EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSTRUG00000005287 (Gene tree)
Gene ID: 101077823
Gene Symbol: NCBP1
Alias: CBP80|NCBP|Sto1
Full Name: nuclear cap binding protein subunit 1
Gene Type: protein_coding
Species: Takifugu_rubripes
Status: putative
Strand: Minus strand
Length: 8577 bases
Position: chrHE591786.1:189584-198160
Accession: 101077823
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTRUP00000012689	MIF4G_like	PF09088.11	7.5e-36	1	1
ENSTRUP00000012689	MIF4G_like_2	PF09090.11	3e-86	1	1
ENSTRUP00000012689	MIF4G	PF02854.19	4.8e-27	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTRUT00000012750	NCBP1-201	6126	XM_003978106	ENSTRUP00000012689	795 (aa)	XP_003978155	H2SJV6

Gene Model

Click here to download ENSTRUG00000005287's gene model file

Pathways

Pathway ID	Pathway Name	Source
tru03013	RNA transport	KEGG
tru03015	mRNA surveillance pathway	KEGG
tru03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSTRUG00000005287's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTRUG00000005287	NCBP1	99	81.612	ENSG00000136937	NCBP1	99	81.990	Homo_sapiens
ENSTRUG00000005287	NCBP1	100	94.843	ENSAPOG00000008002	NCBP1	100	94.843	Acanthochromis_polyacanthus
ENSTRUG00000005287	NCBP1	99	81.533	ENSAMEG00000004763	NCBP1	99	81.910	Ailuropoda_melanoleuca
ENSTRUG00000005287	NCBP1	100	94.214	ENSACIG00000000274	NCBP1	100	94.214	Amphilophus_citrinellus
ENSTRUG00000005287	NCBP1	100	94.465	ENSAOCG00000021148	NCBP1	100	94.465	Amphiprion_ocellaris
ENSTRUG00000005287	NCBP1	100	94.465	ENSAPEG00000001701	NCBP1	100	94.465	Amphiprion_percula
ENSTRUG00000005287	NCBP1	100	94.969	ENSATEG00000006929	NCBP1	100	94.969	Anabas_testudineus
ENSTRUG00000005287	NCBP1	95	82.763	ENSAPLG00000016318	NCBP1	99	82.895	Anas_platyrhynchos
ENSTRUG00000005287	NCBP1	99	82.397	ENSACAG00000004409	NCBP1	87	82.522	Anolis_carolinensis
ENSTRUG00000005287	NCBP1	99	79.597	ENSANAG00000025744	NCBP1	99	81.655	Aotus_nancymaae
ENSTRUG00000005287	NCBP1	100	93.711	ENSACLG00000014812	NCBP1	100	93.711	Astatotilapia_calliptera
ENSTRUG00000005287	NCBP1	100	89.084	ENSAMXG00000016364	NCBP1	100	89.084	Astyanax_mexicanus
ENSTRUG00000005287	NCBP1	99	81.738	ENSBTAG00000009732	NCBP1	99	86.405	Bos_taurus
ENSTRUG00000005287	NCBP1	100	37.023	WBGene00018156	ncbp-1	100	36.900	Caenorhabditis_elegans
ENSTRUG00000005287	NCBP1	99	81.612	ENSCJAG00000010840	NCBP1	99	85.476	Callithrix_jacchus
ENSTRUG00000005287	NCBP1	99	81.738	ENSCAFG00000002445	NCBP1	99	82.116	Canis_familiaris
ENSTRUG00000005287	NCBP1	98	81.714	ENSCAFG00020017997	NCBP1	96	88.030	Canis_lupus_dingo
ENSTRUG00000005287	NCBP1	99	81.612	ENSCHIG00000020139	NCBP1	99	81.990	Capra_hircus
ENSTRUG00000005287	NCBP1	52	86.098	ENSTSYG00000011914	NCBP1	98	86.207	Carlito_syrichta
ENSTRUG00000005287	NCBP1	81	74.303	ENSCAPG00000014252	NCBP1	90	74.303	Cavia_aperea
ENSTRUG00000005287	NCBP1	95	81.374	ENSCPOG00000012573	NCBP1	98	81.770	Cavia_porcellus
ENSTRUG00000005287	NCBP1	99	81.612	ENSCCAG00000032297	NCBP1	99	81.990	Cebus_capucinus
ENSTRUG00000005287	NCBP1	99	81.612	ENSCATG00000010052	NCBP1	99	82.011	Cercocebus_atys
ENSTRUG00000005287	NCBP1	99	81.738	ENSCLAG00000014339	NCBP1	99	82.116	Chinchilla_lanigera
ENSTRUG00000005287	NCBP1	99	81.612	ENSCSAG00000010929	NCBP1	99	81.990	Chlorocebus_sabaeus
ENSTRUG00000005287	NCBP1	89	82.075	ENSCHOG00000010332	NCBP1	91	78.261	Choloepus_hoffmanni
ENSTRUG00000005287	NCBP1	99	80.101	ENSCPBG00000024344	NCBP1	99	83.058	Chrysemys_picta_bellii
ENSTRUG00000005287	NCBP1	99	53.778	ENSCING00000008990	-	99	53.778	Ciona_intestinalis
ENSTRUG00000005287	NCBP1	99	52.750	ENSCSAVG00000005300	-	99	53.608	Ciona_savignyi
ENSTRUG00000005287	NCBP1	99	81.612	ENSCANG00000036913	NCBP1	99	81.990	Colobus_angolensis_palliatus
ENSTRUG00000005287	NCBP1	99	80.982	ENSCGRG00001015771	Ncbp1	99	81.360	Cricetulus_griseus_chok1gshd
ENSTRUG00000005287	NCBP1	99	81.122	ENSCGRG00000010311	Ncbp1	99	81.505	Cricetulus_griseus_crigri
ENSTRUG00000005287	NCBP1	100	93.962	ENSCSEG00000012377	NCBP1	100	93.962	Cynoglossus_semilaevis
ENSTRUG00000005287	NCBP1	100	92.211	ENSCVAG00000008795	NCBP1	100	92.211	Cyprinodon_variegatus
ENSTRUG00000005287	NCBP1	99	80.730	ENSDNOG00000006885	NCBP1	99	81.108	Dasypus_novemcinctus
ENSTRUG00000005287	NCBP1	99	77.569	ENSDORG00000013652	Ncbp1	99	77.945	Dipodomys_ordii
ENSTRUG00000005287	NCBP1	99	56.931	FBgn0022942	Cbp80	99	57.447	Drosophila_melanogaster
ENSTRUG00000005287	NCBP1	83	32.796	FBgn0038887	CG7907	87	32.796	Drosophila_melanogaster
ENSTRUG00000005287	NCBP1	89	77.922	ENSETEG00000009705	NCBP1	89	77.922	Echinops_telfairi
ENSTRUG00000005287	NCBP1	99	73.836	ENSEBUG00000008386	NCBP1	99	73.836	Eptatretus_burgeri
ENSTRUG00000005287	NCBP1	99	81.234	ENSEASG00005022795	NCBP1	99	81.612	Equus_asinus_asinus
ENSTRUG00000005287	NCBP1	99	81.360	ENSECAG00000013847	NCBP1	99	81.738	Equus_caballus
ENSTRUG00000005287	NCBP1	95	77.147	ENSEEUG00000015973	NCBP1	99	77.675	Erinaceus_europaeus
ENSTRUG00000005287	NCBP1	100	90.201	ENSELUG00000022519	NCBP1	100	90.201	Esox_lucius
ENSTRUG00000005287	NCBP1	99	81.612	ENSFCAG00000001206	NCBP1	99	81.990	Felis_catus
ENSTRUG00000005287	NCBP1	98	83.057	ENSFALG00000001193	NCBP1	99	83.842	Ficedula_albicollis
ENSTRUG00000005287	NCBP1	99	81.612	ENSFDAG00000010864	NCBP1	99	81.992	Fukomys_damarensis
ENSTRUG00000005287	NCBP1	100	92.588	ENSFHEG00000000655	NCBP1	100	92.588	Fundulus_heteroclitus
ENSTRUG00000005287	NCBP1	100	89.322	ENSGMOG00000008653	NCBP1	99	89.322	Gadus_morhua
ENSTRUG00000005287	NCBP1	98	83.632	ENSGALG00000002087	NCBP1	99	83.417	Gallus_gallus
ENSTRUG00000005287	NCBP1	100	93.593	ENSGAFG00000017787	NCBP1	100	93.593	Gambusia_affinis
ENSTRUG00000005287	NCBP1	100	92.481	ENSGACG00000016772	NCBP1	99	92.481	Gasterosteus_aculeatus
ENSTRUG00000005287	NCBP1	99	82.746	ENSGAGG00000019483	NCBP1	99	83.396	Gopherus_agassizii
ENSTRUG00000005287	NCBP1	99	81.612	ENSGGOG00000001376	NCBP1	99	81.990	Gorilla_gorilla
ENSTRUG00000005287	NCBP1	100	93.711	ENSHBUG00000020843	NCBP1	100	93.711	Haplochromis_burtoni
ENSTRUG00000005287	NCBP1	99	81.738	ENSHGLG00000001882	NCBP1	99	82.116	Heterocephalus_glaber_female
ENSTRUG00000005287	NCBP1	99	71.734	ENSHGLG00000018112	-	99	71.734	Heterocephalus_glaber_female
ENSTRUG00000005287	NCBP1	99	81.738	ENSHGLG00100013014	NCBP1	99	82.116	Heterocephalus_glaber_male
ENSTRUG00000005287	NCBP1	99	71.482	ENSHGLG00100017373	-	99	71.482	Heterocephalus_glaber_male
ENSTRUG00000005287	NCBP1	74	85.835	ENSHCOG00000000204	NCBP1	87	85.835	Hippocampus_comes
ENSTRUG00000005287	NCBP1	100	89.070	ENSIPUG00000007275	ncbp1	100	89.070	Ictalurus_punctatus
ENSTRUG00000005287	NCBP1	99	81.486	ENSSTOG00000002695	NCBP1	99	81.864	Ictidomys_tridecemlineatus
ENSTRUG00000005287	NCBP1	100	93.208	ENSKMAG00000003594	NCBP1	99	94.309	Kryptolebias_marmoratus
ENSTRUG00000005287	NCBP1	100	92.184	ENSLBEG00000011661	NCBP1	100	92.184	Labrus_bergylta
ENSTRUG00000005287	NCBP1	99	76.961	ENSLACG00000013955	NCBP1	99	77.363	Latimeria_chalumnae
ENSTRUG00000005287	NCBP1	99	76.090	ENSLOCG00000009579	NCBP1	99	76.588	Lepisosteus_oculatus
ENSTRUG00000005287	NCBP1	99	81.612	ENSLAFG00000005999	NCBP1	99	81.990	Loxodonta_africana
ENSTRUG00000005287	NCBP1	99	81.612	ENSMFAG00000030994	NCBP1	99	82.011	Macaca_fascicularis
ENSTRUG00000005287	NCBP1	98	81.609	ENSMMUG00000012281	NCBP1	99	82.011	Macaca_mulatta
ENSTRUG00000005287	NCBP1	99	81.612	ENSMNEG00000042790	NCBP1	99	81.990	Macaca_nemestrina
ENSTRUG00000005287	NCBP1	99	81.612	ENSMLEG00000030374	NCBP1	99	81.990	Mandrillus_leucophaeus
ENSTRUG00000005287	NCBP1	100	93.585	ENSMAMG00000014806	NCBP1	100	93.585	Mastacembelus_armatus
ENSTRUG00000005287	NCBP1	100	93.711	ENSMZEG00005003469	NCBP1	100	93.711	Maylandia_zebra
ENSTRUG00000005287	NCBP1	97	91.860	ENSMZEG00005009290	-	100	91.860	Maylandia_zebra
ENSTRUG00000005287	NCBP1	98	80.971	ENSMAUG00000020583	Ncbp1	99	81.354	Mesocricetus_auratus
ENSTRUG00000005287	NCBP1	99	81.234	ENSMICG00000012682	NCBP1	99	81.612	Microcebus_murinus
ENSTRUG00000005287	NCBP1	99	80.856	ENSMOCG00000015818	Ncbp1	99	81.234	Microtus_ochrogaster
ENSTRUG00000005287	NCBP1	91	93.481	ENSMMOG00000002610	NCBP1	100	93.481	Mola_mola
ENSTRUG00000005287	NCBP1	99	81.738	ENSMODG00000003202	NCBP1	99	81.864	Monodelphis_domestica
ENSTRUG00000005287	NCBP1	100	93.711	ENSMALG00000003547	NCBP1	100	93.711	Monopterus_albus
ENSTRUG00000005287	NCBP1	99	81.108	MGP_CAROLIEiJ_G0025982	Ncbp1	99	81.486	Mus_caroli
ENSTRUG00000005287	NCBP1	99	81.108	ENSMUSG00000028330	Ncbp1	99	81.486	Mus_musculus
ENSTRUG00000005287	NCBP1	99	81.108	MGP_PahariEiJ_G0028318	Ncbp1	99	81.486	Mus_pahari
ENSTRUG00000005287	NCBP1	99	81.108	MGP_SPRETEiJ_G0026945	Ncbp1	99	81.486	Mus_spretus
ENSTRUG00000005287	NCBP1	99	81.612	ENSMPUG00000006399	NCBP1	99	81.990	Mustela_putorius_furo
ENSTRUG00000005287	NCBP1	98	80.715	ENSMLUG00000015201	NCBP1	99	81.098	Myotis_lucifugus
ENSTRUG00000005287	NCBP1	99	81.864	ENSNGAG00000014101	Ncbp1	99	81.992	Nannospalax_galili
ENSTRUG00000005287	NCBP1	76	97.357	ENSNBRG00000014674	NCBP1	97	97.357	Neolamprologus_brichardi
ENSTRUG00000005287	NCBP1	99	81.612	ENSNLEG00000016909	NCBP1	99	82.011	Nomascus_leucogenys
ENSTRUG00000005287	NCBP1	89	82.046	ENSMEUG00000010672	NCBP1	90	82.046	Notamacropus_eugenii
ENSTRUG00000005287	NCBP1	84	73.569	ENSOPRG00000002144	-	88	74.242	Ochotona_princeps
ENSTRUG00000005287	NCBP1	99	81.612	ENSODEG00000003232	NCBP1	99	81.990	Octodon_degus
ENSTRUG00000005287	NCBP1	100	93.459	ENSONIG00000001502	NCBP1	100	93.459	Oreochromis_niloticus
ENSTRUG00000005287	NCBP1	78	85.233	ENSOANG00000001918	NCBP1	100	85.233	Ornithorhynchus_anatinus
ENSTRUG00000005287	NCBP1	98	81.026	ENSOCUG00000013853	NCBP1	97	81.410	Oryctolagus_cuniculus
ENSTRUG00000005287	NCBP1	100	92.365	ENSORLG00000011008	NCBP1	100	92.365	Oryzias_latipes
ENSTRUG00000005287	NCBP1	100	92.616	ENSORLG00020017455	NCBP1	100	92.616	Oryzias_latipes_hni
ENSTRUG00000005287	NCBP1	100	92.491	ENSORLG00015012127	NCBP1	100	92.491	Oryzias_latipes_hsok
ENSTRUG00000005287	NCBP1	100	92.115	ENSOMEG00000020698	NCBP1	100	92.115	Oryzias_melastigma
ENSTRUG00000005287	NCBP1	99	81.407	ENSOGAG00000013888	NCBP1	99	81.784	Otolemur_garnettii
ENSTRUG00000005287	NCBP1	99	81.612	ENSOARG00000011233	NCBP1	99	81.990	Ovis_aries
ENSTRUG00000005287	NCBP1	99	81.612	ENSPPAG00000026462	NCBP1	99	81.990	Pan_paniscus
ENSTRUG00000005287	NCBP1	99	81.738	ENSPPRG00000022574	NCBP1	99	82.116	Panthera_pardus
ENSTRUG00000005287	NCBP1	99	81.738	ENSPTIG00000018507	NCBP1	99	82.116	Panthera_tigris_altaica
ENSTRUG00000005287	NCBP1	99	81.612	ENSPTRG00000021167	NCBP1	99	81.990	Pan_troglodytes
ENSTRUG00000005287	NCBP1	99	81.612	ENSPANG00000025591	NCBP1	99	82.011	Papio_anubis
ENSTRUG00000005287	NCBP1	99	86.272	ENSPKIG00000015861	NCBP1	99	86.272	Paramormyrops_kingsleyae
ENSTRUG00000005287	NCBP1	64	81.018	ENSPSIG00000009558	NCBP1	99	82.031	Pelodiscus_sinensis
ENSTRUG00000005287	NCBP1	100	88.847	ENSPMGG00000020476	NCBP1	100	88.847	Periophthalmus_magnuspinnatus
ENSTRUG00000005287	NCBP1	99	80.605	ENSPEMG00000020105	Ncbp1	99	80.982	Peromyscus_maniculatus_bairdii
ENSTRUG00000005287	NCBP1	99	68.539	ENSPMAG00000005533	NCBP1	99	68.539	Petromyzon_marinus
ENSTRUG00000005287	NCBP1	99	81.612	ENSPCIG00000015800	NCBP1	99	84.141	Phascolarctos_cinereus
ENSTRUG00000005287	NCBP1	100	93.617	ENSPFOG00000004158	NCBP1	100	93.617	Poecilia_formosa
ENSTRUG00000005287	NCBP1	100	93.593	ENSPLAG00000020002	NCBP1	100	93.593	Poecilia_latipinna
ENSTRUG00000005287	NCBP1	100	93.970	ENSPMEG00000019821	NCBP1	100	93.970	Poecilia_mexicana
ENSTRUG00000005287	NCBP1	100	93.852	ENSPREG00000006035	NCBP1	100	93.852	Poecilia_reticulata
ENSTRUG00000005287	NCBP1	99	81.612	ENSPPYG00000019426	NCBP1	99	81.990	Pongo_abelii
ENSTRUG00000005287	NCBP1	90	79.154	ENSPCAG00000009943	NCBP1	90	79.154	Procavia_capensis
ENSTRUG00000005287	NCBP1	82	86.842	ENSPCOG00000020024	NCBP1	98	86.842	Propithecus_coquereli
ENSTRUG00000005287	NCBP1	99	81.360	ENSPVAG00000005924	NCBP1	99	81.738	Pteropus_vampyrus
ENSTRUG00000005287	NCBP1	91	92.500	ENSPNYG00000002140	NCBP1	99	92.500	Pundamilia_nyererei
ENSTRUG00000005287	NCBP1	100	89.460	ENSPNAG00000027753	NCBP1	100	89.460	Pygocentrus_nattereri
ENSTRUG00000005287	NCBP1	99	81.108	ENSRNOG00000023605	Ncbp1	99	81.486	Rattus_norvegicus
ENSTRUG00000005287	NCBP1	99	81.612	ENSRBIG00000043175	NCBP1	99	82.011	Rhinopithecus_bieti
ENSTRUG00000005287	NCBP1	99	81.612	ENSRROG00000029767	NCBP1	99	81.990	Rhinopithecus_roxellana
ENSTRUG00000005287	NCBP1	99	81.612	ENSSBOG00000019378	NCBP1	98	86.829	Saimiri_boliviensis_boliviensis
ENSTRUG00000005287	NCBP1	69	77.099	ENSSHAG00000015882	NCBP1	72	77.692	Sarcophilus_harrisii
ENSTRUG00000005287	NCBP1	98	85.951	ENSSFOG00015001872	NCBP1	99	85.013	Scleropages_formosus
ENSTRUG00000005287	NCBP1	100	92.453	ENSSMAG00000007463	NCBP1	100	92.453	Scophthalmus_maximus
ENSTRUG00000005287	NCBP1	100	93.208	ENSSDUG00000007019	NCBP1	100	93.553	Seriola_dumerili
ENSTRUG00000005287	NCBP1	100	93.962	ENSSLDG00000021924	NCBP1	100	93.962	Seriola_lalandi_dorsalis
ENSTRUG00000005287	NCBP1	85	70.346	ENSSARG00000007274	NCBP1	86	71.212	Sorex_araneus
ENSTRUG00000005287	NCBP1	99	76.826	ENSSPUG00000008609	NCBP1	99	76.826	Sphenodon_punctatus
ENSTRUG00000005287	NCBP1	100	95.094	ENSSPAG00000012550	NCBP1	100	95.094	Stegastes_partitus
ENSTRUG00000005287	NCBP1	99	81.612	ENSSSCG00000005366	NCBP1	99	81.990	Sus_scrofa
ENSTRUG00000005287	NCBP1	99	77.960	ENSTGUG00000001472	NCBP1	99	78.994	Taeniopygia_guttata
ENSTRUG00000005287	NCBP1	99	79.219	ENSTBEG00000004035	NCBP1	99	79.597	Tupaia_belangeri
ENSTRUG00000005287	NCBP1	88	83.251	ENSTTRG00000000507	NCBP1	88	83.251	Tursiops_truncatus
ENSTRUG00000005287	NCBP1	99	81.612	ENSUAMG00000005471	NCBP1	99	81.990	Ursus_americanus
ENSTRUG00000005287	NCBP1	97	79.560	ENSUMAG00000011865	NCBP1	99	81.659	Ursus_maritimus
ENSTRUG00000005287	NCBP1	99	77.960	ENSVPAG00000010537	NCBP1	99	78.463	Vicugna_pacos
ENSTRUG00000005287	NCBP1	99	81.738	ENSVVUG00000019725	NCBP1	99	82.116	Vulpes_vulpes
ENSTRUG00000005287	NCBP1	99	78.841	ENSXETG00000010179	ncbp1	99	78.841	Xenopus_tropicalis
ENSTRUG00000005287	NCBP1	100	93.342	ENSXMAG00000018253	NCBP1	100	93.342	Xiphophorus_maculatus