EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTRUG00000004984 (Gene tree)
Gene ID: 101066471
Gene Symbol: rab18a
Alias: fc62e07|wu:fc62e07|zgc:77145
Full Name: ras-related protein Rab-18
Gene Type: protein_coding
Species: Takifugu_rubripes
Status: putative
Strand: Plus strand
Length: 6060 bases
Position: chrHE591771.1:462931-468990
Accession: 101066471
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTRUP00000011938	MMR_HSR1	PF01926.23	5.8e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTRUT00000011999	-	543	-	ENSTRUP00000011939	180 (aa)	-	H2SHQ7
ENSTRUT00000011998	-	615	XM_003979897	ENSTRUP00000011938	204 (aa)	XP_003979946	H2SHQ6

Gene Model

Click here to download ENSTRUG00000004984's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTRUG00000004984's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTRUG00000004984	rab18a	80	46.341	ENSTRUG00000025076	si:dkey-16l2.16	87	56.250
ENSTRUG00000004984	rab18a	87	32.967	ENSTRUG00000004902	rheb	91	32.967
ENSTRUG00000004984	rab18a	93	47.423	ENSTRUG00000024994	RAB1A	96	47.423
ENSTRUG00000004984	rab18a	88	46.409	ENSTRUG00000024177	rab13	90	46.409
ENSTRUG00000004984	rab18a	80	38.922	ENSTRUG00000010082	RAB7A	81	38.922
ENSTRUG00000004984	rab18a	99	34.146	ENSTRUG00000015697	rab23	86	34.146
ENSTRUG00000004984	rab18a	79	49.390	ENSTRUG00000024455	rab12	67	49.390
ENSTRUG00000004984	rab18a	80	37.725	ENSTRUG00000008698	rab9a	83	37.725
ENSTRUG00000004984	rab18a	71	42.857	ENSTRUG00000009903	zgc:101559	63	42.857
ENSTRUG00000004984	rab18a	84	52.023	ENSTRUG00000022559	rab30	84	52.023
ENSTRUG00000004984	rab18a	83	40.116	ENSTRUG00000025018	rab39bb	81	40.116
ENSTRUG00000004984	rab18a	82	37.059	ENSTRUG00000005805	mras	81	37.059
ENSTRUG00000004984	rab18a	80	40.606	ENSTRUG00000010224	rab42a	76	40.606
ENSTRUG00000004984	rab18a	79	40.361	ENSTRUG00000020335	rab33a	65	40.361
ENSTRUG00000004984	rab18a	94	43.367	ENSTRUG00000007504	rab25b	93	43.367
ENSTRUG00000004984	rab18a	99	79.412	ENSTRUG00000004283	rab18b	99	80.392
ENSTRUG00000004984	rab18a	81	50.299	ENSTRUG00000004287	rab1ba	83	50.299
ENSTRUG00000004984	rab18a	79	31.928	ENSTRUG00000023427	dnajc27	61	31.928
ENSTRUG00000004984	rab18a	84	35.632	ENSTRUG00000012454	rabl2	76	35.632
ENSTRUG00000004984	rab18a	81	32.353	ENSTRUG00000020012	rhebl1	90	32.353
ENSTRUG00000004984	rab18a	85	48.851	ENSTRUG00000020633	rab35b	99	44.554
ENSTRUG00000004984	rab18a	93	48.421	ENSTRUG00000003363	rab2a	97	48.421
ENSTRUG00000004984	rab18a	80	38.922	ENSTRUG00000020093	-	81	38.922
ENSTRUG00000004984	rab18a	89	32.609	ENSTRUG00000023449	kras	97	32.609
ENSTRUG00000004984	rab18a	79	46.914	ENSTRUG00000021619	-	75	46.914
ENSTRUG00000004984	rab18a	79	46.914	ENSTRUG00000021614	-	74	46.914
ENSTRUG00000004984	rab18a	80	44.848	ENSTRUG00000015590	rab5c	91	41.791
ENSTRUG00000004984	rab18a	79	39.157	ENSTRUG00000013963	RAB9A	83	39.157
ENSTRUG00000004984	rab18a	85	31.818	ENSTRUG00000014481	rab34b	71	31.818
ENSTRUG00000004984	rab18a	80	47.273	ENSTRUG00000011399	-	76	47.273
ENSTRUG00000004984	rab18a	83	38.596	ENSTRUG00000009223	rab41	79	38.596
ENSTRUG00000004984	rab18a	73	36.667	ENSTRUG00000017384	rras2	79	36.646
ENSTRUG00000004984	rab18a	80	43.030	ENSTRUG00000018380	rab22a	85	43.030
ENSTRUG00000004984	rab18a	83	40.351	ENSTRUG00000004881	rab6bb	80	40.351
ENSTRUG00000004984	rab18a	82	44.970	ENSTRUG00000007556	rab11al	94	46.939
ENSTRUG00000004984	rab18a	80	42.683	ENSTRUG00000014783	RAB15	77	42.683
ENSTRUG00000004984	rab18a	79	46.296	ENSTRUG00000020792	rab11a	75	46.296
ENSTRUG00000004984	rab18a	90	40.642	ENSTRUG00000024368	rab5aa	86	40.642
ENSTRUG00000004984	rab18a	79	46.914	ENSTRUG00000022029	rab11bb	74	46.914
ENSTRUG00000004984	rab18a	80	40.588	ENSTRUG00000007036	rab33ba	71	40.588
ENSTRUG00000004984	rab18a	87	34.946	ENSTRUG00000010393	-	70	34.946
ENSTRUG00000004984	rab18a	87	39.106	ENSTRUG00000023252	rab6a	84	39.106
ENSTRUG00000004984	rab18a	79	45.399	ENSTRUG00000017824	rab15	76	45.399
ENSTRUG00000004984	rab18a	79	31.098	ENSTRUG00000023011	rerg	81	31.098
ENSTRUG00000004984	rab18a	81	33.133	ENSTRUG00000024825	hrasb	87	33.133
ENSTRUG00000004984	rab18a	83	31.765	ENSTRUG00000013749	ran	78	31.765
ENSTRUG00000004984	rab18a	81	43.976	ENSTRUG00000014595	-	76	44.720
ENSTRUG00000004984	rab18a	95	46.939	ENSTRUG00000023164	rab1ab	97	46.939

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTRUG00000004984	rab18a	100	93.627	ENSAPOG00000010760	rab18a	100	93.627	Acanthochromis_polyacanthus
ENSTRUG00000004984	rab18a	100	82.353	ENSACIG00000009617	rab18a	100	82.353	Amphilophus_citrinellus
ENSTRUG00000004984	rab18a	100	94.118	ENSAOCG00000016233	rab18a	100	94.118	Amphiprion_ocellaris
ENSTRUG00000004984	rab18a	100	94.118	ENSAPEG00000005392	rab18a	100	94.118	Amphiprion_percula
ENSTRUG00000004984	rab18a	100	94.118	ENSATEG00000021911	rab18a	100	94.118	Anabas_testudineus
ENSTRUG00000004984	rab18a	100	86.341	ENSACAG00000005463	-	100	86.341	Anolis_carolinensis
ENSTRUG00000004984	rab18a	100	92.647	ENSACLG00000011484	rab18a	100	92.647	Astatotilapia_calliptera
ENSTRUG00000004984	rab18a	96	71.642	ENSCPBG00000027619	-	98	71.642	Chrysemys_picta_bellii
ENSTRUG00000004984	rab18a	100	84.951	ENSCPBG00000015839	-	100	84.951	Chrysemys_picta_bellii
ENSTRUG00000004984	rab18a	97	76.382	ENSCING00000006838	-	99	76.382	Ciona_intestinalis
ENSTRUG00000004984	rab18a	97	75.879	ENSCSAVG00000010348	-	99	75.879	Ciona_savignyi
ENSTRUG00000004984	rab18a	100	93.627	ENSCSEG00000011816	rab18a	100	93.627	Cynoglossus_semilaevis
ENSTRUG00000004984	rab18a	94	91.146	ENSCVAG00000015451	rab18a	100	90.686	Cyprinodon_variegatus
ENSTRUG00000004984	rab18a	100	82.927	ENSDARG00000055291	rab18a	100	82.927	Danio_rerio
ENSTRUG00000004984	rab18a	100	89.268	ENSELUG00000003805	rab18a	100	89.268	Esox_lucius
ENSTRUG00000004984	rab18a	94	92.708	ENSFHEG00000019455	rab18a	100	92.157	Fundulus_heteroclitus
ENSTRUG00000004984	rab18a	94	92.147	ENSGAFG00000002790	rab18a	100	91.176	Gambusia_affinis
ENSTRUG00000004984	rab18a	100	84.951	ENSGAGG00000015642	-	100	84.951	Gopherus_agassizii
ENSTRUG00000004984	rab18a	100	92.647	ENSHBUG00000001518	rab18a	100	92.647	Haplochromis_burtoni
ENSTRUG00000004984	rab18a	99	94.581	ENSLBEG00000005861	rab18a	95	94.581	Labrus_bergylta
ENSTRUG00000004984	rab18a	93	88.421	ENSLACG00000009310	rab18a	100	86.408	Latimeria_chalumnae
ENSTRUG00000004984	rab18a	100	87.805	ENSLOCG00000007491	rab18a	100	87.805	Lepisosteus_oculatus
ENSTRUG00000004984	rab18a	100	92.157	ENSMAMG00000014320	rab18a	100	92.157	Mastacembelus_armatus
ENSTRUG00000004984	rab18a	100	92.157	ENSMZEG00005017235	rab18a	100	92.157	Maylandia_zebra
ENSTRUG00000004984	rab18a	100	94.608	ENSMALG00000009813	rab18a	100	94.608	Monopterus_albus
ENSTRUG00000004984	rab18a	100	92.647	ENSNBRG00000013507	rab18a	100	92.647	Neolamprologus_brichardi
ENSTRUG00000004984	rab18a	94	91.146	ENSORLG00000004624	rab18a	100	91.176	Oryzias_latipes
ENSTRUG00000004984	rab18a	94	91.667	ENSORLG00020008333	rab18a	100	91.667	Oryzias_latipes_hni
ENSTRUG00000004984	rab18a	94	91.146	ENSORLG00015004739	rab18a	100	91.176	Oryzias_latipes_hsok
ENSTRUG00000004984	rab18a	100	91.176	ENSOMEG00000020605	rab18a	100	91.176	Oryzias_melastigma
ENSTRUG00000004984	rab18a	100	85.854	ENSPKIG00000009825	rab18a	100	85.854	Paramormyrops_kingsleyae
ENSTRUG00000004984	rab18a	100	91.176	ENSPMGG00000020409	-	100	91.176	Periophthalmus_magnuspinnatus
ENSTRUG00000004984	rab18a	94	92.147	ENSPFOG00000007571	rab18a	100	91.176	Poecilia_formosa
ENSTRUG00000004984	rab18a	94	92.147	ENSPLAG00000010104	rab18a	100	91.176	Poecilia_latipinna
ENSTRUG00000004984	rab18a	94	92.147	ENSPMEG00000013085	rab18a	100	91.176	Poecilia_mexicana
ENSTRUG00000004984	rab18a	94	92.147	ENSPREG00000005923	rab18a	83	91.176	Poecilia_reticulata
ENSTRUG00000004984	rab18a	100	92.647	ENSPNYG00000007064	rab18a	100	92.647	Pundamilia_nyererei
ENSTRUG00000004984	rab18a	99	80.597	ENSPNAG00000011548	rab18a	100	80.597	Pygocentrus_nattereri
ENSTRUG00000004984	rab18a	100	88.780	ENSSFOG00015017444	rab18a	84	88.780	Scleropages_formosus
ENSTRUG00000004984	rab18a	94	91.192	ENSSMAG00000002969	rab18a	100	91.220	Scophthalmus_maximus
ENSTRUG00000004984	rab18a	94	93.750	ENSSDUG00000003823	rab18a	100	93.627	Seriola_dumerili
ENSTRUG00000004984	rab18a	94	93.750	ENSSLDG00000006977	rab18a	100	93.627	Seriola_lalandi_dorsalis
ENSTRUG00000004984	rab18a	93	87.368	ENSSPUG00000017677	-	100	85.437	Sphenodon_punctatus
ENSTRUG00000004984	rab18a	100	85.922	ENSUMAG00000015574	-	100	85.922	Ursus_maritimus
ENSTRUG00000004984	rab18a	100	86.893	ENSXETG00000004556	rab18	100	87.379	Xenopus_tropicalis
ENSTRUG00000004984	rab18a	94	92.147	ENSXMAG00000024122	rab18a	100	91.176	Xiphophorus_maculatus