG00000020606RBFOX38771.336Cynoglossus_semilaevis
ENSTRUG00000004894rbfox3b9390.090ENSCVAG00000006882rbfox3b8989.458Cyprinodon_variegatus
ENSTRUG00000004894rbfox3b9480.473ENSDARG00000010083rbfox3a9980.952Danio_rerio
ENSTRUG00000004894rbfox3b9868.286ENSDARG00000074310rbfox3b9773.799Danio_rerio
ENSTRUG00000004894rbfox3b7363.518ENSDNOG00000039391RBFOX310054.569Dasypus_novemcinctus
ENSTRUG00000004894rbfox3b9059.239ENSDORG00000005352Rbfox310062.667Dipodomys_ordii
ENSTRUG00000004894rbfox3b9765.278ENSEBUG00000002129RBFOX39966.667Eptatretus_burgeri
ENSTRUG00000004894rbfox3b7956.655ENSEBUG00000013559RBFOX38156.655Eptatretus_burgeri
ENSTRUG00000004894rbfox3b8677.273ENSEASG00005005059RBFOX310077.848Equus_asinus_asinus
ENSTRUG00000004894rbfox3b8676.948ENSECAG00000023811RBFOX310077.532Equus_caballus
ENSTRUG00000004894rbfox3b8074.372ENSEEUG00000013974RBFOX37676.329Erinaceus_europaeus
ENSTRUG00000004894rbfox3b5267.213ENSELUG00000009807-6359.070Esox_lucius
ENSTRUG00000004894rbfox3b9786.744ENSELUG00000017963rbfox3b10077.381Esox_lucius
ENSTRUG00000004894rbfox3b9375.821ENSFCAG00000002555RBFOX310077.576Felis_catus
ENSTRUG00000004894rbfox3b9759.951ENSFALG00000012288RBFOX39960.396Ficedula_albicollis
ENSTRUG00000004894rbfox3b9061.518ENSFDAG00000007489RBFOX310063.660Fukomys_damarensis
ENSTRUG00000004894rbfox3b9078.882ENSFHEG00000008550rbfox3b10079.814Fundulus_heteroclitus
ENSTRUG00000004894rbfox3b9266.129ENSGMOG00000019304-10066.129Gadus_morhua
ENSTRUG00000004894rbfox3b9378.743ENSGALG00000032889RBFOX39477.745Gallus_gallus
ENSTRUG00000004894rbfox3b9481.765ENSGAFG00000005025rbfox3b8886.943Gambusia_affinis
ENSTRUG00000004894rbfox3b9065.312ENSGACG00000002138-10067.188Gasterosteus_aculeatus
ENSTRUG00000004894rbfox3b10077.095ENSGAGG00000020025RBFOX310078.882Gopherus_agassizii
ENSTRUG00000004894rbfox3b8675.974ENSGGOG00000012546RBFOX310077.848Gorilla_gorilla
ENSTRUG00000004894rbfox3b9789.049ENSHBUG00000018099rbfox3b8989.676Haplochromis_burtoni
ENSTRUG00000004894rbfox3b9778.161ENSHBUG00000023098-9878.161Haplochromis_burtoni
ENSTRUG00000004894rbfox3b9065.946ENSHGLG00000008679RBFOX310067.959Heterocephalus_glaber_female
ENSTRUG00000004894rbfox3b9063.784ENSHGLG00100014739RBFOX310065.608Heterocephalus_glaber_male
ENSTRUG00000004894rbfox3b9168.615ENSHCOG00000001863RBFOX39370.159Hippocampus_comes
ENSTRUG00000004894rbfox3b8780.892ENSHCOG00000007444RBFOX38379.257Hippocampus_comes
ENSTRUG00000004894rbfox3b9171.067ENSIPUG00000021966rbfox3b9885.938Ictalurus_punctatus
ENSTRUG00000004894rbfox3b9779.429ENSIPUG00000012010rbfox3a9878.869Ictalurus_punctatus
ENSTRUG00000004894rbfox3b9063.190ENSSTOG00000026817RBFOX310064.371Ictidomys_tridecemlineatus
ENSTRUG00000004894rbfox3b9064.770ENSJJAG00000014167Rbfox310068.435Jaculus_jaculus
ENSTRUG00000004894rbfox3b9390.090ENSKMAG00000006726rbfox3b8989.851Kryptolebias_marmoratus
ENSTRUG00000004894rbfox3b9789.685ENSLBEG00000004030rbfox3b10084.308Labrus_bergylta
ENSTRUG00000004894rbfox3b9479.701ENSLBEG00000022508-8979.701Labrus_bergylta
ENSTRUG00000004894rbfox3b5359.474ENSLACG00000000021-9561.257Latimeria_chalumnae
ENSTRUG00000004894rbfox3b9764.838ENSLACG00000018409-10065.174Latimeria_chalumnae
ENSTRUG00000004894rbfox3b9384.384ENSLOCG00000012267rbfox3a9884.384Lepisosteus_oculatus
ENSTRUG00000004894rbfox3b9767.669ENSLAFG00000016623RBFOX310068.883Loxodonta_africana
ENSTRUG00000004894rbfox3b9065.854ENSMFAG00000002247RBFOX310068.232Macaca_fascicularis
ENSTRUG00000004894rbfox3b8675.974ENSMMUG00000023028RBFOX310077.848Macaca_mulatta
ENSTRUG00000004894rbfox3b8675.649ENSMNEG00000041147RBFOX310077.532Macaca_nemestrina
ENSTRUG00000004894rbfox3b8675.974ENSMLEG00000025686RBFOX310077.848Mandrillus_leucophaeus
ENSTRUG00000004894rbfox3b8983.333ENSMAMG00000019810rbfox3b10082.692Mastacembelus_armatus
ENSTRUG00000004894rbfox3b9772.853ENSMAMG00000020600-9972.853Mastacembelus_armatus
ENSTRUG00000004894rbfox3b9789.049ENSMZEG00005000781rbfox3b8989.676Maylandia_zebra
ENSTRUG00000004894rbfox3b7267.018ENSMZEG00005003055-5488.710Maylandia_zebra
ENSTRUG00000004894rbfox3b6577.253ENSMGAG00000005600RBFOX38677.682Meleagris_gallopavo
ENSTRUG00000004894rbfox3b9065.854ENSMAUG00000013543Rbfox310067.708Mesocricetus_auratus
ENSTRUG00000004894rbfox3b9375.676ENSMICG00000014898RBFOX310076.266Microcebus_murinus
ENSTRUG00000004894rbfox3b9065.583ENSMOCG00000015373Rbfox310067.639Microtus_ochrogaster
ENSTRUG00000004894rbfox3b9487.761ENSMMOG00000020193rbfox3b9981.530Mola_mola
ENSTRUG00000004894rbfox3b9376.946ENSMODG00000002089RBFOX39375.964Monodelphis_domestica
ENSTRUG00000004894rbfox3b9977.746ENSMALG00000018270-9773.394Monopterus_albus
ENSTRUG00000004894rbfox3b9488.358ENSMALG00000020407rbfox3b8988.358Monopterus_albus
ENSTRUG00000004894rbfox3b9076.087MGP_CAROLIEiJ_G0017487Rbfox39687.770Mus_caroli
ENSTRUG00000004894rbfox3b9076.087ENSMUSG00000025576Rbfox39687.770Mus_musculus
ENSTRUG00000004894rbfox3b9077.019MGP_PahariEiJ_G0018614Rbfox39688.489Mus_pahari
ENSTRUG00000004894rbfox3b9076.398MGP_SPRETEiJ_G0018331Rbfox39687.770Mus_spretus
ENSTRUG00000004894rbfox3b9969.643ENSMPUG00000012319RBFOX39970.408Mustela_putorius_furo
ENSTRUG00000004894rbfox3b9066.396ENSNGAG00000018006Rbfox310068.435Nannospalax_galili
ENSTRUG00000004894rbfox3b9387.387ENSNBRG00000010102rbfox3b8987.538Neolamprologus_brichardi
ENSTRUG00000004894rbfox3b9471.810ENSNBRG00000022885-9072.997Neolamprologus_brichardi
ENSTRUG00000004894rbfox3b5671.359ENSNLEG00000000153-9655.657Nomascus_leucogenys
ENSTRUG00000004894rbfox3b7780.000ENSMEUG00000004218-10052.235Notamacropus_eugenii
ENSTRUG00000004894rbfox3b7775.635ENSOPRG00000016279-7876.720Ochotona_princeps
ENSTRUG00000004894rbfox3b8675.974ENSODEG00000009433RBFOX310077.532Octodon_degus
ENSTRUG00000004894rbfox3b9389.790ENSONIG00000009549rbfox3b10080.800Oreochromis_niloticus
ENSTRUG00000004894rbfox3b9576.540ENSONIG00000007282-9776.540Oreochromis_niloticus
ENSTRUG00000004894rbfox3b6957.439ENSOCUG00000014217RBFOX37460.370Oryctolagus_cuniculus
ENSTRUG00000004894rbfox3b9789.914ENSORLG00000000905rbfox3b7387.535Oryzias_latipes
ENSTRUG00000004894rbfox3b9789.914ENSORLG00020018030rbfox3b8989.254Oryzias_latipes_hni
ENSTRUG00000004894rbfox3b9787.465ENSORLG00015009200rbfox3b9979.193Oryzias_latipes_hsok
ENSTRUG00000004894rbfox3b7290.335ENSOMEG00000014677rbfox3b7689.547Oryzias_melastigma
ENSTRUG00000004894rbfox3b9770.933ENSOGAG00000029595RBFOX39871.467Otolemur_garnettii
ENSTRUG00000004894rbfox3b9753.922ENSOARG00000002908RBFOX39954.337Ovis_aries
ENSTRUG00000004894rbfox3b7279.923ENSPPAG00000025383RBFOX39779.783Pan_paniscus
ENSTRUG00000004894rbfox3b8663.897ENSPPRG00000007819RBFOX310068.258Panthera_pardus
ENSTRUG00000004894rbfox3b8675.974ENSPTRG00000009727RBFOX310077.848Pan_troglodytes
ENSTRUG00000004894rbfox3b8675.974ENSPANG00000019837RBFOX310077.848Papio_anubis
ENSTRUG00000004894rbfox3b9784.726ENSPKIG00000010299rbfox3a9278.356Paramormyrops_kingsleyae
ENSTRUG00000004894rbfox3b9765.429ENSPKIG00000022633-9267.062Paramormyrops_kingsleyae
ENSTRUG00000004894rbfox3b8090.175ENSPMGG00000008000rbfox3b9087.543Periophthalmus_magnuspinnatus
ENSTRUG00000004894rbfox3b9066.125ENSPEMG00000010500Rbfox310068.170Peromyscus_maniculatus_bairdii
ENSTRUG00000004894rbfox3b5571.707ENSPMAG00000008689rbfox3b9973.171Petromyzon_marinus
ENSTRUG00000004894rbfox3b9366.667ENSPCIG00000005766RBFOX310068.571Phascolarctos_cinereus
ENSTRUG00000004894rbfox3b9790.490ENSPFOG00000018294rbfox3b9089.884Poecilia_formosa
ENSTRUG00000004894rbfox3b7384.733ENSPLAG00000000481rbfox3b7984.733Poecilia_latipinna
ENSTRUG00000004894rbfox3b9078.882ENSPMEG00000022997rbfox3b10080.124Poecilia_mexicana
ENSTRUG00000004894rbfox3b9588.235ENSPREG00000012886rbfox3b9588.824Poecilia_reticulata
ENSTRUG00000004894rbfox3b9765.616ENSPPYG00000008704RBFOX310066.382Pongo_abelii
ENSTRUG00000004894rbfox3b8662.994ENSPCAG00000001401RBFOX310066.482Procavia_capensis
ENSTRUG00000004894rbfox3b9263.588ENSPCOG00000012689RBFOX310067.127Propithecus_coquereli
ENSTRUG00000004894rbfox3b8657.345ENSPVAG00000015243RBFOX310060.388Pteropus_vampyrus
ENSTRUG00000004894rbfox3b9481.711ENSPNYG00000010414rbfox3b8881.711Pundamilia_nyererei
ENSTRUG00000004894rbfox3b9472.189ENSPNYG00000009079-8673.373Pundamilia_nyererei
ENSTRUG00000004894rbfox3b9781.534ENSPNAG00000002889rbfox3a8981.818Pygocentrus_nattereri
ENSTRUG00000004894rbfox3b8868.810ENSPNAG00000018173rbfox3b9168.810Pygocentrus_nattereri
ENSTRUG00000004894rbfox3b8676.299ENSRNOG00000003386Rbfox310077.532Rattus_norvegicus
ENSTRUG00000004894rbfox3b9376.119ENSRBIG00000040449RBFOX39375.444Rhinopithecus_bieti
ENSTRUG00000004894rbfox3b8675.974ENSRROG00000000766RBFOX310077.848Rhinopithecus_roxellana
ENSTRUG00000004894rbfox3b8675.325ENSSBOG00000031591RBFOX310077.532Saimiri_boliviensis_boliviensis
ENSTRUG00000004894rbfox3b9766.098ENSSHAG00000016076RBFOX310068.571Sarcophilus_harrisii
ENSTRUG00000004894rbfox3b9470.920ENSSFOG00015004716RBFOX39271.217Scleropages_formosus
ENSTRUG00000004894rbfox3b9785.303ENSSFOG00015023260rbfox3a8985.303Scleropages_formosus
ENSTRUG00000004894rbfox3b9477.015ENSSMAG00000019052-10077.019Scophthalmus_maximus
ENSTRUG00000004894rbfox3b9788.022ENSSMAG00000012618rbfox3b7786.957Scophthalmus_maximus
ENSTRUG00000004894rbfox3b9874.722ENSSDUG00000015801-9677.101Seriola_dumerili
ENSTRUG00000004894rbfox3b9078.882ENSSDUG00000023183rbfox3b10079.814Seriola_dumerili
ENSTRUG00000004894rbfox3b9773.961ENSSLDG00000016098-9774.167Seriola_lalandi_dorsalis
ENSTRUG00000004894rbfox3b9389.790ENSSLDG00000000149rbfox3b8989.552Seriola_lalandi_dorsalis
ENSTRUG00000004894rbfox3b8677.597ENSSPUG00000011733RBFOX39978.864Sphenodon_punctatus
ENSTRUG00000004894rbfox3b9479.586ENSSPAG00000017571rbfox3b8880.769Stegastes_partitus
ENSTRUG00000004894rbfox3b7572.015ENSSPAG00000004898-8968.627Stegastes_partitus
ENSTRUG00000004894rbfox3b7976.140ENSSSCG00000039498RBFOX310067.155Sus_scrofa
ENSTRUG00000004894rbfox3b9877.561ENSTNIG00000011278rbfox3b10078.049Tetraodon_nigroviridis
ENSTRUG00000004894rbfox3b8842.382ENSTBEG00000004296-8480.556Tupaia_belangeri
ENSTRUG00000004894rbfox3b8659.155ENSTTRG00000003676RBFOX310062.431Tursiops_truncatus
ENSTRUG00000004894rbfox3b8676.299ENSUAMG00000004668RBFOX310077.848Ursus_americanus
ENSTRUG00000004894rbfox3b9777.077ENSVVUG00000017864RBFOX310077.532Vulpes_vulpes
ENSTRUG00000004894rbfox3b9959.113ENSXETG00000020236rbfox39859.799Xenopus_tropicalis
ENSTRUG00000004894rbfox3b9388.024ENSXCOG00000018262rbfox3b10084.112Xiphophorus_couchianus
ENSTRUG00000004894rbfox3b9790.202ENSXMAG00000012939rbfox3b9089.595Xiphophorus_maculatus

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