EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTRUG00000005705 (Gene tree)
Gene ID: -
Gene Symbol: zgc:171482
Alias: -
Full Name: zgc:171482
Gene Type: protein_coding
Species: Takifugu_rubripes
Status: putative
Strand: Minus strand
Length: 8081 bases
Position: chr4:10672931-10681011
Accession: ZDB-GENE-080204-84
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTRUP00000013841	zf-met	PF12874.7	1.1e-14	1	2
ENSTRUP00000013841	zf-met	PF12874.7	1.1e-14	2	2
ENSTRUP00000013841	zf-C2H2_jaz	PF12171.8	3.8e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTRUT00000013904	-	507	-	ENSTRUP00000013841	168 (aa)	-	H2SN55

Gene Model

Click here to download ENSTRUG00000005705's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTRUG00000005705's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTRUG00000005705	zgc:171482	79	67.669	ENSTRUG00000005170	zmat4a	57	67.669
ENSTRUG00000005705	zgc:171482	58	47.423	ENSTRUG00000004159	znf346	55	47.423

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTRUG00000005705	zgc:171482	76	92.248	ENSAPOG00000019970	zgc:171482	84	92.248	Acanthochromis_polyacanthus
ENSTRUG00000005705	zgc:171482	68	97.391	ENSACIG00000021512	zgc:171482	86	97.391	Amphilophus_citrinellus
ENSTRUG00000005705	zgc:171482	73	92.742	ENSAOCG00000000751	zgc:171482	91	92.742	Amphiprion_ocellaris
ENSTRUG00000005705	zgc:171482	76	91.473	ENSAPEG00000014154	zgc:171482	93	91.473	Amphiprion_percula
ENSTRUG00000005705	zgc:171482	71	95.652	ENSATEG00000001371	zgc:171482	85	91.667	Anabas_testudineus
ENSTRUG00000005705	zgc:171482	76	90.698	ENSACLG00000010511	zgc:171482	90	90.698	Astatotilapia_calliptera
ENSTRUG00000005705	zgc:171482	73	88.525	ENSAMXG00000002299	zgc:171482	92	88.525	Astyanax_mexicanus
ENSTRUG00000005705	zgc:171482	71	92.500	ENSCSEG00000006509	zgc:171482	78	92.500	Cynoglossus_semilaevis
ENSTRUG00000005705	zgc:171482	71	96.522	ENSCVAG00000013606	zgc:171482	85	96.522	Cyprinodon_variegatus
ENSTRUG00000005705	zgc:171482	80	92.174	ENSDARG00000074415	zgc:171482	86	92.174	Danio_rerio
ENSTRUG00000005705	zgc:171482	67	71.930	ENSELUG00000017517	-	99	58.108	Esox_lucius
ENSTRUG00000005705	zgc:171482	66	96.396	ENSELUG00000021817	zgc:171482	80	96.396	Esox_lucius
ENSTRUG00000005705	zgc:171482	74	92.063	ENSFHEG00000002233	zgc:171482	90	92.063	Fundulus_heteroclitus
ENSTRUG00000005705	zgc:171482	75	94.068	ENSGMOG00000010508	zgc:171482	86	94.068	Gadus_morhua
ENSTRUG00000005705	zgc:171482	68	97.391	ENSGAFG00000009398	zgc:171482	75	97.391	Gambusia_affinis
ENSTRUG00000005705	zgc:171482	71	98.230	ENSGACG00000007680	zgc:171482	85	98.230	Gasterosteus_aculeatus
ENSTRUG00000005705	zgc:171482	76	90.698	ENSHBUG00000023289	zgc:171482	97	90.698	Haplochromis_burtoni
ENSTRUG00000005705	zgc:171482	70	90.756	ENSHCOG00000018086	zgc:171482	89	90.756	Hippocampus_comes
ENSTRUG00000005705	zgc:171482	68	93.913	ENSIPUG00000000361	zgc:171482	83	93.913	Ictalurus_punctatus
ENSTRUG00000005705	zgc:171482	70	93.220	ENSKMAG00000005077	zgc:171482	72	93.220	Kryptolebias_marmoratus
ENSTRUG00000005705	zgc:171482	76	89.147	ENSLBEG00000023823	zgc:171482	92	89.147	Labrus_bergylta
ENSTRUG00000005705	zgc:171482	71	91.304	ENSLOCG00000008863	zgc:171482	82	88.983	Lepisosteus_oculatus
ENSTRUG00000005705	zgc:171482	82	83.333	ENSMAMG00000001031	zgc:171482	81	89.147	Mastacembelus_armatus
ENSTRUG00000005705	zgc:171482	76	83.721	ENSMZEG00005027721	zgc:171482	85	81.343	Maylandia_zebra
ENSTRUG00000005705	zgc:171482	75	92.126	ENSMMOG00000010523	zgc:171482	97	92.126	Mola_mola
ENSTRUG00000005705	zgc:171482	73	92.683	ENSMALG00000017883	zgc:171482	85	92.683	Monopterus_albus
ENSTRUG00000005705	zgc:171482	68	97.368	ENSNBRG00000021035	zgc:171482	85	97.368	Neolamprologus_brichardi
ENSTRUG00000005705	zgc:171482	73	92.742	ENSONIG00000018365	zgc:171482	84	92.742	Oreochromis_niloticus
ENSTRUG00000005705	zgc:171482	71	96.552	ENSORLG00000007607	zgc:171482	85	96.552	Oryzias_latipes
ENSTRUG00000005705	zgc:171482	68	96.522	ENSORLG00020003563	zgc:171482	91	89.147	Oryzias_latipes_hni
ENSTRUG00000005705	zgc:171482	71	96.552	ENSORLG00015008552	zgc:171482	85	96.552	Oryzias_latipes_hsok
ENSTRUG00000005705	zgc:171482	75	92.126	ENSOMEG00000003526	zgc:171482	89	92.126	Oryzias_melastigma
ENSTRUG00000005705	zgc:171482	65	89.091	ENSPKIG00000016244	zgc:171482	83	86.207	Paramormyrops_kingsleyae
ENSTRUG00000005705	zgc:171482	68	93.043	ENSPKIG00000015911	-	80	93.043	Paramormyrops_kingsleyae
ENSTRUG00000005705	zgc:171482	71	97.368	ENSPMGG00000020230	zgc:171482	87	97.368	Periophthalmus_magnuspinnatus
ENSTRUG00000005705	zgc:171482	73	92.742	ENSPFOG00000001974	zgc:171482	83	92.742	Poecilia_formosa
ENSTRUG00000005705	zgc:171482	75	91.339	ENSPLAG00000003327	zgc:171482	84	91.339	Poecilia_latipinna
ENSTRUG00000005705	zgc:171482	75	92.126	ENSPMEG00000004988	zgc:171482	77	92.126	Poecilia_mexicana
ENSTRUG00000005705	zgc:171482	76	89.922	ENSPREG00000019241	zgc:171482	93	89.922	Poecilia_reticulata
ENSTRUG00000005705	zgc:171482	76	90.698	ENSPNYG00000007773	zgc:171482	90	90.698	Pundamilia_nyererei
ENSTRUG00000005705	zgc:171482	68	93.043	ENSPNAG00000007619	zgc:171482	84	88.525	Pygocentrus_nattereri
ENSTRUG00000005705	zgc:171482	77	81.538	ENSSFOG00015016149	zgc:171482	100	81.538	Scleropages_formosus
ENSTRUG00000005705	zgc:171482	68	89.565	ENSSFOG00015021238	zgc:171482	78	89.565	Scleropages_formosus
ENSTRUG00000005705	zgc:171482	75	91.339	ENSSMAG00000002715	zgc:171482	81	91.339	Scophthalmus_maximus
ENSTRUG00000005705	zgc:171482	76	90.625	ENSSDUG00000008773	zgc:171482	90	90.625	Seriola_dumerili
ENSTRUG00000005705	zgc:171482	76	90.625	ENSSLDG00000019510	zgc:171482	90	90.625	Seriola_lalandi_dorsalis
ENSTRUG00000005705	zgc:171482	73	93.548	ENSSPAG00000013724	zgc:171482	98	93.548	Stegastes_partitus
ENSTRUG00000005705	zgc:171482	74	77.419	ENSTNIG00000008679	zgc:171482	85	77.419	Tetraodon_nigroviridis
ENSTRUG00000005705	zgc:171482	85	73.016	ENSXETG00000013525	zmat4	95	73.016	Xenopus_tropicalis
ENSTRUG00000005705	zgc:171482	72	82.927	ENSXMAG00000002641	zgc:171482	75	86.207	Xiphophorus_maculatus