EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTRUG00000005218 (Gene tree)
Gene ID: 101078008
Gene Symbol: fscn1a
Alias: fscn1|sb:cb589|zgc:153632
Full Name: fascin actin-bundling protein 1
Gene Type: protein_coding
Species: Takifugu_rubripes
Status: putative
Strand: Plus strand
Length: 8318 bases
Position: chr5:3555727-3564044
Accession: 101078008
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTRUP00000012534	FRG1	PF06229.12	7.9e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTRUT00000012594	-	1467	XM_003964438	ENSTRUP00000012534	488 (aa)	XP_003964487	H2SJF1

Gene Model

Click here to download ENSTRUG00000005218's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTRUG00000005218's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTRUG00000005218	fscn1a	99	50.407	ENSTRUG00000011674	fscn2a	99	50.407

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTRUG00000005218	fscn1a	100	51.205	ENSACIG00000002025	fscn2b	100	51.205	Amphilophus_citrinellus
ENSTRUG00000005218	fscn1a	97	51.340	ENSATEG00000013607	fscn2b	98	51.340	Anabas_testudineus
ENSTRUG00000005218	fscn1a	59	65.138	ENSATEG00000005335	fscn1b	100	65.138	Anabas_testudineus
ENSTRUG00000005218	fscn1a	99	53.862	ENSACAG00000015216	FSCN2	99	53.862	Anolis_carolinensis
ENSTRUG00000005218	fscn1a	100	51.004	ENSACLG00000014453	fscn2b	100	51.004	Astatotilapia_calliptera
ENSTRUG00000005218	fscn1a	100	90.964	ENSCSEG00000019160	fscn1a	100	90.964	Cynoglossus_semilaevis
ENSTRUG00000005218	fscn1a	90	48.667	ENSCVAG00000018645	fscn2b	100	48.667	Cyprinodon_variegatus
ENSTRUG00000005218	fscn1a	99	43.359	ENSEBUG00000014215	FSCN2	99	43.359	Eptatretus_burgeri
ENSTRUG00000005218	fscn1a	99	83.910	ENSELUG00000011363	fscn1a	99	83.910	Esox_lucius
ENSTRUG00000005218	fscn1a	76	57.453	ENSFALG00000012651	FSCN2	99	49.170	Ficedula_albicollis
ENSTRUG00000005218	fscn1a	99	53.659	ENSGALG00000023354	FSCN2	99	53.659	Gallus_gallus
ENSTRUG00000005218	fscn1a	100	69.940	ENSGAFG00000013512	fscn1b	100	69.940	Gambusia_affinis
ENSTRUG00000005218	fscn1a	100	51.004	ENSHBUG00000021952	fscn2b	100	51.004	Haplochromis_burtoni
ENSTRUG00000005218	fscn1a	99	52.033	ENSHCOG00000015421	fscn2a	99	52.033	Hippocampus_comes
ENSTRUG00000005218	fscn1a	99	73.577	ENSLACG00000016447	FSCN1	99	73.577	Latimeria_chalumnae
ENSTRUG00000005218	fscn1a	99	77.621	ENSLOCG00000004693	fscn1a	98	77.621	Lepisosteus_oculatus
ENSTRUG00000005218	fscn1a	100	51.004	ENSMZEG00005009107	fscn2b	100	51.004	Maylandia_zebra
ENSTRUG00000005218	fscn1a	100	50.803	ENSNBRG00000021249	fscn2b	100	50.803	Neolamprologus_brichardi
ENSTRUG00000005218	fscn1a	100	51.406	ENSONIG00000019860	fscn2b	100	51.406	Oreochromis_niloticus
ENSTRUG00000005218	fscn1a	100	68.737	ENSORLG00000009620	fscn1b	100	68.737	Oryzias_latipes
ENSTRUG00000005218	fscn1a	100	68.337	ENSORLG00020010658	fscn1b	100	68.337	Oryzias_latipes_hni
ENSTRUG00000005218	fscn1a	100	68.938	ENSORLG00015010020	fscn1b	100	68.938	Oryzias_latipes_hsok
ENSTRUG00000005218	fscn1a	99	69.028	ENSOMEG00000019920	fscn1b	99	69.028	Oryzias_melastigma
ENSTRUG00000005218	fscn1a	99	52.033	ENSOMEG00000008432	fscn2a	99	52.033	Oryzias_melastigma
ENSTRUG00000005218	fscn1a	99	72.154	ENSPKIG00000010464	fscn1a	99	72.154	Paramormyrops_kingsleyae
ENSTRUG00000005218	fscn1a	99	52.546	ENSPKIG00000013426	fscn2b	99	52.546	Paramormyrops_kingsleyae
ENSTRUG00000005218	fscn1a	100	69.539	ENSPFOG00000011521	fscn1b	100	69.539	Poecilia_formosa
ENSTRUG00000005218	fscn1a	100	69.138	ENSPLAG00000006140	fscn1b	100	69.138	Poecilia_latipinna
ENSTRUG00000005218	fscn1a	100	69.339	ENSPMEG00000019975	fscn1b	100	69.339	Poecilia_mexicana
ENSTRUG00000005218	fscn1a	100	51.004	ENSPNYG00000019474	fscn2b	100	51.004	Pundamilia_nyererei
ENSTRUG00000005218	fscn1a	99	59.155	ENSPNAG00000014780	fscn1b	99	59.918	Pygocentrus_nattereri
ENSTRUG00000005218	fscn1a	99	55.081	ENSSPUG00000014373	FSCN2	99	55.081	Sphenodon_punctatus
ENSTRUG00000005218	fscn1a	99	73.931	ENSSPUG00000002887	FSCN1	99	73.931	Sphenodon_punctatus
ENSTRUG00000005218	fscn1a	61	57.718	ENSTGUG00000014701	FSCN2	97	57.718	Taeniopygia_guttata
ENSTRUG00000005218	fscn1a	99	50.000	ENSTNIG00000009778	fscn2a	98	50.000	Tetraodon_nigroviridis
ENSTRUG00000005218	fscn1a	100	69.138	ENSXCOG00000005719	fscn1b	100	69.138	Xiphophorus_couchianus
ENSTRUG00000005218	fscn1a	100	68.938	ENSXMAG00000012851	fscn1b	100	68.938	Xiphophorus_maculatus