EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTRUG00000005176 (Gene tree)
Gene ID: 101076187
Gene Symbol: e4f1
Alias: zgc:114190
Full Name: E4F transcription factor 1
Gene Type: protein_coding
Species: Takifugu_rubripes
Status: putative
Strand: Plus strand
Length: 4863 bases
Position: chr5:6258537-6263399
Accession: 101076187
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTRUP00000012405	zf-C2H2	PF00096.26	5.1e-26	1	4
ENSTRUP00000012405	zf-C2H2	PF00096.26	5.1e-26	2	4
ENSTRUP00000012405	zf-C2H2	PF00096.26	5.1e-26	3	4
ENSTRUP00000012405	zf-C2H2	PF00096.26	5.1e-26	4	4
ENSTRUP00000012405	zf-met	PF12874.7	0.00035	1	1
ENSTRUP00000012405	zf-C2H2_jaz	PF12171.8	1.1e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTRUT00000012465	-	2994	XM_011603871	ENSTRUP00000012405	793 (aa)	XP_011602173	H2SJ22

Gene Model

Click here to download ENSTRUG00000005176's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTRUG00000005176's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTRUG00000005176	e4f1	55	40.719	ENSTRUG00000019483	-	93	43.243
ENSTRUG00000005176	e4f1	58	39.877	ENSTRUG00000003277	zbtb17	93	55.000
ENSTRUG00000005176	e4f1	77	37.778	ENSTRUG00000025881	-	71	37.975
ENSTRUG00000005176	e4f1	64	42.500	ENSTRUG00000015687	-	92	44.286
ENSTRUG00000005176	e4f1	58	38.843	ENSTRUG00000025597	znf646	56	38.843
ENSTRUG00000005176	e4f1	73	46.914	ENSTRUG00000017456	znf236	65	46.914
ENSTRUG00000005176	e4f1	52	36.036	ENSTRUG00000012157	-	87	36.036
ENSTRUG00000005176	e4f1	61	42.424	ENSTRUG00000013906	-	95	42.424

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTRUG00000005176	e4f1	100	67.619	ENSCSEG00000015852	e4f1	88	75.351	Cynoglossus_semilaevis
ENSTRUG00000005176	e4f1	100	69.521	ENSCVAG00000002788	e4f1	100	68.892	Cyprinodon_variegatus
ENSTRUG00000005176	e4f1	99	69.059	ENSFHEG00000022551	e4f1	97	68.889	Fundulus_heteroclitus
ENSTRUG00000005176	e4f1	89	69.355	ENSGMOG00000011409	e4f1	100	69.355	Gadus_morhua
ENSTRUG00000005176	e4f1	100	70.403	ENSGACG00000011808	e4f1	100	71.411	Gasterosteus_aculeatus
ENSTRUG00000005176	e4f1	100	65.668	ENSHCOG00000016455	e4f1	100	64.000	Hippocampus_comes
ENSTRUG00000005176	e4f1	100	49.624	ENSIPUG00000005379	e4f1	99	50.063	Ictalurus_punctatus
ENSTRUG00000005176	e4f1	100	74.028	ENSLBEG00000026373	e4f1	100	73.149	Labrus_bergylta
ENSTRUG00000005176	e4f1	100	70.063	ENSMMOG00000007612	e4f1	100	70.063	Mola_mola
ENSTRUG00000005176	e4f1	100	72.796	ENSMALG00000007314	e4f1	100	71.375	Monopterus_albus
ENSTRUG00000005176	e4f1	100	69.861	ENSORLG00000009160	e4f1	100	68.348	Oryzias_latipes
ENSTRUG00000005176	e4f1	100	68.010	ENSORLG00020017974	e4f1	100	66.789	Oryzias_latipes_hni
ENSTRUG00000005176	e4f1	100	70.366	ENSORLG00015007385	e4f1	100	69.105	Oryzias_latipes_hsok
ENSTRUG00000005176	e4f1	100	70.477	ENSOMEG00000012220	e4f1	100	68.931	Oryzias_melastigma
ENSTRUG00000005176	e4f1	100	56.234	ENSPKIG00000001942	e4f1	99	55.915	Paramormyrops_kingsleyae
ENSTRUG00000005176	e4f1	91	82.000	ENSPMGG00000020527	e4f1	99	80.374	Periophthalmus_magnuspinnatus
ENSTRUG00000005176	e4f1	99	49.937	ENSSFOG00015021291	e4f1	98	58.209	Scleropages_formosus
ENSTRUG00000005176	e4f1	100	75.567	ENSSMAG00000014720	e4f1	100	73.897	Scophthalmus_maximus
ENSTRUG00000005176	e4f1	97	45.833	ENSSPUG00000011420	E4F1	95	45.625	Sphenodon_punctatus
ENSTRUG00000005176	e4f1	96	81.467	ENSTNIG00000018001	e4f1	100	83.784	Tetraodon_nigroviridis
ENSTRUG00000005176	e4f1	81	64.516	ENSXETG00000016091	e4f1	99	67.257	Xenopus_tropicalis