EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSTRUG00000005577 (Gene tree)
Gene ID: 101073511
Gene Symbol: sf3b5
Alias: Splicing factor 3B subunit 10|si:ch211-8a9.5|zgc:92874
Full Name: splicing factor 3b subunit 5
Gene Type: protein_coding
Species: Takifugu_rubripes
Status: putative
Strand: Plus strand
Length: 261 bases
Position: chr4:4152643-4152903
Accession: 101073511
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTRUP00000013437	SF3b10	PF07189.11	7.5e-40	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTRUT00000013499	-	261	XM_003963781	ENSTRUP00000013437	86 (aa)	XP_003963830	H2SM01

Gene Model

Click here to download ENSTRUG00000005577's gene model file

Pathways

Pathway ID	Pathway Name	Source
tru03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSTRUG00000005577's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTRUG00000005577	sf3b5	100	90.698	ENSG00000169976	SF3B5	100	90.698	Homo_sapiens
ENSTRUG00000005577	sf3b5	100	96.512	ENSAPOG00000001721	sf3b5	100	96.512	Acanthochromis_polyacanthus
ENSTRUG00000005577	sf3b5	100	96.512	ENSACIG00000008106	sf3b5	100	96.512	Amphilophus_citrinellus
ENSTRUG00000005577	sf3b5	100	96.512	ENSAOCG00000023367	sf3b5	100	96.512	Amphiprion_ocellaris
ENSTRUG00000005577	sf3b5	100	96.512	ENSAPEG00000004605	sf3b5	100	96.512	Amphiprion_percula
ENSTRUG00000005577	sf3b5	100	97.674	ENSATEG00000009720	sf3b5	100	97.674	Anabas_testudineus
ENSTRUG00000005577	sf3b5	100	91.860	ENSACAG00000007948	SF3B5	100	91.860	Anolis_carolinensis
ENSTRUG00000005577	sf3b5	100	90.698	ENSANAG00000019999	SF3B5	100	90.698	Aotus_nancymaae
ENSTRUG00000005577	sf3b5	100	96.512	ENSACLG00000022410	sf3b5	100	96.512	Astatotilapia_calliptera
ENSTRUG00000005577	sf3b5	100	90.698	ENSBTAG00000009795	SF3B5	100	90.698	Bos_taurus
ENSTRUG00000005577	sf3b5	100	90.698	ENSCJAG00000046566	SF3B5	100	90.698	Callithrix_jacchus
ENSTRUG00000005577	sf3b5	100	90.698	ENSCAFG00000032495	SF3B5	100	90.698	Canis_familiaris
ENSTRUG00000005577	sf3b5	100	90.698	ENSCAFG00020000873	SF3B5	100	90.698	Canis_lupus_dingo
ENSTRUG00000005577	sf3b5	100	90.698	ENSCHIG00000007987	SF3B5	100	90.698	Capra_hircus
ENSTRUG00000005577	sf3b5	100	90.698	ENSTSYG00000012236	SF3B5	100	90.698	Carlito_syrichta
ENSTRUG00000005577	sf3b5	100	90.698	ENSCPOG00000012435	SF3B5	100	90.698	Cavia_porcellus
ENSTRUG00000005577	sf3b5	100	90.698	ENSCCAG00000006528	SF3B5	100	90.698	Cebus_capucinus
ENSTRUG00000005577	sf3b5	100	90.698	ENSCATG00000010192	SF3B5	100	90.698	Cercocebus_atys
ENSTRUG00000005577	sf3b5	100	90.698	ENSCLAG00000017802	SF3B5	100	90.698	Chinchilla_lanigera
ENSTRUG00000005577	sf3b5	100	90.698	ENSCSAG00000000187	SF3B5	100	90.698	Chlorocebus_sabaeus
ENSTRUG00000005577	sf3b5	100	91.860	ENSCPBG00000017148	SF3B5	100	91.860	Chrysemys_picta_bellii
ENSTRUG00000005577	sf3b5	98	72.619	ENSCING00000021953	-	98	72.619	Ciona_intestinalis
ENSTRUG00000005577	sf3b5	100	90.698	ENSCANG00000002639	SF3B5	100	90.698	Colobus_angolensis_palliatus
ENSTRUG00000005577	sf3b5	100	89.535	ENSCGRG00001007249	Sf3b5	100	89.535	Cricetulus_griseus_chok1gshd
ENSTRUG00000005577	sf3b5	100	89.535	ENSCGRG00000019185	Sf3b5	100	89.535	Cricetulus_griseus_crigri
ENSTRUG00000005577	sf3b5	100	98.837	ENSCSEG00000003216	sf3b5	100	98.837	Cynoglossus_semilaevis
ENSTRUG00000005577	sf3b5	100	97.674	ENSCVAG00000005040	sf3b5	100	97.674	Cyprinodon_variegatus
ENSTRUG00000005577	sf3b5	100	93.023	ENSDARG00000016855	sf3b5	100	93.023	Danio_rerio
ENSTRUG00000005577	sf3b5	100	90.698	ENSDNOG00000048829	SF3B5	82	90.698	Dasypus_novemcinctus
ENSTRUG00000005577	sf3b5	100	90.698	ENSDORG00000005838	Sf3b5	100	90.698	Dipodomys_ordii
ENSTRUG00000005577	sf3b5	99	81.176	FBgn0040534	Sf3b5	100	81.176	Drosophila_melanogaster
ENSTRUG00000005577	sf3b5	100	90.698	ENSETEG00000004047	SF3B5	100	90.698	Echinops_telfairi
ENSTRUG00000005577	sf3b5	99	82.353	ENSEBUG00000002311	sf3b5	100	82.353	Eptatretus_burgeri
ENSTRUG00000005577	sf3b5	100	90.698	ENSEASG00005009522	SF3B5	100	90.698	Equus_asinus_asinus
ENSTRUG00000005577	sf3b5	100	90.698	ENSECAG00000005457	SF3B5	100	90.698	Equus_caballus
ENSTRUG00000005577	sf3b5	100	97.674	ENSELUG00000014290	SF3B5	100	97.674	Esox_lucius
ENSTRUG00000005577	sf3b5	100	90.698	ENSFCAG00000000936	SF3B5	100	90.698	Felis_catus
ENSTRUG00000005577	sf3b5	100	90.698	ENSFALG00000015012	SF3B5	100	90.698	Ficedula_albicollis
ENSTRUG00000005577	sf3b5	100	90.698	ENSFDAG00000003664	SF3B5	100	90.698	Fukomys_damarensis
ENSTRUG00000005577	sf3b5	100	97.674	ENSFHEG00000020301	sf3b5	100	97.674	Fundulus_heteroclitus
ENSTRUG00000005577	sf3b5	100	96.512	ENSGMOG00000019972	sf3b5	100	96.512	Gadus_morhua
ENSTRUG00000005577	sf3b5	100	93.023	ENSGALG00000030824	SF3B5	100	93.023	Gallus_gallus
ENSTRUG00000005577	sf3b5	100	97.674	ENSGAFG00000000271	sf3b5	100	97.674	Gambusia_affinis
ENSTRUG00000005577	sf3b5	100	97.674	ENSGACG00000010363	sf3b5	100	97.674	Gasterosteus_aculeatus
ENSTRUG00000005577	sf3b5	100	91.860	ENSGAGG00000011434	SF3B5	100	91.860	Gopherus_agassizii
ENSTRUG00000005577	sf3b5	100	87.209	ENSGAGG00000000646	-	100	87.209	Gopherus_agassizii
ENSTRUG00000005577	sf3b5	100	90.698	ENSGGOG00000001537	SF3B5	100	90.698	Gorilla_gorilla
ENSTRUG00000005577	sf3b5	100	96.512	ENSHBUG00000008925	sf3b5	100	96.512	Haplochromis_burtoni
ENSTRUG00000005577	sf3b5	100	90.698	ENSHGLG00000021406	SF3B5	100	90.698	Heterocephalus_glaber_female
ENSTRUG00000005577	sf3b5	100	90.698	ENSHGLG00100020370	SF3B5	100	90.698	Heterocephalus_glaber_male
ENSTRUG00000005577	sf3b5	100	96.512	ENSHCOG00000016806	sf3b5	100	96.512	Hippocampus_comes
ENSTRUG00000005577	sf3b5	100	96.512	ENSHCOG00000016802	sf3b5	100	96.512	Hippocampus_comes
ENSTRUG00000005577	sf3b5	100	96.512	ENSHCOG00000009115	-	100	96.512	Hippocampus_comes
ENSTRUG00000005577	sf3b5	100	95.349	ENSIPUG00000015166	sf3b5	100	95.349	Ictalurus_punctatus
ENSTRUG00000005577	sf3b5	100	90.698	ENSSTOG00000003347	SF3B5	100	90.698	Ictidomys_tridecemlineatus
ENSTRUG00000005577	sf3b5	100	90.698	ENSJJAG00000001857	Sf3b5	100	90.698	Jaculus_jaculus
ENSTRUG00000005577	sf3b5	100	97.674	ENSKMAG00000002249	sf3b5	100	97.674	Kryptolebias_marmoratus
ENSTRUG00000005577	sf3b5	100	97.674	ENSLBEG00000019847	sf3b5	100	97.674	Labrus_bergylta
ENSTRUG00000005577	sf3b5	100	93.023	ENSLACG00000000946	SF3B5	100	93.023	Latimeria_chalumnae
ENSTRUG00000005577	sf3b5	100	96.512	ENSLOCG00000017352	sf3b5	100	96.512	Lepisosteus_oculatus
ENSTRUG00000005577	sf3b5	100	90.698	ENSLAFG00000032489	SF3B5	100	90.698	Loxodonta_africana
ENSTRUG00000005577	sf3b5	100	90.698	ENSMFAG00000029753	SF3B5	100	90.698	Macaca_fascicularis
ENSTRUG00000005577	sf3b5	100	90.698	ENSMMUG00000047691	SF3B5	100	90.698	Macaca_mulatta
ENSTRUG00000005577	sf3b5	100	90.698	ENSMNEG00000028236	SF3B5	100	90.698	Macaca_nemestrina
ENSTRUG00000005577	sf3b5	100	90.698	ENSMLEG00000007622	SF3B5	100	90.698	Mandrillus_leucophaeus
ENSTRUG00000005577	sf3b5	100	96.512	ENSMAMG00000021639	sf3b5	100	96.512	Mastacembelus_armatus
ENSTRUG00000005577	sf3b5	100	96.512	ENSMZEG00005027408	sf3b5	100	96.512	Maylandia_zebra
ENSTRUG00000005577	sf3b5	100	84.884	ENSMZEG00005027407	sf3b5	100	84.884	Maylandia_zebra
ENSTRUG00000005577	sf3b5	100	96.512	ENSMZEG00005028115	SF3B5	100	96.512	Maylandia_zebra
ENSTRUG00000005577	sf3b5	100	93.023	ENSMGAG00000015849	SF3B5	100	93.023	Meleagris_gallopavo
ENSTRUG00000005577	sf3b5	100	89.535	ENSMAUG00000008283	Sf3b5	100	89.535	Mesocricetus_auratus
ENSTRUG00000005577	sf3b5	100	90.698	ENSMICG00000014922	SF3B5	100	90.698	Microcebus_murinus
ENSTRUG00000005577	sf3b5	100	89.535	ENSMOCG00000001713	Sf3b5	100	89.535	Microtus_ochrogaster
ENSTRUG00000005577	sf3b5	100	96.512	ENSMMOG00000007956	sf3b5	100	96.512	Mola_mola
ENSTRUG00000005577	sf3b5	100	90.698	ENSMODG00000023291	SF3B5	83	90.698	Monodelphis_domestica
ENSTRUG00000005577	sf3b5	91	96.296	ENSMALG00000020357	sf3b5	99	96.296	Monopterus_albus
ENSTRUG00000005577	sf3b5	100	89.535	MGP_CAROLIEiJ_G0015120	Sf3b5	100	89.535	Mus_caroli
ENSTRUG00000005577	sf3b5	100	89.535	ENSMUSG00000078348	Sf3b5	100	89.535	Mus_musculus
ENSTRUG00000005577	sf3b5	100	89.535	MGP_PahariEiJ_G0023739	Sf3b5	100	89.535	Mus_pahari
ENSTRUG00000005577	sf3b5	100	89.535	MGP_SPRETEiJ_G0015928	Sf3b5	100	89.535	Mus_spretus
ENSTRUG00000005577	sf3b5	100	90.698	ENSMPUG00000018379	SF3B5	100	90.698	Mustela_putorius_furo
ENSTRUG00000005577	sf3b5	92	94.937	ENSMLUG00000025546	-	92	94.937	Myotis_lucifugus
ENSTRUG00000005577	sf3b5	100	90.698	ENSMLUG00000028504	-	100	90.698	Myotis_lucifugus
ENSTRUG00000005577	sf3b5	100	88.372	ENSMLUG00000010802	-	100	88.372	Myotis_lucifugus
ENSTRUG00000005577	sf3b5	100	90.698	ENSNGAG00000010732	Sf3b5	100	90.698	Nannospalax_galili
ENSTRUG00000005577	sf3b5	100	96.512	ENSNBRG00000014383	sf3b5	100	96.512	Neolamprologus_brichardi
ENSTRUG00000005577	sf3b5	100	90.698	ENSNLEG00000019307	SF3B5	100	90.698	Nomascus_leucogenys
ENSTRUG00000005577	sf3b5	100	90.698	ENSMEUG00000005440	-	100	90.698	Notamacropus_eugenii
ENSTRUG00000005577	sf3b5	100	90.698	ENSMEUG00000005445	-	100	90.698	Notamacropus_eugenii
ENSTRUG00000005577	sf3b5	100	91.860	ENSOPRG00000015107	SF3B5	100	91.860	Ochotona_princeps
ENSTRUG00000005577	sf3b5	100	90.698	ENSODEG00000019507	SF3B5	100	90.698	Octodon_degus
ENSTRUG00000005577	sf3b5	100	96.512	ENSONIG00000020725	sf3b5	100	96.512	Oreochromis_niloticus
ENSTRUG00000005577	sf3b5	69	89.831	ENSOANG00000015301	SF3B5	97	89.831	Ornithorhynchus_anatinus
ENSTRUG00000005577	sf3b5	100	90.698	ENSOCUG00000008752	SF3B5	100	90.698	Oryctolagus_cuniculus
ENSTRUG00000005577	sf3b5	100	95.349	ENSORLG00000004925	sf3b5	100	95.349	Oryzias_latipes
ENSTRUG00000005577	sf3b5	100	95.349	ENSORLG00020011625	sf3b5	100	95.349	Oryzias_latipes_hni
ENSTRUG00000005577	sf3b5	100	95.349	ENSORLG00015017061	sf3b5	100	95.349	Oryzias_latipes_hsok
ENSTRUG00000005577	sf3b5	100	95.349	ENSOMEG00000010620	sf3b5	100	95.349	Oryzias_melastigma
ENSTRUG00000005577	sf3b5	100	90.698	ENSOGAG00000012152	SF3B5	100	90.698	Otolemur_garnettii
ENSTRUG00000005577	sf3b5	92	92.405	ENSOARG00000019486	-	95	92.405	Ovis_aries
ENSTRUG00000005577	sf3b5	100	87.209	ENSOARG00000002617	SF3B5	100	87.209	Ovis_aries
ENSTRUG00000005577	sf3b5	100	90.698	ENSPPAG00000012940	SF3B5	100	90.698	Pan_paniscus
ENSTRUG00000005577	sf3b5	100	90.698	ENSPPRG00000021262	SF3B5	100	90.698	Panthera_pardus
ENSTRUG00000005577	sf3b5	100	90.698	ENSPTIG00000001952	SF3B5	100	90.698	Panthera_tigris_altaica
ENSTRUG00000005577	sf3b5	100	90.698	ENSPTRG00000018676	SF3B5	100	90.698	Pan_troglodytes
ENSTRUG00000005577	sf3b5	100	90.698	ENSPANG00000034242	SF3B5	100	90.698	Papio_anubis
ENSTRUG00000005577	sf3b5	100	94.186	ENSPKIG00000006057	sf3b5	100	94.186	Paramormyrops_kingsleyae
ENSTRUG00000005577	sf3b5	100	91.860	ENSPSIG00000001262	SF3B5	100	91.860	Pelodiscus_sinensis
ENSTRUG00000005577	sf3b5	100	96.512	ENSPMGG00000014804	sf3b5	100	96.512	Periophthalmus_magnuspinnatus
ENSTRUG00000005577	sf3b5	100	89.535	ENSPEMG00000012931	Sf3b5	100	89.535	Peromyscus_maniculatus_bairdii
ENSTRUG00000005577	sf3b5	100	87.209	ENSPMAG00000010296	sf3b5	100	87.209	Petromyzon_marinus
ENSTRUG00000005577	sf3b5	100	69.767	ENSPCIG00000025007	-	100	69.767	Phascolarctos_cinereus
ENSTRUG00000005577	sf3b5	93	93.750	ENSPCIG00000011344	-	78	93.750	Phascolarctos_cinereus
ENSTRUG00000005577	sf3b5	100	97.674	ENSPFOG00000019994	sf3b5	100	97.674	Poecilia_formosa
ENSTRUG00000005577	sf3b5	100	97.674	ENSPLAG00000008412	sf3b5	100	97.674	Poecilia_latipinna
ENSTRUG00000005577	sf3b5	100	97.674	ENSPMEG00000020050	sf3b5	100	97.674	Poecilia_mexicana
ENSTRUG00000005577	sf3b5	100	97.674	ENSPREG00000009242	sf3b5	100	97.674	Poecilia_reticulata
ENSTRUG00000005577	sf3b5	100	90.698	ENSPPYG00000017068	SF3B5	100	90.698	Pongo_abelii
ENSTRUG00000005577	sf3b5	100	90.698	ENSPCAG00000009332	SF3B5	100	90.698	Procavia_capensis
ENSTRUG00000005577	sf3b5	100	90.698	ENSPCOG00000013754	SF3B5	100	90.698	Propithecus_coquereli
ENSTRUG00000005577	sf3b5	56	95.833	ENSPVAG00000002820	SF3B5	100	95.833	Pteropus_vampyrus
ENSTRUG00000005577	sf3b5	100	96.512	ENSPNYG00000002075	sf3b5	100	96.512	Pundamilia_nyererei
ENSTRUG00000005577	sf3b5	100	94.186	ENSPNAG00000004942	sf3b5	100	94.186	Pygocentrus_nattereri
ENSTRUG00000005577	sf3b5	100	89.535	ENSRNOG00000014908	Sf3b5	100	89.535	Rattus_norvegicus
ENSTRUG00000005577	sf3b5	100	90.698	ENSRBIG00000006301	SF3B5	100	90.698	Rhinopithecus_bieti
ENSTRUG00000005577	sf3b5	100	90.698	ENSRROG00000037067	SF3B5	100	90.698	Rhinopithecus_roxellana
ENSTRUG00000005577	sf3b5	100	90.698	ENSSBOG00000006122	SF3B5	100	90.698	Saimiri_boliviensis_boliviensis
ENSTRUG00000005577	sf3b5	100	89.535	ENSSHAG00000015670	SF3B5	100	89.535	Sarcophilus_harrisii
ENSTRUG00000005577	sf3b5	100	93.023	ENSSFOG00015015767	sf3b5	100	93.023	Scleropages_formosus
ENSTRUG00000005577	sf3b5	100	98.837	ENSSMAG00000018852	sf3b5	100	98.837	Scophthalmus_maximus
ENSTRUG00000005577	sf3b5	100	97.674	ENSSDUG00000018161	sf3b5	100	97.674	Seriola_dumerili
ENSTRUG00000005577	sf3b5	100	97.674	ENSSLDG00000014547	sf3b5	100	97.674	Seriola_lalandi_dorsalis
ENSTRUG00000005577	sf3b5	100	90.698	ENSSARG00000007820	SF3B5	100	90.698	Sorex_araneus
ENSTRUG00000005577	sf3b5	100	96.512	ENSSPAG00000009244	sf3b5	100	96.512	Stegastes_partitus
ENSTRUG00000005577	sf3b5	100	96.512	ENSSPAG00000017371	-	100	96.512	Stegastes_partitus
ENSTRUG00000005577	sf3b5	100	90.698	ENSSSCG00000035578	SF3B5	100	90.698	Sus_scrofa
ENSTRUG00000005577	sf3b5	100	93.023	ENSTGUG00000010810	SF3B5	100	93.023	Taeniopygia_guttata
ENSTRUG00000005577	sf3b5	100	100.000	ENSTNIG00000001265	sf3b5	100	100.000	Tetraodon_nigroviridis
ENSTRUG00000005577	sf3b5	100	91.860	ENSTBEG00000003072	SF3B5	100	91.860	Tupaia_belangeri
ENSTRUG00000005577	sf3b5	100	90.698	ENSTTRG00000008817	SF3B5	100	90.698	Tursiops_truncatus
ENSTRUG00000005577	sf3b5	100	90.698	ENSUAMG00000027296	SF3B5	100	90.698	Ursus_americanus
ENSTRUG00000005577	sf3b5	100	90.698	ENSUMAG00000005448	SF3B5	100	90.698	Ursus_maritimus
ENSTRUG00000005577	sf3b5	100	90.698	ENSVPAG00000003826	SF3B5	100	90.698	Vicugna_pacos
ENSTRUG00000005577	sf3b5	100	90.698	ENSVVUG00000004703	SF3B5	100	90.698	Vulpes_vulpes
ENSTRUG00000005577	sf3b5	100	95.349	ENSXETG00000021409	sf3b5	100	95.349	Xenopus_tropicalis
ENSTRUG00000005577	sf3b5	100	97.674	ENSXMAG00000019971	sf3b5	100	97.674	Xiphophorus_maculatus