EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTRUG00000005552 (Gene tree)
Gene ID: 101079923
Gene Symbol: gnl3
Alias: id:ibd2914|nstm|nucleostemin|wu:fb38a04|wu:fc55d07|zgc:123093
Full Name: G protein nucleolar 3
Gene Type: protein_coding
Species: Takifugu_rubripes
Status: putative
Strand: Plus strand
Length: 7802 bases
Position: chr19:11747549-11755350
Accession: 101079923
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTRUP00000051888	GN3L_Grn1	PF08701.11	3e-23	1	1
ENSTRUP00000013363	GN3L_Grn1	PF08701.11	3e-23	1	1
ENSTRUP00000013363	MMR_HSR1	PF01926.23	2.6e-15	1	1
ENSTRUP00000051888	MMR_HSR1	PF01926.23	2.7e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTRUT00000052850	-	5689	XM_003973634	ENSTRUP00000051888	551 (aa)	XP_003973683	UPI000298FC75
ENSTRUT00000013425	-	5248	-	ENSTRUP00000013363	539 (aa)	-	H2SLS7

Gene Model

Click here to download ENSTRUG00000005552's gene model file

Pathways

Pathway ID	Pathway Name	Source
tru03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSTRUG00000005552's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTRUG00000005552	gnl3	75	39.163	ENSTRUG00000013131	gnl3l	71	39.163

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTRUG00000005552	gnl3	99	43.571	ENSG00000163938	GNL3	99	55.634	Homo_sapiens
ENSTRUG00000005552	gnl3	100	64.695	ENSAPOG00000004048	gnl3	100	65.233	Acanthochromis_polyacanthus
ENSTRUG00000005552	gnl3	99	42.782	ENSAMEG00000008456	GNL3	99	42.782	Ailuropoda_melanoleuca
ENSTRUG00000005552	gnl3	100	61.372	ENSACIG00000000545	gnl3	100	61.011	Amphilophus_citrinellus
ENSTRUG00000005552	gnl3	100	65.412	ENSAOCG00000012879	gnl3	100	65.412	Amphiprion_ocellaris
ENSTRUG00000005552	gnl3	100	64.516	ENSAPEG00000006146	gnl3	100	65.054	Amphiprion_percula
ENSTRUG00000005552	gnl3	100	64.021	ENSATEG00000024242	gnl3	100	64.184	Anabas_testudineus
ENSTRUG00000005552	gnl3	98	41.068	ENSAPLG00000005171	GNL3	99	40.884	Anas_platyrhynchos
ENSTRUG00000005552	gnl3	99	44.444	ENSACAG00000007357	GNL3	99	45.357	Anolis_carolinensis
ENSTRUG00000005552	gnl3	99	44.345	ENSANAG00000033209	GNL3	99	44.224	Aotus_nancymaae
ENSTRUG00000005552	gnl3	100	61.913	ENSACLG00000007381	gnl3	100	62.050	Astatotilapia_calliptera
ENSTRUG00000005552	gnl3	99	49.735	ENSAMXG00000020880	gnl3	99	50.973	Astyanax_mexicanus
ENSTRUG00000005552	gnl3	99	42.857	ENSBTAG00000014549	GNL3	99	44.444	Bos_taurus
ENSTRUG00000005552	gnl3	99	45.027	ENSCJAG00000006864	-	99	45.027	Callithrix_jacchus
ENSTRUG00000005552	gnl3	99	45.027	ENSCJAG00000044256	-	99	45.027	Callithrix_jacchus
ENSTRUG00000005552	gnl3	89	46.154	ENSCAFG00000009004	GNL3	99	42.782	Canis_familiaris
ENSTRUG00000005552	gnl3	89	46.356	ENSCAFG00020002613	GNL3	91	46.356	Canis_lupus_dingo
ENSTRUG00000005552	gnl3	99	42.857	ENSCHIG00000022181	GNL3	99	43.915	Capra_hircus
ENSTRUG00000005552	gnl3	99	44.251	ENSTSYG00000006851	GNL3	99	44.170	Carlito_syrichta
ENSTRUG00000005552	gnl3	99	40.853	ENSCPOG00000000282	GNL3	90	44.286	Cavia_porcellus
ENSTRUG00000005552	gnl3	99	44.424	ENSCCAG00000033281	GNL3	99	44.485	Cebus_capucinus
ENSTRUG00000005552	gnl3	99	43.950	ENSCATG00000040886	GNL3	99	43.929	Cercocebus_atys
ENSTRUG00000005552	gnl3	99	41.652	ENSCLAG00000010109	-	99	41.472	Chinchilla_lanigera
ENSTRUG00000005552	gnl3	99	43.772	ENSCSAG00000013315	GNL3	99	42.756	Chlorocebus_sabaeus
ENSTRUG00000005552	gnl3	99	41.404	ENSCHOG00000002726	GNL3	99	41.638	Choloepus_hoffmanni
ENSTRUG00000005552	gnl3	78	42.921	ENSCPBG00000018330	-	96	43.964	Chrysemys_picta_bellii
ENSTRUG00000005552	gnl3	99	42.909	ENSCANG00000039969	GNL3	99	42.883	Colobus_angolensis_palliatus
ENSTRUG00000005552	gnl3	99	43.345	ENSCGRG00001020950	Gnl3	99	43.604	Cricetulus_griseus_chok1gshd
ENSTRUG00000005552	gnl3	99	43.345	ENSCGRG00000015225	Gnl3	99	43.604	Cricetulus_griseus_crigri
ENSTRUG00000005552	gnl3	99	58.590	ENSCSEG00000005009	gnl3	100	58.590	Cynoglossus_semilaevis
ENSTRUG00000005552	gnl3	100	63.899	ENSCVAG00000010679	gnl3	100	63.538	Cyprinodon_variegatus
ENSTRUG00000005552	gnl3	99	52.313	ENSDARG00000006219	gnl3	99	52.135	Danio_rerio
ENSTRUG00000005552	gnl3	99	43.058	ENSDNOG00000001037	GNL3	99	43.262	Dasypus_novemcinctus
ENSTRUG00000005552	gnl3	99	43.818	ENSDORG00000000674	Gnl3	99	43.636	Dipodomys_ordii
ENSTRUG00000005552	gnl3	99	38.393	ENSETEG00000016534	-	99	38.230	Echinops_telfairi
ENSTRUG00000005552	gnl3	99	43.210	ENSEASG00005014636	GNL3	99	42.857	Equus_asinus_asinus
ENSTRUG00000005552	gnl3	99	43.034	ENSECAG00000014850	GNL3	99	42.681	Equus_caballus
ENSTRUG00000005552	gnl3	99	42.908	ENSEEUG00000004427	GNL3	99	43.088	Erinaceus_europaeus
ENSTRUG00000005552	gnl3	100	56.328	ENSELUG00000008767	gnl3	100	56.328	Esox_lucius
ENSTRUG00000005552	gnl3	99	43.563	ENSFCAG00000015719	GNL3	99	43.386	Felis_catus
ENSTRUG00000005552	gnl3	99	43.907	ENSFALG00000008957	GNL3	99	43.907	Ficedula_albicollis
ENSTRUG00000005552	gnl3	99	43.393	ENSFDAG00000020679	GNL3	99	43.297	Fukomys_damarensis
ENSTRUG00000005552	gnl3	100	64.144	ENSFHEG00000020897	gnl3	100	65.225	Fundulus_heteroclitus
ENSTRUG00000005552	gnl3	100	52.952	ENSGMOG00000001745	gnl3	100	53.534	Gadus_morhua
ENSTRUG00000005552	gnl3	99	41.739	ENSGALG00000001613	GNL3	99	41.319	Gallus_gallus
ENSTRUG00000005552	gnl3	100	54.244	ENSGAFG00000007184	gnl3	99	54.000	Gambusia_affinis
ENSTRUG00000005552	gnl3	99	61.071	ENSGACG00000000309	gnl3	99	62.366	Gasterosteus_aculeatus
ENSTRUG00000005552	gnl3	79	43.694	ENSGAGG00000021579	-	97	43.694	Gopherus_agassizii
ENSTRUG00000005552	gnl3	99	43.416	ENSGGOG00000011444	GNL3	87	46.436	Gorilla_gorilla
ENSTRUG00000005552	gnl3	100	65.108	ENSHBUG00000001340	gnl3	100	65.288	Haplochromis_burtoni
ENSTRUG00000005552	gnl3	99	41.103	ENSHGLG00000018299	GNL3	99	41.860	Heterocephalus_glaber_female
ENSTRUG00000005552	gnl3	99	58.951	ENSHCOG00000009446	gnl3	99	58.951	Hippocampus_comes
ENSTRUG00000005552	gnl3	87	53.236	ENSIPUG00000023677	gnl3	99	47.550	Ictalurus_punctatus
ENSTRUG00000005552	gnl3	99	42.246	ENSSTOG00000000356	GNL3	99	42.629	Ictidomys_tridecemlineatus
ENSTRUG00000005552	gnl3	99	45.750	ENSJJAG00000021993	Gnl3	100	45.586	Jaculus_jaculus
ENSTRUG00000005552	gnl3	100	61.331	ENSKMAG00000005965	gnl3	100	62.230	Kryptolebias_marmoratus
ENSTRUG00000005552	gnl3	100	63.243	ENSLBEG00000011394	gnl3	100	63.243	Labrus_bergylta
ENSTRUG00000005552	gnl3	86	50.840	ENSLACG00000001259	GNL3	99	45.993	Latimeria_chalumnae
ENSTRUG00000005552	gnl3	99	48.258	ENSLOCG00000010542	gnl3	99	50.260	Lepisosteus_oculatus
ENSTRUG00000005552	gnl3	99	39.432	ENSLAFG00000016056	GNL3	99	40.354	Loxodonta_africana
ENSTRUG00000005552	gnl3	99	42.832	ENSMFAG00000000613	GNL3	99	43.750	Macaca_fascicularis
ENSTRUG00000005552	gnl3	99	41.607	ENSMMUG00000012511	GNL3	99	42.518	Macaca_mulatta
ENSTRUG00000005552	gnl3	99	41.607	ENSMNEG00000041979	GNL3	99	42.518	Macaca_nemestrina
ENSTRUG00000005552	gnl3	99	44.306	ENSMLEG00000027696	GNL3	99	44.286	Mandrillus_leucophaeus
ENSTRUG00000005552	gnl3	100	67.145	ENSMAMG00000008904	gnl3	100	67.325	Mastacembelus_armatus
ENSTRUG00000005552	gnl3	88	59.034	ENSMZEG00005014957	-	96	60.404	Maylandia_zebra
ENSTRUG00000005552	gnl3	100	64.748	ENSMZEG00005014857	gnl3	100	64.928	Maylandia_zebra
ENSTRUG00000005552	gnl3	94	34.862	ENSMGAG00000000848	GNL3	92	35.229	Meleagris_gallopavo
ENSTRUG00000005552	gnl3	99	43.321	ENSMAUG00000020178	Gnl3	99	43.345	Mesocricetus_auratus
ENSTRUG00000005552	gnl3	99	40.422	ENSMICG00000016373	GNL3	99	40.035	Microcebus_murinus
ENSTRUG00000005552	gnl3	99	42.473	ENSMOCG00000018437	Gnl3	99	42.171	Microtus_ochrogaster
ENSTRUG00000005552	gnl3	100	64.007	ENSMMOG00000002815	gnl3	99	64.168	Mola_mola
ENSTRUG00000005552	gnl3	99	45.263	ENSMODG00000011257	GNL3	99	45.617	Monodelphis_domestica
ENSTRUG00000005552	gnl3	98	59.774	ENSMALG00000021043	gnl3	93	67.100	Monopterus_albus
ENSTRUG00000005552	gnl3	99	42.729	MGP_CAROLIEiJ_G0019063	Gnl3	99	43.268	Mus_caroli
ENSTRUG00000005552	gnl3	99	43.447	ENSMUSG00000042354	Gnl3	100	54.717	Mus_musculus
ENSTRUG00000005552	gnl3	99	43.986	MGP_PahariEiJ_G0030080	Gnl3	99	43.986	Mus_pahari
ENSTRUG00000005552	gnl3	99	43.659	MGP_SPRETEiJ_G0019948	Gnl3	99	42.986	Mus_spretus
ENSTRUG00000005552	gnl3	99	43.085	ENSMPUG00000016777	GNL3	99	42.707	Mustela_putorius_furo
ENSTRUG00000005552	gnl3	99	44.014	ENSMLUG00000000728	GNL3	99	43.950	Myotis_lucifugus
ENSTRUG00000005552	gnl3	99	43.091	ENSNGAG00000017202	Gnl3	99	42.935	Nannospalax_galili
ENSTRUG00000005552	gnl3	88	61.474	ENSNBRG00000013161	gnl3	99	61.866	Neolamprologus_brichardi
ENSTRUG00000005552	gnl3	99	43.672	ENSNLEG00000007173	GNL3	99	43.649	Nomascus_leucogenys
ENSTRUG00000005552	gnl3	77	38.702	ENSMEUG00000011502	-	87	39.183	Notamacropus_eugenii
ENSTRUG00000005552	gnl3	80	39.180	ENSOPRG00000009356	GNL3	99	39.229	Ochotona_princeps
ENSTRUG00000005552	gnl3	99	42.602	ENSODEG00000009492	GNL3	99	41.935	Octodon_degus
ENSTRUG00000005552	gnl3	100	65.171	ENSONIG00000019335	gnl3	100	65.530	Oreochromis_niloticus
ENSTRUG00000005552	gnl3	99	45.341	ENSOANG00000013437	GNL3	99	45.520	Ornithorhynchus_anatinus
ENSTRUG00000005552	gnl3	99	42.152	ENSOCUG00000009841	GNL3	99	42.606	Oryctolagus_cuniculus
ENSTRUG00000005552	gnl3	100	62.094	ENSORLG00000016030	gnl3	100	61.191	Oryzias_latipes
ENSTRUG00000005552	gnl3	100	60.394	ENSORLG00020014358	gnl3	100	61.191	Oryzias_latipes_hni
ENSTRUG00000005552	gnl3	100	61.733	ENSORLG00015009489	gnl3	100	61.372	Oryzias_latipes_hsok
ENSTRUG00000005552	gnl3	100	61.552	ENSOMEG00000005462	gnl3	100	61.913	Oryzias_melastigma
ENSTRUG00000005552	gnl3	99	42.004	ENSOGAG00000004101	GNL3	99	42.207	Otolemur_garnettii
ENSTRUG00000005552	gnl3	99	43.357	ENSOARG00000002470	GNL3	99	43.531	Ovis_aries
ENSTRUG00000005552	gnl3	99	43.594	ENSPPAG00000019253	GNL3	99	43.571	Pan_paniscus
ENSTRUG00000005552	gnl3	99	43.186	ENSPPRG00000009550	GNL3	99	43.009	Panthera_pardus
ENSTRUG00000005552	gnl3	99	43.009	ENSPTIG00000009356	GNL3	99	42.832	Panthera_tigris_altaica
ENSTRUG00000005552	gnl3	99	43.594	ENSPTRG00000015009	GNL3	99	43.571	Pan_troglodytes
ENSTRUG00000005552	gnl3	99	41.259	ENSPANG00000016579	GNL3	99	42.500	Papio_anubis
ENSTRUG00000005552	gnl3	100	54.464	ENSPKIG00000024295	gnl3	100	55.338	Paramormyrops_kingsleyae
ENSTRUG00000005552	gnl3	99	45.699	ENSPSIG00000011486	GNL3	99	45.863	Pelodiscus_sinensis
ENSTRUG00000005552	gnl3	100	54.898	ENSPMGG00000008210	gnl3	99	56.000	Periophthalmus_magnuspinnatus
ENSTRUG00000005552	gnl3	99	43.268	ENSPEMG00000017577	Gnl3	99	43.268	Peromyscus_maniculatus_bairdii
ENSTRUG00000005552	gnl3	87	48.240	ENSPCIG00000018642	GNL3	98	44.211	Phascolarctos_cinereus
ENSTRUG00000005552	gnl3	100	61.871	ENSPFOG00000017601	gnl3	100	61.871	Poecilia_formosa
ENSTRUG00000005552	gnl3	100	64.982	ENSPLAG00000016968	gnl3	100	64.982	Poecilia_latipinna
ENSTRUG00000005552	gnl3	100	60.589	ENSPMEG00000018775	gnl3	99	60.364	Poecilia_mexicana
ENSTRUG00000005552	gnl3	100	59.410	ENSPREG00000002909	gnl3	99	59.636	Poecilia_reticulata
ENSTRUG00000005552	gnl3	99	43.286	ENSPPYG00000013800	GNL3	99	42.756	Pongo_abelii
ENSTRUG00000005552	gnl3	82	44.714	ENSPCAG00000002006	GNL3	81	44.714	Procavia_capensis
ENSTRUG00000005552	gnl3	99	42.281	ENSPCOG00000026637	GNL3	99	42.958	Propithecus_coquereli
ENSTRUG00000005552	gnl3	99	42.883	ENSPVAG00000012586	GNL3	99	42.705	Pteropus_vampyrus
ENSTRUG00000005552	gnl3	91	57.977	ENSPNYG00000005130	gnl3	98	58.121	Pundamilia_nyererei
ENSTRUG00000005552	gnl3	99	50.088	ENSPNAG00000013096	gnl3	99	50.265	Pygocentrus_nattereri
ENSTRUG00000005552	gnl3	99	43.416	ENSRNOG00000028461	Gnl3	99	42.959	Rattus_norvegicus
ENSTRUG00000005552	gnl3	99	42.308	ENSRBIG00000031778	GNL3	99	43.214	Rhinopithecus_bieti
ENSTRUG00000005552	gnl3	99	42.308	ENSRROG00000030086	GNL3	99	43.214	Rhinopithecus_roxellana
ENSTRUG00000005552	gnl3	99	44.345	ENSSBOG00000019990	GNL3	99	44.165	Saimiri_boliviensis_boliviensis
ENSTRUG00000005552	gnl3	87	47.412	ENSSHAG00000006141	GNL3	99	43.717	Sarcophilus_harrisii
ENSTRUG00000005552	gnl3	100	52.509	ENSSFOG00015021228	gnl3	100	52.236	Scleropages_formosus
ENSTRUG00000005552	gnl3	100	64.312	ENSSMAG00000006662	gnl3	100	64.312	Scophthalmus_maximus
ENSTRUG00000005552	gnl3	100	66.906	ENSSDUG00000000972	gnl3	100	66.906	Seriola_dumerili
ENSTRUG00000005552	gnl3	100	67.446	ENSSLDG00000008692	gnl3	92	67.446	Seriola_lalandi_dorsalis
ENSTRUG00000005552	gnl3	88	42.857	ENSSARG00000002226	GNL3	87	44.099	Sorex_araneus
ENSTRUG00000005552	gnl3	99	45.026	ENSSPUG00000003582	GNL3	99	45.884	Sphenodon_punctatus
ENSTRUG00000005552	gnl3	100	65.889	ENSSPAG00000020180	gnl3	100	65.889	Stegastes_partitus
ENSTRUG00000005552	gnl3	99	41.093	ENSSSCG00000011449	GNL3	99	41.416	Sus_scrofa
ENSTRUG00000005552	gnl3	86	45.610	ENSTGUG00000005774	GNL3	99	42.451	Taeniopygia_guttata
ENSTRUG00000005552	gnl3	100	79.129	ENSTNIG00000007263	gnl3	100	79.492	Tetraodon_nigroviridis
ENSTRUG00000005552	gnl3	99	40.325	ENSTBEG00000017518	GNL3	99	40.942	Tupaia_belangeri
ENSTRUG00000005552	gnl3	99	43.011	ENSUAMG00000012347	GNL3	99	42.883	Ursus_americanus
ENSTRUG00000005552	gnl3	99	42.958	ENSUMAG00000021001	GNL3	87	46.356	Ursus_maritimus
ENSTRUG00000005552	gnl3	99	42.321	ENSVVUG00000024536	-	100	53.521	Vulpes_vulpes
ENSTRUG00000005552	gnl3	100	49.907	ENSXCOG00000018425	gnl3	98	64.440	Xiphophorus_couchianus
ENSTRUG00000005552	gnl3	100	64.260	ENSXMAG00000022565	gnl3	100	64.260	Xiphophorus_maculatus