EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTRUG00000005264 (Gene tree)
Gene ID: 101075864
Gene Symbol: vars2
Alias: si:ch211-152p11.2
Full Name: valyl-tRNA synthetase 2%2C mitochondrial
Gene Type: protein_coding
Species: Takifugu_rubripes
Status: putative
Strand: Minus strand
Length: 8973 bases
Position: chrHE591747.1:249124-258096
Accession: 101075864
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTRUP00000012624	tRNA-synt_1g	PF09334.11	1.7e-15	1	1
ENSTRUP00000012623	tRNA-synt_1g	PF09334.11	1.9e-15	1	1
ENSTRUP00000012623	Anticodon_1	PF08264.13	4e-34	1	1
ENSTRUP00000012624	Anticodon_1	PF08264.13	4.1e-34	1	1
ENSTRUP00000012624	tRNA-synt_1	PF00133.22	1.9e-190	1	1
ENSTRUP00000012623	tRNA-synt_1	PF00133.22	2e-190	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTRUT00000012684	-	3584	XM_011618892	ENSTRUP00000012623	1066 (aa)	XP_011617194	H2SJP0
ENSTRUT00000012685	-	3734	-	ENSTRUP00000012624	1049 (aa)	-	H2SJP1

Gene Model

Click here to download ENSTRUG00000005264's gene model file

Pathways

Pathway ID	Pathway Name	Source
tru00970	Aminoacyl-tRNA biosynthesis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSTRUG00000005264's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTRUG00000005264	vars2	70	52.632	ENSTRUG00000012307	vars	70	52.767

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTRUG00000005264	vars2	99	73.516	ENSAPOG00000007396	vars2	99	73.073	Acanthochromis_polyacanthus
ENSTRUG00000005264	vars2	97	52.611	ENSAMEG00000012997	VARS2	91	53.287	Ailuropoda_melanoleuca
ENSTRUG00000005264	vars2	96	73.922	ENSACIG00000004344	vars2	95	74.553	Amphilophus_citrinellus
ENSTRUG00000005264	vars2	99	73.233	ENSAOCG00000000476	vars2	99	72.795	Amphiprion_ocellaris
ENSTRUG00000005264	vars2	99	72.950	ENSAPEG00000008646	vars2	97	72.516	Amphiprion_percula
ENSTRUG00000005264	vars2	99	75.912	ENSATEG00000012291	vars2	99	75.283	Anabas_testudineus
ENSTRUG00000005264	vars2	96	53.156	ENSACAG00000022093	VARS2	91	53.877	Anolis_carolinensis
ENSTRUG00000005264	vars2	99	51.480	ENSANAG00000038018	VARS2	93	52.811	Aotus_nancymaae
ENSTRUG00000005264	vars2	99	72.117	ENSACLG00000018673	vars2	99	71.788	Astatotilapia_calliptera
ENSTRUG00000005264	vars2	96	69.404	ENSAMXG00000017773	vars2	92	71.835	Astyanax_mexicanus
ENSTRUG00000005264	vars2	99	52.262	ENSBTAG00000010698	VARS2	92	53.730	Bos_taurus
ENSTRUG00000005264	vars2	99	51.289	ENSCJAG00000019826	VARS2	93	52.711	Callithrix_jacchus
ENSTRUG00000005264	vars2	97	53.793	ENSCAFG00000000454	VARS2	90	55.098	Canis_familiaris
ENSTRUG00000005264	vars2	87	57.220	ENSCAFG00020019387	VARS2	89	58.762	Canis_lupus_dingo
ENSTRUG00000005264	vars2	98	51.671	ENSCHIG00000007847	VARS2	94	52.830	Capra_hircus
ENSTRUG00000005264	vars2	95	52.637	ENSTSYG00000009904	VARS2	93	53.100	Carlito_syrichta
ENSTRUG00000005264	vars2	88	53.830	ENSCAPG00000017770	VARS2	99	53.291	Cavia_aperea
ENSTRUG00000005264	vars2	96	52.750	ENSCPOG00000021834	VARS2	94	53.029	Cavia_porcellus
ENSTRUG00000005264	vars2	99	51.576	ENSCCAG00000037907	VARS2	93	52.912	Cebus_capucinus
ENSTRUG00000005264	vars2	96	52.399	ENSCATG00000032554	VARS2	93	53.287	Cercocebus_atys
ENSTRUG00000005264	vars2	99	51.311	ENSCLAG00000002889	VARS2	94	52.673	Chinchilla_lanigera
ENSTRUG00000005264	vars2	97	52.500	ENSCSAG00000008327	VARS2	92	53.661	Chlorocebus_sabaeus
ENSTRUG00000005264	vars2	93	56.263	ENSCPBG00000021502	VARS2	96	56.263	Chrysemys_picta_bellii
ENSTRUG00000005264	vars2	96	52.111	ENSCANG00000014991	VARS2	93	52.935	Colobus_angolensis_palliatus
ENSTRUG00000005264	vars2	97	52.023	ENSCGRG00001021535	Vars2	91	53.933	Cricetulus_griseus_chok1gshd
ENSTRUG00000005264	vars2	97	52.023	ENSCGRG00000014112	Vars2	91	53.933	Cricetulus_griseus_crigri
ENSTRUG00000005264	vars2	93	72.624	ENSCSEG00000015432	vars2	93	78.093	Cynoglossus_semilaevis
ENSTRUG00000005264	vars2	66	74.646	ENSCVAG00000017765	vars2	98	74.646	Cyprinodon_variegatus
ENSTRUG00000005264	vars2	99	67.885	ENSDARG00000056717	vars2	94	69.809	Danio_rerio
ENSTRUG00000005264	vars2	79	51.687	ENSDORG00000008516	Vars2	92	51.127	Dipodomys_ordii
ENSTRUG00000005264	vars2	96	47.779	ENSETEG00000014844	VARS2	88	49.315	Echinops_telfairi
ENSTRUG00000005264	vars2	99	49.670	ENSEASG00005019997	VARS2	98	54.754	Equus_asinus_asinus
ENSTRUG00000005264	vars2	95	52.780	ENSECAG00000018202	VARS2	94	53.333	Equus_caballus
ENSTRUG00000005264	vars2	61	57.843	ENSEEUG00000012591	-	59	57.843	Erinaceus_europaeus
ENSTRUG00000005264	vars2	99	67.897	ENSELUG00000017824	vars2	95	68.956	Esox_lucius
ENSTRUG00000005264	vars2	97	52.729	ENSFCAG00000010531	VARS2	93	53.247	Felis_catus
ENSTRUG00000005264	vars2	96	52.376	ENSFDAG00000017216	VARS2	91	53.830	Fukomys_damarensis
ENSTRUG00000005264	vars2	94	68.342	ENSFHEG00000013932	vars2	94	70.084	Fundulus_heteroclitus
ENSTRUG00000005264	vars2	92	68.912	ENSGMOG00000018960	vars2	99	68.912	Gadus_morhua
ENSTRUG00000005264	vars2	94	71.359	ENSGAFG00000004737	vars2	92	71.359	Gambusia_affinis
ENSTRUG00000005264	vars2	92	76.319	ENSGACG00000001464	vars2	99	74.900	Gasterosteus_aculeatus
ENSTRUG00000005264	vars2	91	56.580	ENSGAGG00000011652	VARS2	98	56.339	Gopherus_agassizii
ENSTRUG00000005264	vars2	97	51.777	ENSGGOG00000014587	VARS2	93	52.836	Gorilla_gorilla
ENSTRUG00000005264	vars2	99	69.311	ENSHBUG00000002448	vars2	95	72.480	Haplochromis_burtoni
ENSTRUG00000005264	vars2	99	50.936	ENSHGLG00000012886	VARS2	91	52.075	Heterocephalus_glaber_female
ENSTRUG00000005264	vars2	99	50.843	ENSHGLG00100016535	VARS2	94	51.976	Heterocephalus_glaber_male
ENSTRUG00000005264	vars2	69	71.526	ENSHCOG00000017907	vars2	97	71.683	Hippocampus_comes
ENSTRUG00000005264	vars2	93	69.840	ENSIPUG00000015573	Vars2	93	69.840	Ictalurus_punctatus
ENSTRUG00000005264	vars2	96	52.825	ENSSTOG00000009924	VARS2	94	52.381	Ictidomys_tridecemlineatus
ENSTRUG00000005264	vars2	97	52.246	ENSJJAG00000011144	Vars2	95	51.838	Jaculus_jaculus
ENSTRUG00000005264	vars2	99	71.013	ENSKMAG00000001393	vars2	99	70.572	Kryptolebias_marmoratus
ENSTRUG00000005264	vars2	53	81.753	ENSLBEG00000005480	-	81	81.736	Labrus_bergylta
ENSTRUG00000005264	vars2	99	71.863	ENSLBEG00000011949	vars2	98	71.094	Labrus_bergylta
ENSTRUG00000005264	vars2	96	52.004	ENSLACG00000001576	-	97	51.917	Latimeria_chalumnae
ENSTRUG00000005264	vars2	98	51.671	ENSLAFG00000015183	VARS2	94	52.941	Loxodonta_africana
ENSTRUG00000005264	vars2	96	51.681	ENSMFAG00000042367	VARS2	93	52.642	Macaca_fascicularis
ENSTRUG00000005264	vars2	96	51.777	ENSMMUG00000018609	VARS2	93	52.742	Macaca_mulatta
ENSTRUG00000005264	vars2	96	51.873	ENSMNEG00000043163	VARS2	93	52.841	Macaca_nemestrina
ENSTRUG00000005264	vars2	97	52.212	ENSMLEG00000041728	VARS2	91	53.287	Mandrillus_leucophaeus
ENSTRUG00000005264	vars2	99	71.810	ENSMAMG00000020339	vars2	99	71.255	Mastacembelus_armatus
ENSTRUG00000005264	vars2	99	72.023	ENSMZEG00005017669	vars2	99	71.695	Maylandia_zebra
ENSTRUG00000005264	vars2	98	52.363	ENSMAUG00000018946	Vars2	91	54.424	Mesocricetus_auratus
ENSTRUG00000005264	vars2	82	57.617	ENSMICG00000005365	VARS2	93	59.042	Microcebus_murinus
ENSTRUG00000005264	vars2	96	48.218	ENSMOCG00000014607	Vars2	91	48.978	Microtus_ochrogaster
ENSTRUG00000005264	vars2	99	74.187	ENSMMOG00000012122	vars2	94	75.624	Mola_mola
ENSTRUG00000005264	vars2	95	52.144	ENSMODG00000015848	VARS2	90	52.749	Monodelphis_domestica
ENSTRUG00000005264	vars2	93	75.127	ENSMALG00000009217	vars2	99	74.525	Monopterus_albus
ENSTRUG00000005264	vars2	96	52.524	MGP_CAROLIEiJ_G0021529	Vars2	94	58.258	Mus_caroli
ENSTRUG00000005264	vars2	94	53.360	ENSMUSG00000038838	Vars2	94	58.076	Mus_musculus
ENSTRUG00000005264	vars2	95	53.181	MGP_PahariEiJ_G0020523	Vars2	99	55.822	Mus_pahari
ENSTRUG00000005264	vars2	94	53.360	MGP_SPRETEiJ_G0022436	Vars2	97	56.591	Mus_spretus
ENSTRUG00000005264	vars2	97	52.490	ENSMPUG00000011643	VARS2	93	53.447	Mustela_putorius_furo
ENSTRUG00000005264	vars2	97	52.678	ENSMLUG00000002356	VARS2	88	53.784	Myotis_lucifugus
ENSTRUG00000005264	vars2	96	49.802	ENSNGAG00000020607	Vars2	90	51.093	Nannospalax_galili
ENSTRUG00000005264	vars2	68	66.851	ENSNBRG00000001624	vars2	60	66.851	Neolamprologus_brichardi
ENSTRUG00000005264	vars2	97	51.834	ENSNLEG00000005625	VARS2	91	52.800	Nomascus_leucogenys
ENSTRUG00000005264	vars2	76	56.500	ENSMEUG00000014475	VARS2	85	56.500	Notamacropus_eugenii
ENSTRUG00000005264	vars2	89	53.623	ENSOPRG00000000682	VARS2	84	60.366	Ochotona_princeps
ENSTRUG00000005264	vars2	99	51.139	ENSODEG00000017965	VARS2	94	52.414	Octodon_degus
ENSTRUG00000005264	vars2	93	54.179	ENSONIG00000004734	vars2	99	54.122	Oreochromis_niloticus
ENSTRUG00000005264	vars2	71	45.921	ENSOANG00000000398	-	92	45.921	Ornithorhynchus_anatinus
ENSTRUG00000005264	vars2	98	49.197	ENSOCUG00000021496	VARS2	61	50.245	Oryctolagus_cuniculus
ENSTRUG00000005264	vars2	94	71.022	ENSORLG00000010632	vars2	93	71.022	Oryzias_latipes
ENSTRUG00000005264	vars2	94	71.078	ENSORLG00020018584	vars2	94	71.078	Oryzias_latipes_hni
ENSTRUG00000005264	vars2	94	71.078	ENSORLG00015010408	vars2	94	71.078	Oryzias_latipes_hsok
ENSTRUG00000005264	vars2	95	71.881	ENSOMEG00000008360	vars2	94	71.178	Oryzias_melastigma
ENSTRUG00000005264	vars2	95	51.949	ENSOGAG00000006087	VARS2	90	53.078	Otolemur_garnettii
ENSTRUG00000005264	vars2	98	51.046	ENSOARG00000010844	VARS2	92	52.438	Ovis_aries
ENSTRUG00000005264	vars2	96	51.965	ENSPPAG00000041141	VARS2	93	52.736	Pan_paniscus
ENSTRUG00000005264	vars2	94	53.869	ENSPPRG00000006751	VARS2	87	54.782	Panthera_pardus
ENSTRUG00000005264	vars2	94	53.769	ENSPTIG00000017799	VARS2	93	55.100	Panthera_tigris_altaica
ENSTRUG00000005264	vars2	96	51.965	ENSPTRG00000034497	VARS2	93	52.736	Pan_troglodytes
ENSTRUG00000005264	vars2	95	53.406	ENSPANG00000018481	VARS2	93	54.359	Papio_anubis
ENSTRUG00000005264	vars2	96	68.191	ENSPKIG00000011372	vars2	93	68.227	Paramormyrops_kingsleyae
ENSTRUG00000005264	vars2	60	63.679	ENSPSIG00000006206	VARS2	95	62.275	Pelodiscus_sinensis
ENSTRUG00000005264	vars2	97	69.089	ENSPMGG00000000465	vars2	94	70.319	Periophthalmus_magnuspinnatus
ENSTRUG00000005264	vars2	94	53.166	ENSPEMG00000014691	Vars2	93	53.065	Peromyscus_maniculatus_bairdii
ENSTRUG00000005264	vars2	95	52.344	ENSPCIG00000015040	VARS2	89	55.111	Phascolarctos_cinereus
ENSTRUG00000005264	vars2	96	72.451	ENSPFOG00000017616	vars2	94	72.031	Poecilia_formosa
ENSTRUG00000005264	vars2	96	72.141	ENSPLAG00000019778	vars2	95	71.722	Poecilia_latipinna
ENSTRUG00000005264	vars2	99	70.699	ENSPMEG00000011123	vars2	95	71.722	Poecilia_mexicana
ENSTRUG00000005264	vars2	93	64.623	ENSPREG00000014998	vars2	94	64.623	Poecilia_reticulata
ENSTRUG00000005264	vars2	95	53.116	ENSPPYG00000016424	VARS2	92	53.280	Pongo_abelii
ENSTRUG00000005264	vars2	66	55.167	ENSPCAG00000006946	VARS2	63	55.167	Procavia_capensis
ENSTRUG00000005264	vars2	93	53.286	ENSPCOG00000014839	VARS2	87	53.719	Propithecus_coquereli
ENSTRUG00000005264	vars2	96	52.461	ENSPVAG00000004197	VARS2	92	53.138	Pteropus_vampyrus
ENSTRUG00000005264	vars2	91	61.713	ENSPNYG00000010314	vars2	99	61.476	Pundamilia_nyererei
ENSTRUG00000005264	vars2	99	68.281	ENSPNAG00000026793	vars2	93	69.990	Pygocentrus_nattereri
ENSTRUG00000005264	vars2	96	52.386	ENSRNOG00000000833	Vars2	93	52.941	Rattus_norvegicus
ENSTRUG00000005264	vars2	96	52.111	ENSRBIG00000032725	VARS2	93	52.988	Rhinopithecus_bieti
ENSTRUG00000005264	vars2	96	52.207	ENSRROG00000043847	VARS2	93	53.088	Rhinopithecus_roxellana
ENSTRUG00000005264	vars2	99	50.375	ENSSBOG00000033240	VARS2	91	51.721	Saimiri_boliviensis_boliviensis
ENSTRUG00000005264	vars2	93	53.862	ENSSHAG00000009307	VARS2	89	54.900	Sarcophilus_harrisii
ENSTRUG00000005264	vars2	96	67.160	ENSSFOG00015016187	vars2	93	67.292	Scleropages_formosus
ENSTRUG00000005264	vars2	99	74.324	ENSSMAG00000020842	vars2	99	77.536	Scophthalmus_maximus
ENSTRUG00000005264	vars2	99	75.740	ENSSDUG00000011598	vars2	99	75.399	Seriola_dumerili
ENSTRUG00000005264	vars2	99	73.988	ENSSLDG00000015492	vars2	99	73.769	Seriola_lalandi_dorsalis
ENSTRUG00000005264	vars2	51	59.259	ENSSARG00000003786	-	61	59.259	Sorex_araneus
ENSTRUG00000005264	vars2	80	58.600	ENSSPUG00000014700	VARS2	88	58.600	Sphenodon_punctatus
ENSTRUG00000005264	vars2	99	72.381	ENSSPAG00000004654	vars2	99	71.778	Stegastes_partitus
ENSTRUG00000005264	vars2	97	52.708	ENSSSCG00000001384	VARS2	93	55.378	Sus_scrofa
ENSTRUG00000005264	vars2	98	82.021	ENSTNIG00000005916	vars2	98	81.446	Tetraodon_nigroviridis
ENSTRUG00000005264	vars2	84	50.971	ENSTTRG00000012243	VARS2	79	59.748	Tursiops_truncatus
ENSTRUG00000005264	vars2	99	52.015	ENSUAMG00000026124	VARS2	99	53.664	Ursus_americanus
ENSTRUG00000005264	vars2	99	52.358	ENSUMAG00000019894	VARS2	94	53.227	Ursus_maritimus
ENSTRUG00000005264	vars2	97	53.399	ENSVVUG00000010754	VARS2	86	54.686	Vulpes_vulpes
ENSTRUG00000005264	vars2	91	52.534	ENSXETG00000003036	vars2	99	52.534	Xenopus_tropicalis
ENSTRUG00000005264	vars2	92	74.949	ENSXCOG00000003455	vars2	94	74.949	Xiphophorus_couchianus
ENSTRUG00000005264	vars2	99	71.860	ENSXMAG00000013523	vars2	96	73.095	Xiphophorus_maculatus