EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSTRUG00000005466 (Gene tree)
Gene ID
101077690
Gene Symbol
-
Alias
C2orf12|DKFZp564H0764|HCC-4|MSSP-1|MSSP-2|MSSP-3|SCR2|YC1
Full Name
RNA binding motif single stranded interacting protein 1
Gene Type
protein_coding
Species
Takifugu_rubripes
Status
putative
Strand
Plus strand
Length
12914 bases
Position
chr1:15976039-15988952
Accession
101077690
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSTRUP00000013123RRM_1PF00076.222.1e-3112
ENSTRUP00000013123RRM_1PF00076.222.1e-3122
ENSTRUP00000052778RRM_1PF00076.222.7e-3112
ENSTRUP00000052778RRM_1PF00076.222.7e-3122
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSTRUT00000013184-4504XM_003961964ENSTRUP00000013123397 (aa)XP_003962013H2SL38
ENSTRUT00000051555-4609-ENSTRUP00000052778432 (aa)--
Gene Model
Click here to download ENSTRUG00000005466's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSTRUG00000005466's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSTRUG00000005466-5036.782ENSTRUG00000005907pabpc45836.782
ENSTRUG00000005466-7569.079ENSTRUG00000007482-8065.861
ENSTRUG00000005466-9961.616ENSTRUG00000017155rbms1a9960.859
ENSTRUG00000005466-8965.084ENSTRUG00000006839rbms2b9364.972
ENSTRUG00000005466-8770.940ENSTRUG00000008492rbms2a8870.621
ENSTRUG00000005466-7033.750ENSTRUG00000014225celf3b9033.750
ENSTRUG00000005466-8766.935ENSTRUG00000021719RBMS38666.935
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSTRUG00000005466-9673.316ENSG00000153250RBMS18489.720Homo_sapiens
ENSTRUG00000005466-9963.613ENSAPOG00000013761rbms1a9962.595Acanthochromis_polyacanthus
ENSTRUG00000005466-10085.139ENSAPOG00000024437-10083.375Acanthochromis_polyacanthus
ENSTRUG00000005466-9571.875ENSAMEG00000012661RBMS19273.669Ailuropoda_melanoleuca
ENSTRUG00000005466-10080.353ENSACIG00000021498RBMS18986.286Amphilophus_citrinellus
ENSTRUG00000005466-9957.107ENSACIG00000000113rbms1a9956.853Amphilophus_citrinellus
ENSTRUG00000005466-10084.383ENSAOCG00000014482-10083.123Amphiprion_ocellaris
ENSTRUG00000005466-9963.613ENSAOCG00000010066rbms1a9962.595Amphiprion_ocellaris
ENSTRUG00000005466-9963.613ENSAPEG00000023563rbms1a9963.104Amphiprion_percula
ENSTRUG00000005466-10084.383ENSAPEG00000018371-10083.123Amphiprion_percula
ENSTRUG00000005466-10084.383ENSATEG00000018573RBMS110082.872Anabas_testudineus
ENSTRUG00000005466-9961.832ENSATEG00000015450rbms1a9960.814Anabas_testudineus
ENSTRUG00000005466-9574.474ENSAPLG00000007282RBMS18976.487Anas_platyrhynchos
ENSTRUG00000005466-9776.215ENSACAG00000011984RBMS18271.859Anolis_carolinensis
ENSTRUG00000005466-8074.224ENSANAG00000024424RBMS110074.224Aotus_nancymaae
ENSTRUG00000005466-10081.360ENSACLG00000013048RBMS110078.643Astatotilapia_calliptera
ENSTRUG00000005466-9962.341ENSACLG00000021512rbms1a9962.087Astatotilapia_calliptera
ENSTRUG00000005466-10071.285ENSAMXG00000002146rbms1a9969.521Astyanax_mexicanus
ENSTRUG00000005466-10077.834ENSAMXG00000009969RBMS110076.574Astyanax_mexicanus
ENSTRUG00000005466-9772.890ENSBTAG00000005180RBMS110070.270Bos_taurus
ENSTRUG00000005466-9771.026ENSCJAG00000012871-9372.521Callithrix_jacchus
ENSTRUG00000005466-9673.057ENSCJAG00000014861-8974.788Callithrix_jacchus
ENSTRUG00000005466-9766.923ENSCJAG00000022465-9569.688Callithrix_jacchus
ENSTRUG00000005466-9772.890ENSCAFG00000009922RBMS110070.270Canis_familiaris
ENSTRUG00000005466-9871.429ENSCAFG00020006120RBMS110067.139Canis_lupus_dingo
ENSTRUG00000005466-9672.280ENSCHIG00000023380RBMS18774.504Capra_hircus
ENSTRUG00000005466-9673.316ENSTSYG00000005584RBMS19575.071Carlito_syrichta
ENSTRUG00000005466-9672.539ENSCPOG00000012310RBMS19371.545Cavia_porcellus
ENSTRUG00000005466-9673.057ENSCCAG00000033841RBMS19175.354Cebus_capucinus
ENSTRUG00000005466-9773.196ENSCATG00000043032RBMS19575.071Cercocebus_atys
ENSTRUG00000005466-9772.423ENSCLAG00000003031RBMS19571.274Chinchilla_lanigera
ENSTRUG00000005466-9673.316ENSCSAG00000015687RBMS18775.637Chlorocebus_sabaeus
ENSTRUG00000005466-10074.321ENSCPBG00000026455RBMS110072.840Chrysemys_picta_bellii
ENSTRUG00000005466-9772.680ENSCANG00000042152RBMS19575.071Colobus_angolensis_palliatus
ENSTRUG00000005466-9672.021ENSCGRG00001022833Rbms110066.430Cricetulus_griseus_chok1gshd
ENSTRUG00000005466-9672.021ENSCGRG00000008824Rbms19371.003Cricetulus_griseus_crigri
ENSTRUG00000005466-9962.087ENSCSEG00000000889rbms1a9961.069Cynoglossus_semilaevis
ENSTRUG00000005466-10083.879ENSCSEG00000010652RBMS110083.879Cynoglossus_semilaevis
ENSTRUG00000005466-10080.353ENSCVAG00000002027RBMS110077.582Cyprinodon_variegatus
ENSTRUG00000005466-9962.087ENSCVAG00000014698rbms1a9961.069Cyprinodon_variegatus
ENSTRUG00000005466-10070.426ENSDARG00000074023rbms1a9968.672Danio_rerio
ENSTRUG00000005466-8872.554ENSDNOG00000040691RBMS19572.358Dasypus_novemcinctus
ENSTRUG00000005466-9672.539ENSDORG00000007103Rbms19571.545Dipodomys_ordii
ENSTRUG00000005466-9563.421ENSETEG00000012135RBMS19364.589Echinops_telfairi
ENSTRUG00000005466-9773.146ENSEASG00005023132RBMS110070.516Equus_asinus_asinus
ENSTRUG00000005466-9673.057ENSECAG00000019894RBMS110067.376Equus_caballus
ENSTRUG00000005466-7573.494ENSEEUG00000005628RBMS16690.000Erinaceus_europaeus
ENSTRUG00000005466-10064.912ENSELUG00000018923rbms1a10063.910Esox_lucius
ENSTRUG00000005466-9669.554ENSELUG00000019328RBMS18771.714Esox_lucius
ENSTRUG00000005466-9672.539ENSFCAG00000012524RBMS19574.221Felis_catus
ENSTRUG00000005466-8876.705ENSFALG00000004440RBMS19576.487Ficedula_albicollis
ENSTRUG00000005466-10070.823ENSFDAG00000015692RBMS19371.545Fukomys_damarensis
ENSTRUG00000005466-10079.345ENSFHEG00000000720RBMS110078.338Fundulus_heteroclitus
ENSTRUG00000005466-9961.832ENSFHEG00000005662rbms1a9769.417Fundulus_heteroclitus
ENSTRUG00000005466-8663.662ENSGMOG00000000525rbms1a9963.662Gadus_morhua
ENSTRUG00000005466-9774.425ENSGALG00000011132RBMS19577.054Gallus_gallus
ENSTRUG00000005466-10080.353ENSGAFG00000007708RBMS110082.116Gambusia_affinis
ENSTRUG00000005466-8664.535ENSGAFG00000011633rbms1a9564.162Gambusia_affinis
ENSTRUG00000005466-10083.375ENSGACG00000005671RBMS110082.872Gasterosteus_aculeatus
ENSTRUG00000005466-9060.372ENSGACG00000015174rbms1a9564.412Gasterosteus_aculeatus
ENSTRUG00000005466-10074.815ENSGAGG00000007866RBMS110072.840Gopherus_agassizii
ENSTRUG00000005466-9573.684ENSGGOG00000001264RBMS19575.071Gorilla_gorilla
ENSTRUG00000005466-9772.123ENSGGOG00000043756-10068.382Gorilla_gorilla
ENSTRUG00000005466-9962.341ENSHBUG00000004802rbms1a9962.087Haplochromis_burtoni
ENSTRUG00000005466-9481.551ENSHBUG00000004516RBMS19384.756Haplochromis_burtoni
ENSTRUG00000005466-10070.574ENSHGLG00000010387RBMS19371.274Heterocephalus_glaber_female
ENSTRUG00000005466-10070.574ENSHGLG00100014105RBMS19371.274Heterocephalus_glaber_male
ENSTRUG00000005466-9961.578ENSHCOG00000020097rbms1a9960.560Hippocampus_comes
ENSTRUG00000005466-10079.597ENSHCOG00000016668RBMS110078.338Hippocampus_comes
ENSTRUG00000005466-10077.582ENSIPUG00000014677RBMS110076.322Ictalurus_punctatus
ENSTRUG00000005466-10072.292ENSIPUG00000010131RBMS19970.529Ictalurus_punctatus
ENSTRUG00000005466-9672.798ENSSTOG00000012501RBMS19371.816Ictidomys_tridecemlineatus
ENSTRUG00000005466-9672.280ENSJJAG00000016543Rbms19571.274Jaculus_jaculus
ENSTRUG00000005466-9961.675ENSKMAG00000011839-9960.660Kryptolebias_marmoratus
ENSTRUG00000005466-10080.856ENSKMAG00000013911RBMS110079.597Kryptolebias_marmoratus
ENSTRUG00000005466-10084.131ENSLBEG00000005787RBMS110082.872Labrus_bergylta
ENSTRUG00000005466-9962.341ENSLBEG00000025962rbms1a9961.323Labrus_bergylta
ENSTRUG00000005466-10073.267ENSLACG00000004324RBMS19973.267Latimeria_chalumnae
ENSTRUG00000005466-10077.834ENSLOCG00000008622rbms1a10076.574Lepisosteus_oculatus
ENSTRUG00000005466-9572.632ENSLAFG00000017217RBMS19274.504Loxodonta_africana
ENSTRUG00000005466-9773.196ENSMFAG00000000274RBMS19575.071Macaca_fascicularis
ENSTRUG00000005466-9773.196ENSMMUG00000016825RBMS19275.637Macaca_mulatta
ENSTRUG00000005466-9773.196ENSMNEG00000039425RBMS19575.071Macaca_nemestrina
ENSTRUG00000005466-9772.938ENSMLEG00000031517RBMS19574.788Mandrillus_leucophaeus
ENSTRUG00000005466-9962.341ENSMAMG00000005018rbms1a9961.323Mastacembelus_armatus
ENSTRUG00000005466-10083.123ENSMAMG00000003159-10081.864Mastacembelus_armatus
ENSTRUG00000005466-8284.663ENSMZEG00005007313RBMS19284.756Maylandia_zebra
ENSTRUG00000005466-9962.341ENSMZEG00005005661rbms1a9962.087Maylandia_zebra
ENSTRUG00000005466-8877.273ENSMGAG00000011054RBMS110075.988Meleagris_gallopavo
ENSTRUG00000005466-9672.280ENSMAUG00000008550Rbms110066.903Mesocricetus_auratus
ENSTRUG00000005466-9672.539ENSMICG00000008325RBMS19274.788Microcebus_murinus
ENSTRUG00000005466-9671.503ENSMOCG00000022617Rbms110066.194Microtus_ochrogaster
ENSTRUG00000005466-9958.779ENSMMOG00000018249rbms1a9957.761Mola_mola
ENSTRUG00000005466-10088.413ENSMMOG00000003707RBMS110087.406Mola_mola
ENSTRUG00000005466-9674.611ENSMODG00000005250RBMS18776.836Monodelphis_domestica
ENSTRUG00000005466-9682.677ENSMALG00000015715-10081.612Monopterus_albus
ENSTRUG00000005466-9962.087ENSMALG00000014235rbms1a9961.069Monopterus_albus
ENSTRUG00000005466-9572.251MGP_CAROLIEiJ_G0023586Rbms110066.430Mus_caroli
ENSTRUG00000005466-9571.990ENSMUSG00000026970Rbms110066.194Mus_musculus
ENSTRUG00000005466-9969.975MGP_PahariEiJ_G0025037Rbms110068.305Mus_pahari
ENSTRUG00000005466-9571.990MGP_SPRETEiJ_G0024508Rbms19673.016Mus_spretus
ENSTRUG00000005466-9669.403ENSMPUG00000000539RBMS18771.274Mustela_putorius_furo
ENSTRUG00000005466-9568.844ENSMLUG00000008762RBMS18870.350Myotis_lucifugus
ENSTRUG00000005466-9671.762ENSNGAG00000013636Rbms18773.938Nannospalax_galili
ENSTRUG00000005466-8879.943ENSNBRG00000015151RBMS19580.000Neolamprologus_brichardi
ENSTRUG00000005466-8863.429ENSNBRG00000020217rbms1a9563.143Neolamprologus_brichardi
ENSTRUG00000005466-9673.316ENSNLEG00000001667RBMS19575.071Nomascus_leucogenys
ENSTRUG00000005466-8065.217ENSMEUG00000000746RBMS110065.217Notamacropus_eugenii
ENSTRUG00000005466-9666.580ENSOPRG00000012431RBMS18768.272Ochotona_princeps
ENSTRUG00000005466-9672.280ENSODEG00000013934RBMS19571.274Octodon_degus
ENSTRUG00000005466-9961.832ENSONIG00000003329rbms1a9962.850Oreochromis_niloticus
ENSTRUG00000005466-10081.612ENSONIG00000008934RBMS110079.397Oreochromis_niloticus
ENSTRUG00000005466-5451.029ENSOANG00000004477-9951.639Ornithorhynchus_anatinus
ENSTRUG00000005466-9575.263ENSOANG00000006166RBMS18977.119Ornithorhynchus_anatinus
ENSTRUG00000005466-9573.158ENSOCUG00000017365RBMS18375.071Oryctolagus_cuniculus
ENSTRUG00000005466-10076.633ENSORLG00000016818RBMS19976.131Oryzias_latipes
ENSTRUG00000005466-9960.560ENSORLG00000003917rbms1a9959.542Oryzias_latipes
ENSTRUG00000005466-10076.633ENSORLG00020022335RBMS19976.131Oryzias_latipes_hni
ENSTRUG00000005466-9960.305ENSORLG00020018663rbms1a9959.288Oryzias_latipes_hni
ENSTRUG00000005466-10077.136ENSORLG00015018208RBMS19976.633Oryzias_latipes_hsok
ENSTRUG00000005466-9960.560ENSORLG00015016556rbms1a9959.542Oryzias_latipes_hsok
ENSTRUG00000005466-10077.834ENSOMEG00000002394RBMS19977.078Oryzias_melastigma
ENSTRUG00000005466-8874.859ENSOGAG00000002900RBMS19574.648Otolemur_garnettii
ENSTRUG00000005466-9672.280ENSOARG00000006870RBMS19570.889Ovis_aries
ENSTRUG00000005466-9573.684ENSPPAG00000040083RBMS19275.637Pan_paniscus
ENSTRUG00000005466-8872.443ENSPPAG00000036520-9372.238Pan_paniscus
ENSTRUG00000005466-9672.539ENSPPRG00000005040RBMS19574.221Panthera_pardus
ENSTRUG00000005466-9572.895ENSPTIG00000021240RBMS19574.221Panthera_tigris_altaica
ENSTRUG00000005466-9770.180ENSPTRG00000039358-9968.696Pan_troglodytes
ENSTRUG00000005466-9673.316ENSPTRG00000052304RBMS19275.637Pan_troglodytes
ENSTRUG00000005466-9773.196ENSPANG00000001383RBMS19275.637Papio_anubis
ENSTRUG00000005466-10075.063ENSPKIG00000012818rbms1a10074.055Paramormyrops_kingsleyae
ENSTRUG00000005466-10076.884ENSPKIG00000001498rbms1a10075.126Paramormyrops_kingsleyae
ENSTRUG00000005466-9575.000ENSPSIG00000010240RBMS18776.771Pelodiscus_sinensis
ENSTRUG00000005466-8580.952ENSPMGG00000006310RBMS19676.000Periophthalmus_magnuspinnatus
ENSTRUG00000005466-9958.270ENSPMGG00000004341rbms1a9957.506Periophthalmus_magnuspinnatus
ENSTRUG00000005466-9671.762ENSPEMG00000009449Rbms19074.504Peromyscus_maniculatus_bairdii
ENSTRUG00000005466-10073.710ENSPCIG00000018405RBMS110072.482Phascolarctos_cinereus
ENSTRUG00000005466-9962.087ENSPFOG00000016116rbms1a9961.069Poecilia_formosa
ENSTRUG00000005466-10080.605ENSPFOG00000017483RBMS110082.368Poecilia_formosa
ENSTRUG00000005466-9962.087ENSPLAG00000013864rbms1a9961.069Poecilia_latipinna
ENSTRUG00000005466-10080.856ENSPLAG00000000920RBMS110082.620Poecilia_latipinna
ENSTRUG00000005466-10080.605ENSPMEG00000015838RBMS110082.368Poecilia_mexicana
ENSTRUG00000005466-9962.087ENSPMEG00000016185rbms1a9961.069Poecilia_mexicana
ENSTRUG00000005466-10081.108ENSPREG00000008146RBMS110082.620Poecilia_reticulata
ENSTRUG00000005466-9962.087ENSPREG00000020161rbms1a9961.069Poecilia_reticulata
ENSTRUG00000005466-9670.647ENSPPYG00000012879-8772.629Pongo_abelii
ENSTRUG00000005466-9668.135ENSPCAG00000009673RBMS18769.972Procavia_capensis
ENSTRUG00000005466-9672.539ENSPCOG00000027294RBMS19574.221Propithecus_coquereli
ENSTRUG00000005466-9662.694ENSPVAG00000010429RBMS18764.023Pteropus_vampyrus
ENSTRUG00000005466-10080.856ENSPNYG00000002643RBMS110078.643Pundamilia_nyererei
ENSTRUG00000005466-9771.244ENSPNAG00000010225rbms1a8972.571Pygocentrus_nattereri
ENSTRUG00000005466-10079.093ENSPNAG00000023479RBMS110077.834Pygocentrus_nattereri
ENSTRUG00000005466-9571.466ENSRNOG00000008482Rbms19069.863Rattus_norvegicus
ENSTRUG00000005466-9772.751ENSRBIG00000044262RBMS110067.849Rhinopithecus_bieti
ENSTRUG00000005466-9773.196ENSRROG00000043108RBMS110068.085Rhinopithecus_roxellana
ENSTRUG00000005466-9571.762ENSSBOG00000034705RBMS19575.354Saimiri_boliviensis_boliviensis
ENSTRUG00000005466-9674.611ENSSHAG00000012271RBMS110071.884Sarcophilus_harrisii
ENSTRUG00000005466-10076.826ENSSFOG00015022929rbms110075.819Scleropages_formosus
ENSTRUG00000005466-8874.425ENSSFOG00015014493rbms1a9574.571Scleropages_formosus
ENSTRUG00000005466-10084.383ENSSMAG00000012152RBMS19683.123Scophthalmus_maximus
ENSTRUG00000005466-8665.698ENSSMAG00000012722rbms1a9565.318Scophthalmus_maximus
ENSTRUG00000005466-9963.359ENSSDUG00000020602rbms1a9962.341Seriola_dumerili
ENSTRUG00000005466-10085.139ENSSDUG00000018803RBMS110083.879Seriola_dumerili
ENSTRUG00000005466-10085.390ENSSLDG00000016556RBMS110084.131Seriola_lalandi_dorsalis
ENSTRUG00000005466-9963.359ENSSLDG00000009495rbms1a9962.341Seriola_lalandi_dorsalis
ENSTRUG00000005466-8069.397ENSSARG00000011085RBMS17172.864Sorex_araneus
ENSTRUG00000005466-8877.273ENSSPUG00000017163RBMS19477.054Sphenodon_punctatus
ENSTRUG00000005466-9963.359ENSSPAG00000005371rbms1a9962.341Stegastes_partitus
ENSTRUG00000005466-10085.642ENSSPAG00000000059RBMS110084.383Stegastes_partitus
ENSTRUG00000005466-9771.100ENSSSCG00000015888RBMS110069.779Sus_scrofa
ENSTRUG00000005466-9673.834ENSTGUG00000006606RBMS18776.487Taeniopygia_guttata
ENSTRUG00000005466-9491.200ENSTNIG00000016496RBMS19794.571Tetraodon_nigroviridis
ENSTRUG00000005466-8762.751ENSTNIG00000009477rbms1a10061.468Tetraodon_nigroviridis
ENSTRUG00000005466-9565.789ENSTBEG00000016156RBMS19367.139Tupaia_belangeri
ENSTRUG00000005466-9572.895ENSTTRG00000011058RBMS19374.576Tursiops_truncatus
ENSTRUG00000005466-9572.632ENSUAMG00000022331RBMS18774.504Ursus_americanus
ENSTRUG00000005466-9572.632ENSUMAG00000008605RBMS19174.504Ursus_maritimus
ENSTRUG00000005466-9174.862ENSVPAG00000002716RBMS18777.744Vicugna_pacos
ENSTRUG00000005466-9868.627ENSVVUG00000018682RBMS19574.504Vulpes_vulpes
ENSTRUG00000005466-9669.689ENSXETG00000016204rbms19571.429Xenopus_tropicalis
ENSTRUG00000005466-8883.095ENSXCOG00000000211RBMS19582.857Xiphophorus_couchianus
ENSTRUG00000005466-9959.288ENSXCOG00000001659rbms1a9958.270Xiphophorus_couchianus
ENSTRUG00000005466-10080.101ENSXMAG00000011405RBMS110081.864Xiphophorus_maculatus
ENSTRUG00000005466-9961.832ENSXMAG00000001802rbms1a9960.814Xiphophorus_maculatus

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