EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSTRUG00000004996 (Gene tree)
Gene ID: 101063730
Gene Symbol: larp7
Alias: fa10g04|wu:fa10g04|zgc:56476
Full Name: La ribonucleoprotein domain family member 7
Gene Type: protein_coding
Species: Takifugu_rubripes
Status: putative
Strand: Minus strand
Length: 3069 bases
Position: chr8:14565971-14569039
Accession: 101063730
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTRUP00000057584	RRM_1	PF00076.22	6.9e-17	1	1
ENSTRUP00000011960	RRM_1	PF00076.22	7.1e-17	1	1
ENSTRUP00000011960	RRM_3	PF08777.11	5e-31	1	1
ENSTRUP00000057584	RRM_3	PF08777.11	3e-19	1	1
ENSTRUP00000057584	La	PF05383.17	7.8e-23	1	1
ENSTRUP00000011960	La	PF05383.17	7.9e-23	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTRUT00000012020	-	2196	XM_003966975	ENSTRUP00000011960	520 (aa)	XP_003967024	H2SHS8
ENSTRUT00000058376	-	2264	-	ENSTRUP00000057584	505 (aa)	-	-

Gene Model

Click here to download ENSTRUG00000004996's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTRUG00000004996's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTRUG00000004996	larp7	96	50.540	ENSG00000174720	LARP7	89	66.957	Homo_sapiens
ENSTRUG00000004996	larp7	99	67.812	ENSAPOG00000014570	larp7	98	67.812	Acanthochromis_polyacanthus
ENSTRUG00000004996	larp7	96	50.725	ENSAMEG00000015642	LARP7	88	48.425	Ailuropoda_melanoleuca
ENSTRUG00000004996	larp7	99	64.144	ENSACIG00000023850	larp7	100	63.702	Amphilophus_citrinellus
ENSTRUG00000004996	larp7	96	68.275	ENSAOCG00000016160	larp7	98	67.812	Amphiprion_ocellaris
ENSTRUG00000004996	larp7	96	68.646	ENSAPEG00000021823	larp7	98	67.812	Amphiprion_percula
ENSTRUG00000004996	larp7	99	67.204	ENSATEG00000016238	larp7	98	65.412	Anabas_testudineus
ENSTRUG00000004996	larp7	96	53.322	ENSAPLG00000012887	LARP7	97	51.024	Anas_platyrhynchos
ENSTRUG00000004996	larp7	96	52.389	ENSACAG00000010662	LARP7	94	52.759	Anolis_carolinensis
ENSTRUG00000004996	larp7	96	42.308	ENSANAG00000022318	-	97	43.169	Aotus_nancymaae
ENSTRUG00000004996	larp7	96	50.090	ENSANAG00000031139	-	97	49.912	Aotus_nancymaae
ENSTRUG00000004996	larp7	97	65.129	ENSACLG00000023184	larp7	97	65.314	Astatotilapia_calliptera
ENSTRUG00000004996	larp7	99	56.295	ENSAMXG00000002549	larp7	98	57.014	Astyanax_mexicanus
ENSTRUG00000004996	larp7	96	50.995	ENSCJAG00000003711	LARP7	97	51.146	Callithrix_jacchus
ENSTRUG00000004996	larp7	96	51.259	ENSCAFG00000011715	LARP7	88	47.389	Canis_familiaris
ENSTRUG00000004996	larp7	95	49.902	ENSCHIG00000013971	-	96	48.718	Capra_hircus
ENSTRUG00000004996	larp7	96	50.883	ENSCHIG00000014163	-	97	50.356	Capra_hircus
ENSTRUG00000004996	larp7	89	50.192	ENSTSYG00000006769	-	98	49.153	Carlito_syrichta
ENSTRUG00000004996	larp7	96	46.409	ENSTSYG00000035188	-	70	65.193	Carlito_syrichta
ENSTRUG00000004996	larp7	96	46.097	ENSCAPG00000009328	LARP7	77	54.872	Cavia_aperea
ENSTRUG00000004996	larp7	96	52.302	ENSCPOG00000011830	LARP7	98	50.269	Cavia_porcellus
ENSTRUG00000004996	larp7	95	48.184	ENSCCAG00000023563	-	99	48.282	Cebus_capucinus
ENSTRUG00000004996	larp7	96	50.719	ENSCCAG00000026787	-	97	51.142	Cebus_capucinus
ENSTRUG00000004996	larp7	96	50.270	ENSCATG00000043535	LARP7	97	49.470	Cercocebus_atys
ENSTRUG00000004996	larp7	96	50.450	ENSCSAG00000003810	LARP7	97	49.647	Chlorocebus_sabaeus
ENSTRUG00000004996	larp7	93	43.178	ENSCHOG00000008967	-	70	62.275	Choloepus_hoffmanni
ENSTRUG00000004996	larp7	96	49.298	ENSCPBG00000004919	LARP7	99	52.422	Chrysemys_picta_bellii
ENSTRUG00000004996	larp7	96	50.540	ENSCANG00000031482	LARP7	96	50.088	Colobus_angolensis_palliatus
ENSTRUG00000004996	larp7	91	48.915	ENSCGRG00000007642	-	95	50.391	Cricetulus_griseus_crigri
ENSTRUG00000004996	larp7	91	47.893	ENSCGRG00000001141	-	65	73.118	Cricetulus_griseus_crigri
ENSTRUG00000004996	larp7	99	59.107	ENSCSEG00000009088	larp7	99	60.536	Cynoglossus_semilaevis
ENSTRUG00000004996	larp7	99	64.022	ENSCVAG00000016852	larp7	87	76.000	Cyprinodon_variegatus
ENSTRUG00000004996	larp7	99	55.083	ENSDARG00000017315	larp7	97	55.083	Danio_rerio
ENSTRUG00000004996	larp7	96	50.090	ENSDNOG00000013761	LARP7	97	49.561	Dasypus_novemcinctus
ENSTRUG00000004996	larp7	96	53.039	ENSDORG00000008896	-	98	50.780	Dipodomys_ordii
ENSTRUG00000004996	larp7	95	51.866	ENSETEG00000011692	LARP7	97	50.817	Echinops_telfairi
ENSTRUG00000004996	larp7	96	51.264	ENSEASG00005005592	LARP7	97	50.088	Equus_asinus_asinus
ENSTRUG00000004996	larp7	96	51.706	ENSECAG00000000834	LARP7	97	50.088	Equus_caballus
ENSTRUG00000004996	larp7	91	52.399	ENSEEUG00000012824	LARP7	97	53.119	Erinaceus_europaeus
ENSTRUG00000004996	larp7	96	58.834	ENSELUG00000015341	larp7	95	75.510	Esox_lucius
ENSTRUG00000004996	larp7	96	51.356	ENSFCAG00000031966	LARP7	97	52.050	Felis_catus
ENSTRUG00000004996	larp7	96	54.204	ENSFALG00000000972	LARP7	95	53.993	Ficedula_albicollis
ENSTRUG00000004996	larp7	96	47.794	ENSFDAG00000011855	-	97	46.824	Fukomys_damarensis
ENSTRUG00000004996	larp7	96	53.407	ENSFDAG00000014048	-	97	52.174	Fukomys_damarensis
ENSTRUG00000004996	larp7	98	63.586	ENSFHEG00000021652	larp7	97	63.031	Fundulus_heteroclitus
ENSTRUG00000004996	larp7	99	56.831	ENSGMOG00000010536	larp7	97	56.569	Gadus_morhua
ENSTRUG00000004996	larp7	99	61.455	ENSGAFG00000015400	larp7	98	61.818	Gambusia_affinis
ENSTRUG00000004996	larp7	99	63.700	ENSGACG00000019618	larp7	92	75.714	Gasterosteus_aculeatus
ENSTRUG00000004996	larp7	96	51.408	ENSGAGG00000024520	LARP7	97	52.069	Gopherus_agassizii
ENSTRUG00000004996	larp7	83	47.967	ENSGGOG00000006438	-	94	47.347	Gorilla_gorilla
ENSTRUG00000004996	larp7	96	50.180	ENSGGOG00000023567	-	97	49.559	Gorilla_gorilla
ENSTRUG00000004996	larp7	97	65.683	ENSHBUG00000019223	larp7	97	65.314	Haplochromis_burtoni
ENSTRUG00000004996	larp7	96	49.460	ENSHGLG00000002716	LARP7	97	49.378	Heterocephalus_glaber_female
ENSTRUG00000004996	larp7	96	49.460	ENSHGLG00100000332	LARP7	97	49.378	Heterocephalus_glaber_male
ENSTRUG00000004996	larp7	98	66.604	ENSHCOG00000000664	LARP7	97	65.854	Hippocampus_comes
ENSTRUG00000004996	larp7	98	55.536	ENSIPUG00000019886	larp7	96	55.000	Ictalurus_punctatus
ENSTRUG00000004996	larp7	96	52.072	ENSSTOG00000011789	LARP7	98	50.796	Ictidomys_tridecemlineatus
ENSTRUG00000004996	larp7	96	49.647	ENSJJAG00000000257	-	97	49.821	Jaculus_jaculus
ENSTRUG00000004996	larp7	98	62.825	ENSKMAG00000005057	larp7	97	63.011	Kryptolebias_marmoratus
ENSTRUG00000004996	larp7	99	61.458	ENSLBEG00000020062	larp7	100	62.326	Labrus_bergylta
ENSTRUG00000004996	larp7	99	46.780	ENSLACG00000013744	LARP7	97	46.780	Latimeria_chalumnae
ENSTRUG00000004996	larp7	96	52.441	ENSLAFG00000015769	LARP7	97	52.330	Loxodonta_africana
ENSTRUG00000004996	larp7	96	50.450	ENSMFAG00000036506	LARP7	97	49.647	Macaca_fascicularis
ENSTRUG00000004996	larp7	96	50.450	ENSMMUG00000017911	LARP7	97	49.647	Macaca_mulatta
ENSTRUG00000004996	larp7	96	50.450	ENSMNEG00000034758	LARP7	97	49.647	Macaca_nemestrina
ENSTRUG00000004996	larp7	96	50.450	ENSMLEG00000026154	LARP7	97	49.647	Mandrillus_leucophaeus
ENSTRUG00000004996	larp7	99	65.079	ENSMAMG00000005835	larp7	100	64.903	Mastacembelus_armatus
ENSTRUG00000004996	larp7	97	65.129	ENSMZEG00005002084	larp7	97	65.314	Maylandia_zebra
ENSTRUG00000004996	larp7	96	54.069	ENSMGAG00000010947	LARP7	98	53.076	Meleagris_gallopavo
ENSTRUG00000004996	larp7	95	44.549	ENSMAUG00000005625	-	96	46.568	Mesocricetus_auratus
ENSTRUG00000004996	larp7	96	50.633	ENSMICG00000031035	LARP7	97	50.178	Microcebus_murinus
ENSTRUG00000004996	larp7	95	52.477	ENSMOCG00000012519	-	97	52.527	Microtus_ochrogaster
ENSTRUG00000004996	larp7	89	48.810	ENSMOCG00000015761	-	100	48.810	Microtus_ochrogaster
ENSTRUG00000004996	larp7	95	50.275	MGP_CAROLIEiJ_G0025613	-	72	78.481	Mus_caroli
ENSTRUG00000004996	larp7	95	50.459	ENSMUSG00000027968	Larp7	79	77.778	Mus_musculus
ENSTRUG00000004996	larp7	95	51.287	MGP_PahariEiJ_G0027060	-	98	50.714	Mus_pahari
ENSTRUG00000004996	larp7	95	51.282	MGP_SPRETEiJ_G0026566	Larp7	72	79.747	Mus_spretus
ENSTRUG00000004996	larp7	95	52.390	ENSMPUG00000018052	-	100	53.565	Mustela_putorius_furo
ENSTRUG00000004996	larp7	96	50.987	ENSMPUG00000008331	-	97	50.088	Mustela_putorius_furo
ENSTRUG00000004996	larp7	85	51.098	ENSMLUG00000027214	LARP7	99	49.400	Myotis_lucifugus
ENSTRUG00000004996	larp7	96	49.819	ENSNGAG00000007368	-	98	50.176	Nannospalax_galili
ENSTRUG00000004996	larp7	96	50.450	ENSNLEG00000016354	LARP7	95	50.000	Nomascus_leucogenys
ENSTRUG00000004996	larp7	87	58.015	ENSOPRG00000009594	-	85	58.015	Ochotona_princeps
ENSTRUG00000004996	larp7	92	51.423	ENSODEG00000011121	LARP7	96	50.741	Octodon_degus
ENSTRUG00000004996	larp7	96	66.355	ENSONIG00000008763	larp7	100	65.062	Oreochromis_niloticus
ENSTRUG00000004996	larp7	96	51.858	ENSOANG00000009298	LARP7	97	52.249	Ornithorhynchus_anatinus
ENSTRUG00000004996	larp7	96	50.542	ENSOCUG00000007073	LARP7	98	49.472	Oryctolagus_cuniculus
ENSTRUG00000004996	larp7	96	63.127	ENSORLG00000004978	larp7	97	62.406	Oryzias_latipes
ENSTRUG00000004996	larp7	96	63.320	ENSORLG00020013825	larp7	97	62.477	Oryzias_latipes_hni
ENSTRUG00000004996	larp7	97	64.272	ENSOMEG00000006920	larp7	98	62.101	Oryzias_melastigma
ENSTRUG00000004996	larp7	96	50.000	ENSOGAG00000001643	LARP7	97	49.736	Otolemur_garnettii
ENSTRUG00000004996	larp7	96	50.899	ENSOARG00000001809	LARP7	97	49.912	Ovis_aries
ENSTRUG00000004996	larp7	96	50.450	ENSPPAG00000038420	LARP7	96	49.823	Pan_paniscus
ENSTRUG00000004996	larp7	96	51.264	ENSPPRG00000023256	LARP7	97	50.622	Panthera_pardus
ENSTRUG00000004996	larp7	92	51.128	ENSPTIG00000021146	LARP7	94	50.092	Panthera_tigris_altaica
ENSTRUG00000004996	larp7	96	50.360	ENSPTRG00000016380	LARP7	97	49.735	Pan_troglodytes
ENSTRUG00000004996	larp7	96	50.360	ENSPANG00000006701	LARP7	96	49.559	Papio_anubis
ENSTRUG00000004996	larp7	97	60.398	ENSPKIG00000023484	larp7	95	60.398	Paramormyrops_kingsleyae
ENSTRUG00000004996	larp7	97	51.394	ENSPSIG00000014419	LARP7	96	50.785	Pelodiscus_sinensis
ENSTRUG00000004996	larp7	95	50.356	ENSPEMG00000013978	-	97	50.532	Peromyscus_maniculatus_bairdii
ENSTRUG00000004996	larp7	96	51.413	ENSPCIG00000020284	LARP7	96	59.130	Phascolarctos_cinereus
ENSTRUG00000004996	larp7	98	62.338	ENSPFOG00000000265	larp7	97	62.709	Poecilia_formosa
ENSTRUG00000004996	larp7	98	62.523	ENSPLAG00000012181	larp7	97	62.894	Poecilia_latipinna
ENSTRUG00000004996	larp7	98	62.523	ENSPMEG00000007182	larp7	97	62.894	Poecilia_mexicana
ENSTRUG00000004996	larp7	98	62.477	ENSPREG00000019513	larp7	97	62.662	Poecilia_reticulata
ENSTRUG00000004996	larp7	96	50.180	ENSPPYG00000015010	LARP7	97	49.559	Pongo_abelii
ENSTRUG00000004996	larp7	77	73.469	ENSPCOG00000023946	LARP7	97	45.524	Propithecus_coquereli
ENSTRUG00000004996	larp7	97	51.878	ENSPVAG00000000282	LARP7	97	50.709	Pteropus_vampyrus
ENSTRUG00000004996	larp7	96	59.963	ENSPNAG00000017554	larp7	99	56.991	Pygocentrus_nattereri
ENSTRUG00000004996	larp7	95	49.725	ENSRNOG00000048989	Larp7	68	73.118	Rattus_norvegicus
ENSTRUG00000004996	larp7	82	47.146	ENSRBIG00000031916	LARP7	96	48.478	Rhinopithecus_bieti
ENSTRUG00000004996	larp7	96	51.532	ENSRROG00000033414	LARP7	97	50.528	Rhinopithecus_roxellana
ENSTRUG00000004996	larp7	96	50.719	ENSSBOG00000030886	-	97	50.967	Saimiri_boliviensis_boliviensis
ENSTRUG00000004996	larp7	96	41.683	ENSSBOG00000022652	-	98	39.852	Saimiri_boliviensis_boliviensis
ENSTRUG00000004996	larp7	99	59.358	ENSSFOG00015019344	larp7	97	58.123	Scleropages_formosus
ENSTRUG00000004996	larp7	96	67.225	ENSSMAG00000011296	larp7	98	66.062	Scophthalmus_maximus
ENSTRUG00000004996	larp7	99	67.387	ENSSDUG00000007045	larp7	98	66.667	Seriola_dumerili
ENSTRUG00000004996	larp7	99	66.966	ENSSPAG00000016066	larp7	98	66.786	Stegastes_partitus
ENSTRUG00000004996	larp7	96	49.195	ENSSSCG00000009119	LARP7	97	49.912	Sus_scrofa
ENSTRUG00000004996	larp7	96	52.698	ENSTGUG00000001804	LARP7	98	52.982	Taeniopygia_guttata
ENSTRUG00000004996	larp7	99	70.902	ENSTNIG00000007183	larp7	99	70.534	Tetraodon_nigroviridis
ENSTRUG00000004996	larp7	95	50.271	ENSTBEG00000009188	LARP7	96	49.117	Tupaia_belangeri
ENSTRUG00000004996	larp7	96	51.079	ENSUAMG00000000836	LARP7	97	51.056	Ursus_americanus
ENSTRUG00000004996	larp7	96	50.000	ENSUMAG00000002263	LARP7	98	50.000	Ursus_maritimus
ENSTRUG00000004996	larp7	96	50.542	ENSVPAG00000010502	LARP7	97	50.265	Vicugna_pacos
ENSTRUG00000004996	larp7	98	54.828	ENSXETG00000024097	larp7	97	54.483	Xenopus_tropicalis
ENSTRUG00000004996	larp7	98	62.949	ENSXCOG00000004883	larp7	93	73.529	Xiphophorus_couchianus
ENSTRUG00000004996	larp7	98	62.107	ENSXMAG00000008479	larp7	97	63.031	Xiphophorus_maculatus