EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTRUG00000005321 (Gene tree)
Gene ID: 105417105
Gene Symbol: -
Alias: -
Full Name: gastrula zinc finger protein XlCGF57.1-like
Gene Type: protein_coding
Species: Takifugu_rubripes
Status: putative
Strand: Plus strand
Length: 17665 bases
Position: chr11:9616477-9634141
Accession: 105417105
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTRUP00000012767	zf-C2H2	PF00096.26	1.3e-54	1	8
ENSTRUP00000012767	zf-C2H2	PF00096.26	1.3e-54	2	8
ENSTRUP00000012767	zf-C2H2	PF00096.26	1.3e-54	3	8
ENSTRUP00000012767	zf-C2H2	PF00096.26	1.3e-54	4	8
ENSTRUP00000012767	zf-C2H2	PF00096.26	1.3e-54	5	8
ENSTRUP00000012767	zf-C2H2	PF00096.26	1.3e-54	6	8
ENSTRUP00000012767	zf-C2H2	PF00096.26	1.3e-54	7	8
ENSTRUP00000012767	zf-C2H2	PF00096.26	1.3e-54	8	8
ENSTRUP00000012764	zf-C2H2	PF00096.26	1.7e-38	1	6
ENSTRUP00000012764	zf-C2H2	PF00096.26	1.7e-38	2	6
ENSTRUP00000012764	zf-C2H2	PF00096.26	1.7e-38	3	6
ENSTRUP00000012764	zf-C2H2	PF00096.26	1.7e-38	4	6
ENSTRUP00000012764	zf-C2H2	PF00096.26	1.7e-38	5	6
ENSTRUP00000012764	zf-C2H2	PF00096.26	1.7e-38	6	6
ENSTRUP00000050196	zf-C2H2	PF00096.26	4.8e-32	1	5
ENSTRUP00000050196	zf-C2H2	PF00096.26	4.8e-32	2	5
ENSTRUP00000050196	zf-C2H2	PF00096.26	4.8e-32	3	5
ENSTRUP00000050196	zf-C2H2	PF00096.26	4.8e-32	4	5
ENSTRUP00000050196	zf-C2H2	PF00096.26	4.8e-32	5	5
ENSTRUP00000012767	zf-met	PF12874.7	3.9e-13	1	1
ENSTRUP00000050196	zf-met	PF12874.7	3.2e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTRUT00000012828	-	1443	-	ENSTRUP00000012767	480 (aa)	-	H2SK34
ENSTRUT00000051498	-	3559	XM_011608707	ENSTRUP00000050196	512 (aa)	XP_011607009	-
ENSTRUT00000012825	-	918	-	ENSTRUP00000012764	305 (aa)	-	H2SK31

Gene Model

Click here to download ENSTRUG00000005321's gene model file

Pathways

Pathway ID	Pathway Name	Source
tru05168	Herpes simplex virus 1 infection	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSTRUG00000005321's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTRUG00000005321	-	93	45.968	ENSTRUG00000003277	zbtb17	98	46.809
ENSTRUG00000005321	-	99	41.270	ENSTRUG00000022206	-	63	40.000
ENSTRUG00000005321	-	94	41.284	ENSTRUG00000004525	gfi1b	54	43.089
ENSTRUG00000005321	-	96	45.274	ENSTRUG00000023925	-	68	43.836
ENSTRUG00000005321	-	95	32.083	ENSTRUG00000001452	PRDM15	60	33.503
ENSTRUG00000005321	-	94	36.842	ENSTRUG00000000419	sna2	90	35.526
ENSTRUG00000005321	-	96	46.914	ENSTRUG00000022905	-	96	45.614
ENSTRUG00000005321	-	94	46.371	ENSTRUG00000024073	-	63	44.043
ENSTRUG00000005321	-	95	46.296	ENSTRUG00000022515	-	60	42.767
ENSTRUG00000005321	-	96	40.928	ENSTRUG00000019940	-	52	40.161
ENSTRUG00000005321	-	95	43.421	ENSTRUG00000007998	mecom	69	37.383
ENSTRUG00000005321	-	96	44.876	ENSTRUG00000021765	-	60	45.763
ENSTRUG00000005321	-	94	45.255	ENSTRUG00000025881	-	66	45.255
ENSTRUG00000005321	-	96	42.857	ENSTRUG00000013906	-	96	45.622
ENSTRUG00000005321	-	95	45.714	ENSTRUG00000021675	-	81	45.714
ENSTRUG00000005321	-	97	44.554	ENSTRUG00000017456	znf236	80	40.141
ENSTRUG00000005321	-	97	44.275	ENSTRUG00000015687	-	94	44.595
ENSTRUG00000005321	-	93	40.789	ENSTRUG00000012719	-	50	40.789
ENSTRUG00000005321	-	94	38.014	ENSTRUG00000012157	-	90	38.014
ENSTRUG00000005321	-	95	38.931	ENSTRUG00000022666	-	58	38.298
ENSTRUG00000005321	-	94	39.024	ENSTRUG00000011637	scrt1b	65	36.232
ENSTRUG00000005321	-	99	35.366	ENSTRUG00000015366	patz1	59	36.179
ENSTRUG00000005321	-	94	53.061	ENSTRUG00000007410	sall4	56	53.061
ENSTRUG00000005321	-	96	36.278	ENSTRUG00000022843	-	69	41.781
ENSTRUG00000005321	-	93	48.800	ENSTRUG00000005180	-	95	48.800
ENSTRUG00000005321	-	88	50.000	ENSTRUG00000022969	-	72	50.000
ENSTRUG00000005321	-	94	41.026	ENSTRUG00000022076	-	94	38.636
ENSTRUG00000005321	-	99	39.004	ENSTRUG00000022066	-	95	36.667
ENSTRUG00000005321	-	95	45.374	ENSTRUG00000019483	-	96	44.628
ENSTRUG00000005321	-	95	36.842	ENSTRUG00000025597	znf646	80	37.600
ENSTRUG00000005321	-	96	33.990	ENSTRUG00000009203	zbtb41	51	33.990
ENSTRUG00000005321	-	94	49.351	ENSTRUG00000024009	-	93	51.020
ENSTRUG00000005321	-	96	42.683	ENSTRUG00000024008	-	56	42.683
ENSTRUG00000005321	-	98	41.935	ENSTRUG00000020582	-	95	41.564
ENSTRUG00000005321	-	95	49.091	ENSTRUG00000012273	-	85	42.994
ENSTRUG00000005321	-	94	41.584	ENSTRUG00000013850	prdm5	76	39.394
ENSTRUG00000005321	-	96	47.368	ENSTRUG00000022919	-	81	43.684
ENSTRUG00000005321	-	95	47.154	ENSTRUG00000003111	-	98	47.154
ENSTRUG00000005321	-	94	42.763	ENSTRUG00000023491	-	65	42.763
ENSTRUG00000005321	-	94	42.308	ENSTRUG00000022990	sna1	64	36.538
ENSTRUG00000005321	-	93	40.789	ENSTRUG00000019558	-	52	40.789
ENSTRUG00000005321	-	95	36.538	ENSTRUG00000006180	si:ch211-216l23.1	85	36.538
ENSTRUG00000005321	-	94	48.413	ENSTRUG00000025189	-	81	48.413
ENSTRUG00000005321	-	96	35.878	ENSTRUG00000005241	gtf3ab	81	35.878
ENSTRUG00000005321	-	93	40.789	ENSTRUG00000007620	scrt2	51	36.585
ENSTRUG00000005321	-	95	38.415	ENSTRUG00000011097	-	50	35.859
ENSTRUG00000005321	-	99	43.455	ENSTRUG00000006896	-	90	43.455
ENSTRUG00000005321	-	96	47.059	ENSTRUG00000000995	-	70	47.059
ENSTRUG00000005321	-	91	50.000	ENSTRUG00000003369	sall3b	57	50.000
ENSTRUG00000005321	-	95	40.206	ENSTRUG00000020495	si:dkey-89b17.4	73	40.206
ENSTRUG00000005321	-	99	43.043	ENSTRUG00000001268	-	93	42.162
ENSTRUG00000005321	-	96	44.048	ENSTRUG00000007022	-	69	46.939
ENSTRUG00000005321	-	98	39.286	ENSTRUG00000025588	snai2	62	35.172
ENSTRUG00000005321	-	96	35.811	ENSTRUG00000019685	znf319b	85	35.811
ENSTRUG00000005321	-	97	48.000	ENSTRUG00000011385	znf341	53	52.000
ENSTRUG00000005321	-	95	37.634	ENSTRUG00000005880	-	56	40.936
ENSTRUG00000005321	-	96	37.748	ENSTRUG00000014476	-	88	33.482
ENSTRUG00000005321	-	95	35.047	ENSTRUG00000020208	-	62	46.000
ENSTRUG00000005321	-	98	39.744	ENSTRUG00000003454	-	94	38.261

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTRUG00000005321	-	94	70.614	ENSAPOG00000013511	-	93	58.524	Acanthochromis_polyacanthus
ENSTRUG00000005321	-	96	38.693	ENSAPOG00000004328	-	90	41.897	Acanthochromis_polyacanthus
ENSTRUG00000005321	-	96	40.212	ENSACIG00000010739	-	81	40.513	Amphilophus_citrinellus
ENSTRUG00000005321	-	99	38.652	ENSAOCG00000007045	-	89	38.443	Amphiprion_ocellaris
ENSTRUG00000005321	-	95	70.614	ENSAPEG00000016483	-	96	84.274	Amphiprion_percula
ENSTRUG00000005321	-	99	38.177	ENSAPEG00000001596	-	81	39.764	Amphiprion_percula
ENSTRUG00000005321	-	99	39.362	ENSATEG00000006085	-	91	37.783	Anabas_testudineus
ENSTRUG00000005321	-	98	45.455	ENSACAG00000000082	-	99	45.026	Anolis_carolinensis
ENSTRUG00000005321	-	97	42.857	ENSACAG00000025537	-	96	48.684	Anolis_carolinensis
ENSTRUG00000005321	-	96	47.977	ENSAMXG00000033013	-	84	47.977	Astyanax_mexicanus
ENSTRUG00000005321	-	99	45.098	ENSAMXG00000012873	-	96	46.667	Astyanax_mexicanus
ENSTRUG00000005321	-	96	47.170	ENSAMXG00000035949	-	85	47.410	Astyanax_mexicanus
ENSTRUG00000005321	-	95	45.126	ENSAMXG00000032237	-	96	42.442	Astyanax_mexicanus
ENSTRUG00000005321	-	96	47.768	ENSAMXG00000035145	-	65	48.684	Astyanax_mexicanus
ENSTRUG00000005321	-	96	47.059	ENSAMXG00000036257	-	99	44.488	Astyanax_mexicanus
ENSTRUG00000005321	-	99	41.795	ENSAMXG00000026143	-	96	44.534	Astyanax_mexicanus
ENSTRUG00000005321	-	100	38.689	ENSCVAG00000011235	-	91	40.755	Cyprinodon_variegatus
ENSTRUG00000005321	-	98	43.158	ENSELUG00000021287	-	94	42.564	Esox_lucius
ENSTRUG00000005321	-	97	39.826	ENSELUG00000013844	-	87	41.071	Esox_lucius
ENSTRUG00000005321	-	95	47.541	ENSELUG00000013357	-	85	47.541	Esox_lucius
ENSTRUG00000005321	-	96	64.912	ENSFHEG00000019915	-	99	53.244	Fundulus_heteroclitus
ENSTRUG00000005321	-	99	44.712	ENSGMOG00000003238	-	99	50.649	Gadus_morhua
ENSTRUG00000005321	-	97	39.777	ENSGAFG00000012977	-	95	39.286	Gambusia_affinis
ENSTRUG00000005321	-	96	64.912	ENSGAFG00000003150	-	84	75.806	Gambusia_affinis
ENSTRUG00000005321	-	98	47.500	ENSIPUG00000021556	-	98	46.296	Ictalurus_punctatus
ENSTRUG00000005321	-	98	47.482	ENSIPUG00000004428	-	83	47.482	Ictalurus_punctatus
ENSTRUG00000005321	-	96	42.105	ENSIPUG00000006916	-	85	43.388	Ictalurus_punctatus
ENSTRUG00000005321	-	97	40.210	ENSKMAG00000004988	-	92	37.260	Kryptolebias_marmoratus
ENSTRUG00000005321	-	96	43.810	ENSLOCG00000014366	-	97	40.833	Lepisosteus_oculatus
ENSTRUG00000005321	-	94	42.857	ENSLOCG00000014144	-	100	42.857	Lepisosteus_oculatus
ENSTRUG00000005321	-	96	72.034	ENSMAMG00000016542	-	99	87.903	Mastacembelus_armatus
ENSTRUG00000005321	-	96	43.478	ENSMAMG00000019301	-	95	45.455	Mastacembelus_armatus
ENSTRUG00000005321	-	96	41.566	ENSMMOG00000009852	-	99	38.889	Mola_mola
ENSTRUG00000005321	-	98	82.941	ENSMALG00000005554	-	100	82.456	Monopterus_albus
ENSTRUG00000005321	-	93	47.253	ENSOCUG00000005876	-	100	47.253	Oryctolagus_cuniculus
ENSTRUG00000005321	-	95	44.620	ENSPKIG00000006616	-	100	52.809	Paramormyrops_kingsleyae
ENSTRUG00000005321	-	95	38.298	ENSPMGG00000017633	-	95	35.499	Periophthalmus_magnuspinnatus
ENSTRUG00000005321	-	97	40.226	ENSPFOG00000010682	-	95	40.957	Poecilia_formosa
ENSTRUG00000005321	-	96	38.776	ENSPLAG00000002892	-	73	41.549	Poecilia_latipinna
ENSTRUG00000005321	-	97	40.226	ENSPMEG00000001399	-	90	41.107	Poecilia_mexicana
ENSTRUG00000005321	-	97	39.738	ENSPREG00000002582	-	69	38.372	Poecilia_reticulata
ENSTRUG00000005321	-	97	39.925	ENSPREG00000001386	-	90	41.107	Poecilia_reticulata
ENSTRUG00000005321	-	99	42.508	ENSPNAG00000000219	-	92	42.508	Pygocentrus_nattereri
ENSTRUG00000005321	-	95	44.660	ENSPNAG00000015116	-	70	44.660	Pygocentrus_nattereri
ENSTRUG00000005321	-	95	42.606	ENSPNAG00000025570	-	80	42.606	Pygocentrus_nattereri
ENSTRUG00000005321	-	97	54.478	ENSSFOG00015006108	-	99	55.870	Scleropages_formosus
ENSTRUG00000005321	-	99	43.216	ENSSMAG00000009115	-	99	52.000	Scophthalmus_maximus
ENSTRUG00000005321	-	96	71.930	ENSSDUG00000002195	-	99	87.097	Seriola_dumerili
ENSTRUG00000005321	-	99	39.007	ENSSDUG00000006463	-	91	39.007	Seriola_dumerili
ENSTRUG00000005321	-	95	44.970	ENSSLDG00000006724	-	99	40.517	Seriola_lalandi_dorsalis
ENSTRUG00000005321	-	98	43.750	ENSSLDG00000020727	-	97	48.485	Seriola_lalandi_dorsalis
ENSTRUG00000005321	-	95	38.929	ENSSPAG00000012960	-	88	39.841	Stegastes_partitus
ENSTRUG00000005321	-	94	53.247	ENSSPAG00000021008	-	96	45.361	Stegastes_partitus
ENSTRUG00000005321	-	96	41.549	ENSTNIG00000008200	-	99	43.333	Tetraodon_nigroviridis
ENSTRUG00000005321	-	96	47.826	ENSTNIG00000000320	-	100	47.917	Tetraodon_nigroviridis
ENSTRUG00000005321	-	99	40.678	ENSXETG00000006575	znf420	77	50.000	Xenopus_tropicalis
ENSTRUG00000005321	-	99	54.305	ENSXCOG00000009665	-	86	58.242	Xiphophorus_couchianus
ENSTRUG00000005321	-	97	39.925	ENSXMAG00000028625	-	90	41.502	Xiphophorus_maculatus