EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTRUG00000005241 (Gene tree)
Gene ID: 101070211
Gene Symbol: gtf3ab
Alias: gtf3a|ns:zf-a141|zgc:162349
Full Name: general transcription factor IIIA
Gene Type: protein_coding
Species: Takifugu_rubripes
Status: putative
Strand: Minus strand
Length: 3160 bases
Position: chr10:4435937-4439096
Accession: 101070211
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTRUP00000012581	zf-C2H2	PF00096.26	4.4e-20	1	1
ENSTRUP00000012581	zf-met	PF12874.7	0.00041	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTRUT00000012642	-	2501	XM_003967960	ENSTRUP00000012581	341 (aa)	XP_003968009	H2SJJ8

Gene Model

Click here to download ENSTRUG00000005241's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTRUG00000005241's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTRUG00000005241	gtf3ab	68	33.333	ENSTRUG00000020208	-	50	33.333
ENSTRUG00000005241	gtf3ab	85	35.537	ENSTRUG00000001268	-	88	33.613
ENSTRUG00000005241	gtf3ab	83	32.704	ENSTRUG00000005180	-	81	32.704
ENSTRUG00000005241	gtf3ab	80	30.800	ENSTRUG00000007022	-	66	30.769
ENSTRUG00000005241	gtf3ab	95	32.365	ENSTRUG00000022066	-	90	35.714
ENSTRUG00000005241	gtf3ab	87	36.000	ENSTRUG00000003111	-	83	36.000
ENSTRUG00000005241	gtf3ab	83	33.333	ENSTRUG00000021675	-	50	33.113
ENSTRUG00000005241	gtf3ab	77	31.507	ENSTRUG00000019685	znf319b	80	31.507
ENSTRUG00000005241	gtf3ab	77	32.841	ENSTRUG00000012273	-	72	32.841
ENSTRUG00000005241	gtf3ab	78	32.389	ENSTRUG00000021765	-	50	32.389
ENSTRUG00000005241	gtf3ab	82	37.220	ENSTRUG00000022919	-	60	37.220
ENSTRUG00000005241	gtf3ab	85	31.694	ENSTRUG00000003454	-	59	31.548
ENSTRUG00000005241	gtf3ab	83	36.134	ENSTRUG00000025189	-	70	36.134
ENSTRUG00000005241	gtf3ab	73	31.621	ENSTRUG00000020582	-	80	31.621
ENSTRUG00000005241	gtf3ab	85	39.316	ENSTRUG00000017456	znf236	57	39.316
ENSTRUG00000005241	gtf3ab	89	33.571	ENSTRUG00000022076	-	86	33.562
ENSTRUG00000005241	gtf3ab	82	32.673	ENSTRUG00000025588	snai2	51	32.673
ENSTRUG00000005241	gtf3ab	82	31.197	ENSTRUG00000012157	-	62	31.154
ENSTRUG00000005241	gtf3ab	81	34.444	ENSTRUG00000000995	-	67	32.601
ENSTRUG00000005241	gtf3ab	81	33.721	ENSTRUG00000006896	-	84	31.502
ENSTRUG00000005241	gtf3ab	84	38.406	ENSTRUG00000015687	-	89	38.406
ENSTRUG00000005241	gtf3ab	81	35.878	ENSTRUG00000005321	-	96	35.878
ENSTRUG00000005241	gtf3ab	82	37.000	ENSTRUG00000013906	-	93	37.000
ENSTRUG00000005241	gtf3ab	63	33.735	ENSTRUG00000000419	sna2	53	33.735
ENSTRUG00000005241	gtf3ab	82	35.833	ENSTRUG00000003277	zbtb17	97	34.532
ENSTRUG00000005241	gtf3ab	56	35.714	ENSTRUG00000023491	-	60	35.714
ENSTRUG00000005241	gtf3ab	88	35.135	ENSTRUG00000013850	prdm5	72	35.135
ENSTRUG00000005241	gtf3ab	59	33.557	ENSTRUG00000004525	gfi1b	61	33.557
ENSTRUG00000005241	gtf3ab	85	35.000	ENSTRUG00000019940	-	50	35.000
ENSTRUG00000005241	gtf3ab	79	38.994	ENSTRUG00000019483	-	97	40.541
ENSTRUG00000005241	gtf3ab	84	39.726	ENSTRUG00000014476	-	72	39.726
ENSTRUG00000005241	gtf3ab	84	35.754	ENSTRUG00000024073	-	62	35.754

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTRUG00000005241	gtf3ab	82	44.637	ENSAMEG00000015824	GTF3A	79	44.637	Ailuropoda_melanoleuca
ENSTRUG00000005241	gtf3ab	94	43.769	ENSBTAG00000012600	GTF3A	84	45.545	Bos_taurus
ENSTRUG00000005241	gtf3ab	88	44.516	ENSCAFG00000006794	GTF3A	79	44.291	Canis_familiaris
ENSTRUG00000005241	gtf3ab	88	44.516	ENSCHIG00000010341	-	80	44.983	Capra_hircus
ENSTRUG00000005241	gtf3ab	87	44.884	ENSCHIG00000021040	-	71	44.554	Capra_hircus
ENSTRUG00000005241	gtf3ab	84	47.015	ENSTSYG00000004206	GTF3A	79	47.015	Carlito_syrichta
ENSTRUG00000005241	gtf3ab	88	46.341	ENSCAPG00000015862	GTF3A	89	45.887	Cavia_aperea
ENSTRUG00000005241	gtf3ab	84	45.791	ENSCPOG00000010143	GTF3A	88	45.704	Cavia_porcellus
ENSTRUG00000005241	gtf3ab	88	45.338	ENSCLAG00000003912	GTF3A	93	45.603	Chinchilla_lanigera
ENSTRUG00000005241	gtf3ab	85	43.000	ENSDNOG00000037405	-	70	43.000	Dasypus_novemcinctus
ENSTRUG00000005241	gtf3ab	85	48.889	ENSETEG00000003225	GTF3A	61	48.889	Echinops_telfairi
ENSTRUG00000005241	gtf3ab	90	42.230	ENSEASG00005013216	-	77	42.908	Equus_asinus_asinus
ENSTRUG00000005241	gtf3ab	84	47.170	ENSEASG00005022495	-	64	44.983	Equus_asinus_asinus
ENSTRUG00000005241	gtf3ab	89	43.056	ENSECAG00000014803	GTF3A	69	45.607	Equus_caballus
ENSTRUG00000005241	gtf3ab	82	44.681	ENSECAG00000024825	-	65	44.681	Equus_caballus
ENSTRUG00000005241	gtf3ab	78	47.015	ENSEEUG00000004307	GTF3A	69	46.809	Erinaceus_europaeus
ENSTRUG00000005241	gtf3ab	88	45.833	ENSFCAG00000006982	GTF3A	67	46.367	Felis_catus
ENSTRUG00000005241	gtf3ab	87	46.179	ENSFDAG00000016841	GTF3A	89	45.704	Fukomys_damarensis
ENSTRUG00000005241	gtf3ab	85	48.540	ENSHGLG00000004173	GTF3A	83	48.134	Heterocephalus_glaber_female
ENSTRUG00000005241	gtf3ab	85	48.540	ENSHGLG00100011561	GTF3A	83	48.134	Heterocephalus_glaber_male
ENSTRUG00000005241	gtf3ab	80	48.175	ENSSTOG00000013853	GTF3A	95	43.667	Ictidomys_tridecemlineatus
ENSTRUG00000005241	gtf3ab	89	44.068	ENSJJAG00000011501	Gtf3a	88	46.218	Jaculus_jaculus
ENSTRUG00000005241	gtf3ab	89	41.824	ENSLAFG00000027315	GTF3A	82	41.914	Loxodonta_africana
ENSTRUG00000005241	gtf3ab	90	43.671	ENSMAUG00000016253	Gtf3a	78	44.291	Mesocricetus_auratus
ENSTRUG00000005241	gtf3ab	84	46.218	ENSMICG00000014763	GTF3A	78	45.361	Microcebus_murinus
ENSTRUG00000005241	gtf3ab	86	46.075	MGP_CAROLIEiJ_G0028031	Gtf3a	77	46.992	Mus_caroli
ENSTRUG00000005241	gtf3ab	86	45.734	ENSMUSG00000016503	Gtf3a	77	46.617	Mus_musculus
ENSTRUG00000005241	gtf3ab	86	45.548	MGP_PahariEiJ_G0024597	Gtf3a	77	46.992	Mus_pahari
ENSTRUG00000005241	gtf3ab	86	45.734	MGP_SPRETEiJ_G0029029	Gtf3a	77	46.617	Mus_spretus
ENSTRUG00000005241	gtf3ab	82	44.983	ENSMPUG00000005835	GTF3A	78	44.983	Mustela_putorius_furo
ENSTRUG00000005241	gtf3ab	88	44.872	ENSMLUG00000002158	GTF3A	89	44.108	Myotis_lucifugus
ENSTRUG00000005241	gtf3ab	82	45.704	ENSNLEG00000000331	GTF3A	79	45.704	Nomascus_leucogenys
ENSTRUG00000005241	gtf3ab	84	33.677	ENSMEUG00000010089	GTF3A	79	33.582	Notamacropus_eugenii
ENSTRUG00000005241	gtf3ab	88	40.968	ENSOPRG00000000854	-	75	41.000	Ochotona_princeps
ENSTRUG00000005241	gtf3ab	89	44.951	ENSODEG00000006725	GTF3A	63	47.015	Octodon_degus
ENSTRUG00000005241	gtf3ab	89	44.805	ENSOCUG00000011713	GTF3A	68	44.710	Oryctolagus_cuniculus
ENSTRUG00000005241	gtf3ab	84	47.388	ENSOGAG00000014589	GTF3A	73	47.388	Otolemur_garnettii
ENSTRUG00000005241	gtf3ab	87	42.574	ENSOARG00000012551	GTF3A	83	42.244	Ovis_aries
ENSTRUG00000005241	gtf3ab	88	45.833	ENSPPRG00000002368	GTF3A	79	46.021	Panthera_pardus
ENSTRUG00000005241	gtf3ab	89	46.360	ENSPTIG00000018958	GTF3A	65	46.639	Panthera_tigris_altaica
ENSTRUG00000005241	gtf3ab	93	33.735	ENSPSIG00000011722	GTF3A	67	42.466	Pelodiscus_sinensis
ENSTRUG00000005241	gtf3ab	82	45.704	ENSPPYG00000005235	GTF3A	80	45.704	Pongo_abelii
ENSTRUG00000005241	gtf3ab	85	47.037	ENSPCOG00000016742	GTF3A	60	47.388	Propithecus_coquereli
ENSTRUG00000005241	gtf3ab	87	43.934	ENSPVAG00000012837	GTF3A	71	44.000	Pteropus_vampyrus
ENSTRUG00000005241	gtf3ab	82	40.000	ENSRROG00000043264	GTF3A	80	38.796	Rhinopithecus_roxellana
ENSTRUG00000005241	gtf3ab	84	47.260	ENSSHAG00000016965	GTF3A	76	48.327	Sarcophilus_harrisii
ENSTRUG00000005241	gtf3ab	87	40.067	ENSSARG00000010692	GTF3A	80	39.519	Sorex_araneus
ENSTRUG00000005241	gtf3ab	88	46.735	ENSSPUG00000005307	GTF3A	72	47.388	Sphenodon_punctatus
ENSTRUG00000005241	gtf3ab	88	45.059	ENSTBEG00000012075	GTF3A	56	45.378	Tupaia_belangeri
ENSTRUG00000005241	gtf3ab	88	43.910	ENSTTRG00000008538	GTF3A	69	43.599	Tursiops_truncatus
ENSTRUG00000005241	gtf3ab	96	42.216	ENSUAMG00000019189	GTF3A	79	44.983	Ursus_americanus
ENSTRUG00000005241	gtf3ab	91	42.994	ENSUMAG00000016941	GTF3A	96	44.483	Ursus_maritimus
ENSTRUG00000005241	gtf3ab	84	46.218	ENSVPAG00000004995	GTF3A	79	46.218	Vicugna_pacos
ENSTRUG00000005241	gtf3ab	88	44.516	ENSVVUG00000009197	GTF3A	80	44.291	Vulpes_vulpes