EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTRUG00000005612 (Gene tree)
Gene ID: 101064751
Gene Symbol: larp1b
Alias: fc76b04|wu:fc76b04
Full Name: La ribonucleoprotein domain family member 1B
Gene Type: protein_coding
Species: Takifugu_rubripes
Status: putative
Strand: Minus strand
Length: 13067 bases
Position: chr2:10865261-10878327
Accession: 101064751
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTRUP00000013540	La	PF05383.17	4.7e-21	1	1
ENSTRUP00000013536	La	PF05383.17	4.8e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTRUT00000013602	-	4781	XM_011620225	ENSTRUP00000013540	999 (aa)	XP_011618527	H2SMA4
ENSTRUT00000013598	-	4931	XM_011620217	ENSTRUP00000013536	1049 (aa)	XP_011618519	H2SMA0

Gene Model

Click here to download ENSTRUG00000005612's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTRUG00000005612's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTRUG00000005612	larp1b	92	53.047	ENSTRUG00000009470	larp1	92	51.302

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTRUG00000005612	larp1b	87	52.809	ENSG00000138709	LARP1B	98	52.511	Homo_sapiens
ENSTRUG00000005612	larp1b	99	77.299	ENSAPOG00000020101	larp1b	99	77.593	Acanthochromis_polyacanthus
ENSTRUG00000005612	larp1b	52	50.351	ENSAMEG00000002748	LARP1B	99	48.404	Ailuropoda_melanoleuca
ENSTRUG00000005612	larp1b	99	72.886	ENSACIG00000023890	larp1b	99	72.860	Amphilophus_citrinellus
ENSTRUG00000005612	larp1b	90	71.861	ENSAOCG00000014268	larp1b	99	71.861	Amphiprion_ocellaris
ENSTRUG00000005612	larp1b	99	75.763	ENSAPEG00000004126	larp1b	99	77.410	Amphiprion_percula
ENSTRUG00000005612	larp1b	99	78.307	ENSATEG00000017849	larp1b	99	78.426	Anabas_testudineus
ENSTRUG00000005612	larp1b	78	59.733	ENSAPLG00000010129	LARP1B	100	53.730	Anas_platyrhynchos
ENSTRUG00000005612	larp1b	84	55.403	ENSACAG00000011338	LARP1B	98	54.225	Anolis_carolinensis
ENSTRUG00000005612	larp1b	61	52.677	ENSANAG00000034618	LARP1B	83	51.948	Aotus_nancymaae
ENSTRUG00000005612	larp1b	99	75.349	ENSACLG00000011948	larp1b	99	73.665	Astatotilapia_calliptera
ENSTRUG00000005612	larp1b	95	57.472	ENSAMXG00000006805	larp1b	88	61.017	Astyanax_mexicanus
ENSTRUG00000005612	larp1b	85	56.484	ENSBTAG00000012135	LARP1B	96	51.141	Bos_taurus
ENSTRUG00000005612	larp1b	82	54.254	ENSCJAG00000003338	LARP1B	99	55.116	Callithrix_jacchus
ENSTRUG00000005612	larp1b	82	58.118	ENSCAFG00000003831	LARP1B	94	63.425	Canis_familiaris
ENSTRUG00000005612	larp1b	82	56.670	ENSCAFG00020018899	LARP1B	96	54.955	Canis_lupus_dingo
ENSTRUG00000005612	larp1b	84	55.026	ENSCHIG00000023144	LARP1B	95	55.298	Capra_hircus
ENSTRUG00000005612	larp1b	83	54.329	ENSCCAG00000021948	LARP1B	99	53.780	Cebus_capucinus
ENSTRUG00000005612	larp1b	82	53.268	ENSCATG00000013541	LARP1B	98	53.217	Cercocebus_atys
ENSTRUG00000005612	larp1b	82	53.746	ENSCSAG00000003582	LARP1B	98	53.922	Chlorocebus_sabaeus
ENSTRUG00000005612	larp1b	82	51.641	ENSCHOG00000005354	LARP1B	79	56.852	Choloepus_hoffmanni
ENSTRUG00000005612	larp1b	88	54.582	ENSCPBG00000017480	LARP1B	90	55.250	Chrysemys_picta_bellii
ENSTRUG00000005612	larp1b	81	54.773	ENSCANG00000026958	LARP1B	98	54.670	Colobus_angolensis_palliatus
ENSTRUG00000005612	larp1b	99	76.650	ENSCSEG00000013519	larp1b	95	75.412	Cynoglossus_semilaevis
ENSTRUG00000005612	larp1b	99	71.006	ENSCVAG00000005046	larp1b	99	72.576	Cyprinodon_variegatus
ENSTRUG00000005612	larp1b	92	63.693	ENSDARG00000061169	larp1b	88	64.620	Danio_rerio
ENSTRUG00000005612	larp1b	73	54.412	ENSETEG00000012497	LARP1B	73	54.412	Echinops_telfairi
ENSTRUG00000005612	larp1b	84	46.694	ENSEBUG00000003668	larp1b	93	46.279	Eptatretus_burgeri
ENSTRUG00000005612	larp1b	85	54.154	ENSEASG00005018106	LARP1B	99	52.637	Equus_asinus_asinus
ENSTRUG00000005612	larp1b	89	53.273	ENSECAG00000001088	LARP1B	84	54.669	Equus_caballus
ENSTRUG00000005612	larp1b	88	51.792	ENSELUG00000023774	larp1b	99	59.079	Esox_lucius
ENSTRUG00000005612	larp1b	84	52.366	ENSFALG00000008098	LARP1B	99	52.013	Ficedula_albicollis
ENSTRUG00000005612	larp1b	99	75.310	ENSFHEG00000010264	larp1b	96	76.153	Fundulus_heteroclitus
ENSTRUG00000005612	larp1b	90	69.062	ENSGMOG00000005207	larp1b	89	69.375	Gadus_morhua
ENSTRUG00000005612	larp1b	86	53.430	ENSGALG00000010207	LARP1B	91	53.597	Gallus_gallus
ENSTRUG00000005612	larp1b	85	80.836	ENSGAFG00000012012	larp1b	95	76.861	Gambusia_affinis
ENSTRUG00000005612	larp1b	99	69.099	ENSGACG00000004609	larp1b	99	69.910	Gasterosteus_aculeatus
ENSTRUG00000005612	larp1b	87	55.763	ENSGAGG00000017209	LARP1B	89	56.237	Gopherus_agassizii
ENSTRUG00000005612	larp1b	82	53.645	ENSGGOG00000015900	LARP1B	98	52.511	Gorilla_gorilla
ENSTRUG00000005612	larp1b	99	75.318	ENSHBUG00000009730	larp1b	99	75.852	Haplochromis_burtoni
ENSTRUG00000005612	larp1b	66	79.795	ENSHCOG00000000918	larp1b	97	79.795	Hippocampus_comes
ENSTRUG00000005612	larp1b	100	59.234	ENSIPUG00000012138	larp1b	88	62.222	Ictalurus_punctatus
ENSTRUG00000005612	larp1b	99	71.737	ENSKMAG00000011589	larp1b	100	72.157	Kryptolebias_marmoratus
ENSTRUG00000005612	larp1b	99	78.426	ENSLBEG00000005655	larp1b	99	78.037	Labrus_bergylta
ENSTRUG00000005612	larp1b	91	56.331	ENSLACG00000015247	LARP1B	90	56.943	Latimeria_chalumnae
ENSTRUG00000005612	larp1b	88	60.636	ENSLOCG00000010684	larp1b	99	56.423	Lepisosteus_oculatus
ENSTRUG00000005612	larp1b	82	54.031	ENSMFAG00000002218	LARP1B	98	54.089	Macaca_fascicularis
ENSTRUG00000005612	larp1b	82	53.704	ENSMMUG00000021347	LARP1B	98	53.762	Macaca_mulatta
ENSTRUG00000005612	larp1b	81	52.088	ENSMNEG00000030406	LARP1B	82	59.855	Macaca_nemestrina
ENSTRUG00000005612	larp1b	81	53.993	ENSMLEG00000009306	LARP1B	98	54.167	Mandrillus_leucophaeus
ENSTRUG00000005612	larp1b	100	75.808	ENSMAMG00000000081	larp1b	100	75.906	Mastacembelus_armatus
ENSTRUG00000005612	larp1b	72	77.823	ENSMZEG00005002545	larp1b	95	79.048	Maylandia_zebra
ENSTRUG00000005612	larp1b	81	50.972	ENSMGAG00000004809	LARP1B	99	50.218	Meleagris_gallopavo
ENSTRUG00000005612	larp1b	82	56.278	ENSMICG00000036111	LARP1B	97	55.359	Microcebus_murinus
ENSTRUG00000005612	larp1b	88	53.922	ENSMODG00000012300	LARP1B	89	53.089	Monodelphis_domestica
ENSTRUG00000005612	larp1b	99	76.719	ENSMALG00000003638	larp1b	99	75.442	Monopterus_albus
ENSTRUG00000005612	larp1b	84	56.479	ENSMPUG00000017365	LARP1B	86	54.611	Mustela_putorius_furo
ENSTRUG00000005612	larp1b	76	60.918	ENSMLUG00000010229	LARP1B	99	52.979	Myotis_lucifugus
ENSTRUG00000005612	larp1b	99	66.667	ENSNBRG00000023846	larp1b	95	73.836	Neolamprologus_brichardi
ENSTRUG00000005612	larp1b	82	54.208	ENSNLEG00000013819	LARP1B	98	53.653	Nomascus_leucogenys
ENSTRUG00000005612	larp1b	64	58.211	ENSMEUG00000010308	LARP1B	75	58.211	Notamacropus_eugenii
ENSTRUG00000005612	larp1b	73	52.918	ENSOPRG00000005478	LARP1B	89	51.217	Ochotona_princeps
ENSTRUG00000005612	larp1b	87	73.415	ENSONIG00000012386	larp1b	100	74.795	Oreochromis_niloticus
ENSTRUG00000005612	larp1b	84	54.130	ENSOCUG00000013330	LARP1B	97	52.609	Oryctolagus_cuniculus
ENSTRUG00000005612	larp1b	97	74.245	ENSORLG00000017954	larp1b	99	73.294	Oryzias_latipes
ENSTRUG00000005612	larp1b	99	72.753	ENSORLG00020013081	larp1b	99	72.458	Oryzias_latipes_hni
ENSTRUG00000005612	larp1b	99	73.419	ENSORLG00015009580	larp1b	99	73.099	Oryzias_latipes_hsok
ENSTRUG00000005612	larp1b	97	75.302	ENSOMEG00000004210	larp1b	99	74.561	Oryzias_melastigma
ENSTRUG00000005612	larp1b	82	56.968	ENSOGAG00000005771	LARP1B	100	55.022	Otolemur_garnettii
ENSTRUG00000005612	larp1b	81	56.748	ENSOARG00000015300	LARP1B	97	54.895	Ovis_aries
ENSTRUG00000005612	larp1b	82	53.930	ENSPPAG00000030439	LARP1B	98	52.293	Pan_paniscus
ENSTRUG00000005612	larp1b	82	54.148	ENSPTRG00000016437	LARP1B	98	52.511	Pan_troglodytes
ENSTRUG00000005612	larp1b	82	54.031	ENSPANG00000012488	LARP1B	98	54.089	Papio_anubis
ENSTRUG00000005612	larp1b	88	53.088	ENSPKIG00000014360	larp1b	98	53.712	Paramormyrops_kingsleyae
ENSTRUG00000005612	larp1b	86	55.463	ENSPSIG00000012885	LARP1B	99	55.381	Pelodiscus_sinensis
ENSTRUG00000005612	larp1b	76	72.855	ENSPMGG00000007207	larp1b	90	73.670	Periophthalmus_magnuspinnatus
ENSTRUG00000005612	larp1b	60	53.372	ENSPMAG00000002700	larp1b	96	48.649	Petromyzon_marinus
ENSTRUG00000005612	larp1b	84	55.757	ENSPCIG00000026516	LARP1B	95	62.140	Phascolarctos_cinereus
ENSTRUG00000005612	larp1b	99	71.429	ENSPFOG00000019519	larp1b	99	72.760	Poecilia_formosa
ENSTRUG00000005612	larp1b	63	68.659	ENSPFOG00000022837	-	99	71.137	Poecilia_formosa
ENSTRUG00000005612	larp1b	99	72.913	ENSPLAG00000007115	larp1b	99	74.490	Poecilia_latipinna
ENSTRUG00000005612	larp1b	99	73.386	ENSPMEG00000001224	larp1b	99	75.147	Poecilia_mexicana
ENSTRUG00000005612	larp1b	83	53.556	ENSPCAG00000007546	LARP1B	99	51.940	Procavia_capensis
ENSTRUG00000005612	larp1b	72	67.742	ENSPCOG00000021874	LARP1B	97	67.742	Propithecus_coquereli
ENSTRUG00000005612	larp1b	83	52.649	ENSPVAG00000005373	LARP1B	97	52.159	Pteropus_vampyrus
ENSTRUG00000005612	larp1b	72	77.364	ENSPNYG00000017357	larp1b	95	77.763	Pundamilia_nyererei
ENSTRUG00000005612	larp1b	93	60.622	ENSPNAG00000008823	larp1b	92	59.482	Pygocentrus_nattereri
ENSTRUG00000005612	larp1b	82	54.536	ENSRROG00000030771	LARP1B	98	54.089	Rhinopithecus_roxellana
ENSTRUG00000005612	larp1b	61	50.000	ENSSHAG00000014474	LARP1B	99	50.218	Sarcophilus_harrisii
ENSTRUG00000005612	larp1b	84	78.022	ENSSMAG00000006347	larp1b	97	78.115	Scophthalmus_maximus
ENSTRUG00000005612	larp1b	96	80.447	ENSSDUG00000004182	larp1b	99	78.578	Seriola_dumerili
ENSTRUG00000005612	larp1b	98	74.093	ENSSLDG00000014613	larp1b	99	78.481	Seriola_lalandi_dorsalis
ENSTRUG00000005612	larp1b	81	54.864	ENSSPUG00000011837	LARP1B	98	54.545	Sphenodon_punctatus
ENSTRUG00000005612	larp1b	96	76.849	ENSSPAG00000017772	larp1b	99	76.606	Stegastes_partitus
ENSTRUG00000005612	larp1b	87	53.505	ENSSSCG00000034280	LARP1B	97	77.907	Sus_scrofa
ENSTRUG00000005612	larp1b	69	60.979	ENSTGUG00000002098	-	84	61.669	Taeniopygia_guttata
ENSTRUG00000005612	larp1b	90	84.632	ENSTNIG00000012398	larp1b	100	84.742	Tetraodon_nigroviridis
ENSTRUG00000005612	larp1b	62	50.825	ENSTBEG00000004177	LARP1B	67	59.420	Tupaia_belangeri
ENSTRUG00000005612	larp1b	72	57.403	ENSTTRG00000012984	LARP1B	88	55.080	Tursiops_truncatus
ENSTRUG00000005612	larp1b	82	56.436	ENSUMAG00000007373	LARP1B	96	54.928	Ursus_maritimus
ENSTRUG00000005612	larp1b	83	47.135	ENSVPAG00000007223	LARP1B	78	54.659	Vicugna_pacos
ENSTRUG00000005612	larp1b	82	56.670	ENSVVUG00000011307	LARP1B	99	54.325	Vulpes_vulpes
ENSTRUG00000005612	larp1b	92	50.201	ENSXETG00000022512	larp1b	96	49.344	Xenopus_tropicalis
ENSTRUG00000005612	larp1b	75	77.969	ENSXCOG00000004435	larp1b	87	73.983	Xiphophorus_couchianus
ENSTRUG00000005612	larp1b	96	78.408	ENSXMAG00000008150	larp1b	99	73.646	Xiphophorus_maculatus