EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTRUG00000005049 (Gene tree)
Gene ID: 101072019
Gene Symbol: YTHDF1 (1 of many)
Alias: C20orf21|FLJ20391
Full Name: YTH domain-containing family protein 1-like
Gene Type: protein_coding
Species: Takifugu_rubripes
Status: putative
Strand: Plus strand
Length: 3062 bases
Position: chr3:9194249-9197310
Accession: 101072019
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTRUP00000012115	YTH	PF04146.15	5e-41	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTRUT00000012175	YTHDF1 (1 of many)-201	1804	XM_003963368	ENSTRUP00000012115	601 (aa)	XP_003963417	H2SI83

Gene Model

Click here to download ENSTRUG00000005049's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTRUG00000005049's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTRUG00000005049	YTHDF1	99	60.032	ENSTRUG00000007870	ythdf3	97	59.539
ENSTRUG00000005049	YTHDF1	98	58.560	ENSTRUG00000011923	ythdf2	94	57.098
ENSTRUG00000005049	YTHDF1	97	76.560	ENSTRUG00000004288	ythdf1	97	76.119

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTRUG00000005049	YTHDF1	98	70.924	ENSG00000149658	YTHDF1	96	70.051	Homo_sapiens
ENSTRUG00000005049	YTHDF1	97	77.419	ENSAPOG00000004358	ythdf1	96	75.712	Acanthochromis_polyacanthus
ENSTRUG00000005049	YTHDF1	99	91.681	ENSAPOG00000010796	YTHDF1	94	91.624	Acanthochromis_polyacanthus
ENSTRUG00000005049	YTHDF1	97	72.156	ENSACIG00000020083	YTHDF1	96	83.419	Amphilophus_citrinellus
ENSTRUG00000005049	YTHDF1	97	72.483	ENSACIG00000011264	ythdf1	96	73.790	Amphilophus_citrinellus
ENSTRUG00000005049	YTHDF1	97	77.052	ENSAOCG00000022251	ythdf1	97	76.061	Amphiprion_ocellaris
ENSTRUG00000005049	YTHDF1	99	92.013	ENSAOCG00000012567	YTHDF1	94	91.624	Amphiprion_ocellaris
ENSTRUG00000005049	YTHDF1	97	77.052	ENSAPEG00000021878	ythdf1	95	75.041	Amphiprion_percula
ENSTRUG00000005049	YTHDF1	99	92.180	ENSAPEG00000008750	YTHDF1	94	91.795	Amphiprion_percula
ENSTRUG00000005049	YTHDF1	99	91.514	ENSATEG00000005996	YTHDF1	94	91.624	Anabas_testudineus
ENSTRUG00000005049	YTHDF1	97	76.717	ENSATEG00000023840	ythdf1	97	75.722	Anabas_testudineus
ENSTRUG00000005049	YTHDF1	98	72.850	ENSACAG00000005560	YTHDF1	96	72.496	Anolis_carolinensis
ENSTRUG00000005049	YTHDF1	99	58.833	ENSANAG00000021022	-	96	59.253	Aotus_nancymaae
ENSTRUG00000005049	YTHDF1	98	70.658	ENSANAG00000034786	-	96	69.949	Aotus_nancymaae
ENSTRUG00000005049	YTHDF1	99	90.017	ENSACLG00000025518	YTHDF1	94	90.598	Astatotilapia_calliptera
ENSTRUG00000005049	YTHDF1	97	70.289	ENSBTAG00000010383	YTHDF1	96	70.339	Bos_taurus
ENSTRUG00000005049	YTHDF1	98	70.320	ENSCJAG00000010056	YTHDF1	96	68.948	Callithrix_jacchus
ENSTRUG00000005049	YTHDF1	97	69.779	ENSCHIG00000026494	YTHDF1	96	68.060	Capra_hircus
ENSTRUG00000005049	YTHDF1	98	68.930	ENSTSYG00000033436	YTHDF1	96	68.983	Carlito_syrichta
ENSTRUG00000005049	YTHDF1	98	70.995	ENSCATG00000033272	YTHDF1	96	70.370	Cercocebus_atys
ENSTRUG00000005049	YTHDF1	98	70.995	ENSCLAG00000005989	YTHDF1	96	70.826	Chinchilla_lanigera
ENSTRUG00000005049	YTHDF1	98	70.995	ENSCSAG00000016266	YTHDF1	96	70.370	Chlorocebus_sabaeus
ENSTRUG00000005049	YTHDF1	98	72.896	ENSCPBG00000027183	YTHDF1	96	71.574	Chrysemys_picta_bellii
ENSTRUG00000005049	YTHDF1	97	70.940	ENSCANG00000029082	YTHDF1	95	70.307	Colobus_angolensis_palliatus
ENSTRUG00000005049	YTHDF1	99	71.048	ENSCGRG00001016568	Ythdf1	96	71.186	Cricetulus_griseus_chok1gshd
ENSTRUG00000005049	YTHDF1	96	70.548	ENSCGRG00000009207	Ythdf1	96	71.084	Cricetulus_griseus_crigri
ENSTRUG00000005049	YTHDF1	97	75.891	ENSCSEG00000020623	YTHDF1	97	75.296	Cynoglossus_semilaevis
ENSTRUG00000005049	YTHDF1	99	74.551	ENSCVAG00000017940	ythdf1	95	74.747	Cyprinodon_variegatus
ENSTRUG00000005049	YTHDF1	99	89.684	ENSCVAG00000014378	YTHDF1	94	91.795	Cyprinodon_variegatus
ENSTRUG00000005049	YTHDF1	99	79.470	ENSDARG00000016447	ythdf1	94	80.301	Danio_rerio
ENSTRUG00000005049	YTHDF1	98	71.912	ENSDNOG00000043590	YTHDF1	96	71.838	Dasypus_novemcinctus
ENSTRUG00000005049	YTHDF1	83	55.172	ENSETEG00000017860	-	97	55.172	Echinops_telfairi
ENSTRUG00000005049	YTHDF1	90	69.557	ENSECAG00000019475	YTHDF1	96	70.370	Equus_caballus
ENSTRUG00000005049	YTHDF1	91	69.945	ENSEEUG00000007461	YTHDF1	96	69.597	Erinaceus_europaeus
ENSTRUG00000005049	YTHDF1	99	77.653	ENSELUG00000022768	ythdf1	96	76.151	Esox_lucius
ENSTRUG00000005049	YTHDF1	100	79.683	ENSELUG00000001906	YTHDF1	96	79.024	Esox_lucius
ENSTRUG00000005049	YTHDF1	98	72.344	ENSFALG00000010463	YTHDF1	96	71.212	Ficedula_albicollis
ENSTRUG00000005049	YTHDF1	98	70.439	ENSFDAG00000019602	YTHDF1	96	70.946	Fukomys_damarensis
ENSTRUG00000005049	YTHDF1	99	91.181	ENSFHEG00000002540	YTHDF1	94	91.282	Fundulus_heteroclitus
ENSTRUG00000005049	YTHDF1	99	75.286	ENSFHEG00000023218	ythdf1	97	74.363	Fundulus_heteroclitus
ENSTRUG00000005049	YTHDF1	89	92.929	ENSGMOG00000019610	ythdf1	84	93.684	Gadus_morhua
ENSTRUG00000005049	YTHDF1	99	91.847	ENSGAFG00000021100	YTHDF1	97	91.795	Gambusia_affinis
ENSTRUG00000005049	YTHDF1	98	87.960	ENSGACG00000002613	YTHDF1	96	89.022	Gasterosteus_aculeatus
ENSTRUG00000005049	YTHDF1	97	76.351	ENSGACG00000012014	ythdf1	94	74.709	Gasterosteus_aculeatus
ENSTRUG00000005049	YTHDF1	98	73.401	ENSGAGG00000003007	YTHDF1	96	72.466	Gopherus_agassizii
ENSTRUG00000005049	YTHDF1	98	71.524	ENSGGOG00000008340	YTHDF1	96	70.220	Gorilla_gorilla
ENSTRUG00000005049	YTHDF1	97	76.549	ENSHBUG00000011284	ythdf1	97	74.007	Haplochromis_burtoni
ENSTRUG00000005049	YTHDF1	99	90.516	ENSHBUG00000004875	YTHDF1	94	91.111	Haplochromis_burtoni
ENSTRUG00000005049	YTHDF1	98	70.489	ENSHGLG00000006585	YTHDF1	96	70.608	Heterocephalus_glaber_female
ENSTRUG00000005049	YTHDF1	98	70.489	ENSHGLG00100004683	YTHDF1	96	70.608	Heterocephalus_glaber_male
ENSTRUG00000005049	YTHDF1	99	86.522	ENSHCOG00000011303	YTHDF1	94	87.350	Hippocampus_comes
ENSTRUG00000005049	YTHDF1	99	74.426	ENSHCOG00000008866	ythdf1	97	74.664	Hippocampus_comes
ENSTRUG00000005049	YTHDF1	99	76.847	ENSIPUG00000000425	Ythdf1	94	77.629	Ictalurus_punctatus
ENSTRUG00000005049	YTHDF1	97	71.282	ENSJJAG00000013589	Ythdf1	96	70.339	Jaculus_jaculus
ENSTRUG00000005049	YTHDF1	97	75.920	ENSKMAG00000005595	ythdf1	97	75.000	Kryptolebias_marmoratus
ENSTRUG00000005049	YTHDF1	99	90.199	ENSKMAG00000017472	YTHDF1	94	90.785	Kryptolebias_marmoratus
ENSTRUG00000005049	YTHDF1	97	74.790	ENSLBEG00000014105	ythdf1	95	76.000	Labrus_bergylta
ENSTRUG00000005049	YTHDF1	100	90.532	ENSLBEG00000012068	YTHDF1	94	90.427	Labrus_bergylta
ENSTRUG00000005049	YTHDF1	97	71.453	ENSLACG00000014195	YTHDF1	95	71.454	Latimeria_chalumnae
ENSTRUG00000005049	YTHDF1	100	76.490	ENSLOCG00000005020	ythdf1	97	75.828	Lepisosteus_oculatus
ENSTRUG00000005049	YTHDF1	98	72.391	ENSLAFG00000008884	YTHDF1	96	71.356	Loxodonta_africana
ENSTRUG00000005049	YTHDF1	98	70.995	ENSMFAG00000042868	YTHDF1	96	70.370	Macaca_fascicularis
ENSTRUG00000005049	YTHDF1	98	70.995	ENSMMUG00000009227	YTHDF1	96	70.370	Macaca_mulatta
ENSTRUG00000005049	YTHDF1	98	70.995	ENSMNEG00000030851	YTHDF1	96	70.370	Macaca_nemestrina
ENSTRUG00000005049	YTHDF1	98	71.332	ENSMLEG00000009252	YTHDF1	96	70.427	Mandrillus_leucophaeus
ENSTRUG00000005049	YTHDF1	97	75.083	ENSMAMG00000024255	ythdf1	96	73.322	Mastacembelus_armatus
ENSTRUG00000005049	YTHDF1	99	91.847	ENSMAMG00000011072	YTHDF1	94	91.966	Mastacembelus_armatus
ENSTRUG00000005049	YTHDF1	97	76.549	ENSMZEG00005026397	ythdf1	97	74.958	Maylandia_zebra
ENSTRUG00000005049	YTHDF1	99	90.516	ENSMZEG00005023596	YTHDF1	94	91.111	Maylandia_zebra
ENSTRUG00000005049	YTHDF1	98	70.658	ENSMAUG00000017660	Ythdf1	96	71.186	Mesocricetus_auratus
ENSTRUG00000005049	YTHDF1	98	70.489	ENSMICG00000032266	YTHDF1	96	70.051	Microcebus_murinus
ENSTRUG00000005049	YTHDF1	98	70.826	ENSMOCG00000013573	Ythdf1	96	70.777	Microtus_ochrogaster
ENSTRUG00000005049	YTHDF1	97	75.379	ENSMMOG00000017500	ythdf1	95	75.211	Mola_mola
ENSTRUG00000005049	YTHDF1	100	89.037	ENSMMOG00000020467	YTHDF1	94	89.231	Mola_mola
ENSTRUG00000005049	YTHDF1	90	71.324	ENSMODG00000016842	YTHDF1	96	71.481	Monodelphis_domestica
ENSTRUG00000005049	YTHDF1	97	76.570	ENSMALG00000015672	ythdf1	95	75.377	Monopterus_albus
ENSTRUG00000005049	YTHDF1	99	88.889	ENSMALG00000022209	YTHDF1	94	89.608	Monopterus_albus
ENSTRUG00000005049	YTHDF1	98	70.489	MGP_CAROLIEiJ_G0024790	Ythdf1	96	71.017	Mus_caroli
ENSTRUG00000005049	YTHDF1	98	70.489	ENSMUSG00000038848	Ythdf1	96	71.017	Mus_musculus
ENSTRUG00000005049	YTHDF1	98	70.489	MGP_PahariEiJ_G0026237	Ythdf1	96	71.017	Mus_pahari
ENSTRUG00000005049	YTHDF1	98	70.489	MGP_SPRETEiJ_G0025715	Ythdf1	96	71.017	Mus_spretus
ENSTRUG00000005049	YTHDF1	96	71.355	ENSMLUG00000002241	YTHDF1	93	69.965	Myotis_lucifugus
ENSTRUG00000005049	YTHDF1	98	71.332	ENSNGAG00000000334	Ythdf1	96	71.525	Nannospalax_galili
ENSTRUG00000005049	YTHDF1	97	76.214	ENSNBRG00000008213	ythdf1	94	83.404	Neolamprologus_brichardi
ENSTRUG00000005049	YTHDF1	97	91.282	ENSNBRG00000015321	YTHDF1	97	91.111	Neolamprologus_brichardi
ENSTRUG00000005049	YTHDF1	96	65.060	ENSOPRG00000001758	-	98	63.937	Ochotona_princeps
ENSTRUG00000005049	YTHDF1	85	78.475	ENSODEG00000000074	-	95	59.933	Octodon_degus
ENSTRUG00000005049	YTHDF1	97	75.926	ENSONIG00000016799	ythdf1	97	75.585	Oreochromis_niloticus
ENSTRUG00000005049	YTHDF1	98	72.391	ENSOANG00000003723	YTHDF1	96	71.886	Ornithorhynchus_anatinus
ENSTRUG00000005049	YTHDF1	77	85.405	ENSOCUG00000012780	YTHDF1	96	65.254	Oryctolagus_cuniculus
ENSTRUG00000005049	YTHDF1	100	88.372	ENSORLG00000009739	YTHDF1	94	89.060	Oryzias_latipes
ENSTRUG00000005049	YTHDF1	97	75.671	ENSORLG00000014665	YTHDF1	95	73.841	Oryzias_latipes
ENSTRUG00000005049	YTHDF1	100	87.894	ENSORLG00020001332	YTHDF1	94	88.718	Oryzias_latipes_hni
ENSTRUG00000005049	YTHDF1	97	76.134	ENSORLG00020000307	ythdf1	95	74.295	Oryzias_latipes_hni
ENSTRUG00000005049	YTHDF1	97	75.966	ENSORLG00015006302	ythdf1	95	74.129	Oryzias_latipes_hsok
ENSTRUG00000005049	YTHDF1	100	88.040	ENSORLG00015018321	YTHDF1	97	88.718	Oryzias_latipes_hsok
ENSTRUG00000005049	YTHDF1	97	76.000	ENSOMEG00000002941	YTHDF1	97	73.187	Oryzias_melastigma
ENSTRUG00000005049	YTHDF1	100	88.538	ENSOMEG00000011843	YTHDF1	94	89.060	Oryzias_melastigma
ENSTRUG00000005049	YTHDF1	98	70.489	ENSOGAG00000000480	YTHDF1	96	69.514	Otolemur_garnettii
ENSTRUG00000005049	YTHDF1	96	67.470	ENSOARG00000011639	YTHDF1	94	66.553	Ovis_aries
ENSTRUG00000005049	YTHDF1	98	71.524	ENSPPAG00000023277	YTHDF1	96	70.326	Pan_paniscus
ENSTRUG00000005049	YTHDF1	79	79.825	ENSPTIG00000017355	YTHDF1	93	78.696	Panthera_tigris_altaica
ENSTRUG00000005049	YTHDF1	98	71.524	ENSPTRG00000013730	YTHDF1	96	70.220	Pan_troglodytes
ENSTRUG00000005049	YTHDF1	98	70.995	ENSPANG00000021472	YTHDF1	96	70.370	Papio_anubis
ENSTRUG00000005049	YTHDF1	100	73.588	ENSPKIG00000005026	YTHDF1	96	73.424	Paramormyrops_kingsleyae
ENSTRUG00000005049	YTHDF1	99	70.715	ENSPSIG00000005529	YTHDF1	96	71.066	Pelodiscus_sinensis
ENSTRUG00000005049	YTHDF1	94	76.132	ENSPMGG00000015328	ythdf1	95	77.352	Periophthalmus_magnuspinnatus
ENSTRUG00000005049	YTHDF1	95	87.741	ENSPMGG00000009101	YTHDF1	96	89.492	Periophthalmus_magnuspinnatus
ENSTRUG00000005049	YTHDF1	97	70.769	ENSPEMG00000020199	Ythdf1	96	71.329	Peromyscus_maniculatus_bairdii
ENSTRUG00000005049	YTHDF1	99	73.256	ENSPCIG00000017170	YTHDF1	96	72.037	Phascolarctos_cinereus
ENSTRUG00000005049	YTHDF1	99	76.307	ENSPFOG00000005405	ythdf1	95	76.342	Poecilia_formosa
ENSTRUG00000005049	YTHDF1	99	92.013	ENSPLAG00000006298	YTHDF1	94	91.966	Poecilia_latipinna
ENSTRUG00000005049	YTHDF1	99	76.307	ENSPLAG00000006653	ythdf1	97	75.593	Poecilia_latipinna
ENSTRUG00000005049	YTHDF1	99	92.180	ENSPMEG00000020969	-	94	92.137	Poecilia_mexicana
ENSTRUG00000005049	YTHDF1	99	76.026	ENSPMEG00000023753	ythdf1	97	76.807	Poecilia_mexicana
ENSTRUG00000005049	YTHDF1	97	91.952	ENSPREG00000017662	YTHDF1	92	91.725	Poecilia_reticulata
ENSTRUG00000005049	YTHDF1	99	76.694	ENSPREG00000002173	ythdf1	97	76.897	Poecilia_reticulata
ENSTRUG00000005049	YTHDF1	79	86.154	ENSPPYG00000011226	YTHDF1	96	85.864	Pongo_abelii
ENSTRUG00000005049	YTHDF1	90	68.624	ENSPCAG00000002452	YTHDF1	98	68.315	Procavia_capensis
ENSTRUG00000005049	YTHDF1	98	70.995	ENSPCOG00000025969	YTHDF1	96	70.558	Propithecus_coquereli
ENSTRUG00000005049	YTHDF1	99	58.224	ENSPVAG00000017568	YTHDF1	97	65.034	Pteropus_vampyrus
ENSTRUG00000005049	YTHDF1	97	76.549	ENSPNYG00000014007	ythdf1	97	74.958	Pundamilia_nyererei
ENSTRUG00000005049	YTHDF1	99	90.516	ENSPNYG00000002266	YTHDF1	94	91.111	Pundamilia_nyererei
ENSTRUG00000005049	YTHDF1	99	77.649	ENSPNAG00000012447	ythdf1	94	80.737	Pygocentrus_nattereri
ENSTRUG00000005049	YTHDF1	98	70.489	ENSRNOG00000027015	Ythdf1	96	70.847	Rattus_norvegicus
ENSTRUG00000005049	YTHDF1	98	69.815	ENSRBIG00000044959	YTHDF1	96	68.739	Rhinopithecus_bieti
ENSTRUG00000005049	YTHDF1	98	69.815	ENSRROG00000033014	YTHDF1	96	68.739	Rhinopithecus_roxellana
ENSTRUG00000005049	YTHDF1	95	69.031	ENSSBOG00000027278	YTHDF1	96	68.275	Saimiri_boliviensis_boliviensis
ENSTRUG00000005049	YTHDF1	97	71.356	ENSSHAG00000010430	YTHDF1	86	71.502	Sarcophilus_harrisii
ENSTRUG00000005049	YTHDF1	99	76.884	ENSSFOG00015000284	ythdf1	97	74.711	Scleropages_formosus
ENSTRUG00000005049	YTHDF1	100	85.382	ENSSMAG00000007635	YTHDF1	95	85.000	Scophthalmus_maximus
ENSTRUG00000005049	YTHDF1	68	91.083	ENSSMAG00000013715	ythdf1	91	85.000	Scophthalmus_maximus
ENSTRUG00000005049	YTHDF1	99	88.961	ENSSDUG00000015823	YTHDF1	94	88.000	Seriola_dumerili
ENSTRUG00000005049	YTHDF1	97	77.589	ENSSDUG00000000435	ythdf1	95	76.744	Seriola_dumerili
ENSTRUG00000005049	YTHDF1	97	77.387	ENSSLDG00000024948	ythdf1	95	76.783	Seriola_lalandi_dorsalis
ENSTRUG00000005049	YTHDF1	99	89.836	ENSSLDG00000001054	YTHDF1	94	93.467	Seriola_lalandi_dorsalis
ENSTRUG00000005049	YTHDF1	97	77.311	ENSSPAG00000014989	ythdf1	95	77.311	Stegastes_partitus
ENSTRUG00000005049	YTHDF1	99	91.847	ENSSPAG00000003666	YTHDF1	94	91.966	Stegastes_partitus
ENSTRUG00000005049	YTHDF1	97	86.301	ENSTNIG00000003975	YTHDF1	96	86.130	Tetraodon_nigroviridis
ENSTRUG00000005049	YTHDF1	97	73.435	ENSTNIG00000012490	ythdf1	96	73.684	Tetraodon_nigroviridis
ENSTRUG00000005049	YTHDF1	99	71.927	ENSXETG00000027086	ythdf1	95	71.918	Xenopus_tropicalis
ENSTRUG00000005049	YTHDF1	97	76.672	ENSXCOG00000002490	ythdf1	92	77.018	Xiphophorus_couchianus
ENSTRUG00000005049	YTHDF1	98	91.312	ENSXCOG00000008115	YTHDF1	94	91.243	Xiphophorus_couchianus
ENSTRUG00000005049	YTHDF1	99	92.013	ENSXMAG00000015644	YTHDF1	94	91.966	Xiphophorus_maculatus
ENSTRUG00000005049	YTHDF1	99	76.190	ENSXMAG00000008525	ythdf1	95	76.728	Xiphophorus_maculatus