EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSTRUG00000005849 (Gene tree)
Gene ID: 101066897
Gene Symbol: utp20
Alias: im:7159098|wu:fb83c08
Full Name: UTP20%2C small subunit processome component
Gene Type: protein_coding
Species: Takifugu_rubripes
Status: putative
Strand: Plus strand
Length: 15655 bases
Position: chr18:7457328-7472982
Accession: 101066897
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTRUP00000054834	DRIM	PF07539.12	3e-176	1	1
ENSTRUP00000050053	DRIM	PF07539.12	2.5e-175	1	1
ENSTRUP00000048421	DRIM	PF07539.12	3.1e-175	1	1
ENSTRUP00000014257	DRIM	PF07539.12	3.3e-175	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTRUT00000055128	-	8142	-	ENSTRUP00000054834	2713 (aa)	-	-
ENSTRUT00000056742	-	8109	-	ENSTRUP00000048421	2702 (aa)	-	-
ENSTRUT00000049599	-	8157	-	ENSTRUP00000050053	2718 (aa)	-	-
ENSTRUT00000014322	-	8331	XM_011613506	ENSTRUP00000014257	2776 (aa)	XP_011611808	H2SPC0

Gene Model

Click here to download ENSTRUG00000005849's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTRUG00000005849's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTRUG00000005849	utp20	99	56.112	ENSG00000120800	UTP20	99	55.883	Homo_sapiens
ENSTRUG00000005849	utp20	99	79.815	ENSAPOG00000002429	utp20	99	79.558	Acanthochromis_polyacanthus
ENSTRUG00000005849	utp20	99	56.219	ENSAMEG00000016416	UTP20	99	56.031	Ailuropoda_melanoleuca
ENSTRUG00000005849	utp20	99	78.357	ENSACIG00000007987	utp20	99	78.262	Amphilophus_citrinellus
ENSTRUG00000005849	utp20	60	79.821	ENSAOCG00000015055	utp20	96	79.512	Amphiprion_ocellaris
ENSTRUG00000005849	utp20	99	78.872	ENSAPEG00000011605	utp20	99	78.436	Amphiprion_percula
ENSTRUG00000005849	utp20	98	79.015	ENSATEG00000005601	utp20	99	78.876	Anabas_testudineus
ENSTRUG00000005849	utp20	99	57.487	ENSAPLG00000015651	UTP20	100	57.315	Anas_platyrhynchos
ENSTRUG00000005849	utp20	99	56.818	ENSACAG00000011671	UTP20	99	56.341	Anolis_carolinensis
ENSTRUG00000005849	utp20	99	54.891	ENSANAG00000027152	UTP20	99	54.678	Aotus_nancymaae
ENSTRUG00000005849	utp20	95	81.210	ENSACLG00000008064	utp20	99	81.210	Astatotilapia_calliptera
ENSTRUG00000005849	utp20	99	65.390	ENSAMXG00000021039	utp20	99	65.791	Astyanax_mexicanus
ENSTRUG00000005849	utp20	99	57.148	ENSBTAG00000003239	UTP20	99	57.082	Bos_taurus
ENSTRUG00000005849	utp20	99	55.788	ENSCJAG00000001913	UTP20	99	55.575	Callithrix_jacchus
ENSTRUG00000005849	utp20	99	56.060	ENSCAFG00000006964	UTP20	99	55.832	Canis_familiaris
ENSTRUG00000005849	utp20	99	56.024	ENSCAFG00020024305	UTP20	99	55.797	Canis_lupus_dingo
ENSTRUG00000005849	utp20	99	56.975	ENSCHIG00000009221	UTP20	99	56.516	Capra_hircus
ENSTRUG00000005849	utp20	99	55.611	ENSTSYG00000003040	UTP20	99	55.441	Carlito_syrichta
ENSTRUG00000005849	utp20	99	52.899	ENSCAPG00000014920	UTP20	100	52.846	Cavia_aperea
ENSTRUG00000005849	utp20	99	54.591	ENSCPOG00000003129	UTP20	99	54.555	Cavia_porcellus
ENSTRUG00000005849	utp20	99	55.820	ENSCCAG00000031422	UTP20	100	55.295	Cebus_capucinus
ENSTRUG00000005849	utp20	99	54.401	ENSCATG00000035636	UTP20	99	53.890	Cercocebus_atys
ENSTRUG00000005849	utp20	99	55.853	ENSCLAG00000011569	UTP20	99	55.846	Chinchilla_lanigera
ENSTRUG00000005849	utp20	99	56.337	ENSCSAG00000003388	UTP20	99	56.072	Chlorocebus_sabaeus
ENSTRUG00000005849	utp20	91	72.727	ENSCHOG00000003532	UTP20	94	72.727	Choloepus_hoffmanni
ENSTRUG00000005849	utp20	95	57.053	ENSCPBG00000004844	UTP20	99	56.962	Chrysemys_picta_bellii
ENSTRUG00000005849	utp20	94	30.864	ENSCSAVG00000008252	-	97	30.646	Ciona_savignyi
ENSTRUG00000005849	utp20	96	56.289	ENSCANG00000034768	UTP20	99	56.220	Colobus_angolensis_palliatus
ENSTRUG00000005849	utp20	99	55.623	ENSCGRG00001017151	Utp20	99	55.433	Cricetulus_griseus_chok1gshd
ENSTRUG00000005849	utp20	99	55.410	ENSCGRG00000008595	Utp20	99	55.220	Cricetulus_griseus_crigri
ENSTRUG00000005849	utp20	98	74.881	ENSCSEG00000014760	utp20	99	74.844	Cynoglossus_semilaevis
ENSTRUG00000005849	utp20	99	74.236	ENSCVAG00000001727	utp20	99	74.243	Cyprinodon_variegatus
ENSTRUG00000005849	utp20	99	65.515	ENSDARG00000099280	utp20	99	65.693	Danio_rerio
ENSTRUG00000005849	utp20	99	56.051	ENSDNOG00000016845	UTP20	99	55.732	Dasypus_novemcinctus
ENSTRUG00000005849	utp20	97	58.202	ENSDORG00000014762	Utp20	99	58.202	Dipodomys_ordii
ENSTRUG00000005849	utp20	89	75.556	ENSETEG00000019983	UTP20	89	75.556	Echinops_telfairi
ENSTRUG00000005849	utp20	99	56.004	ENSEASG00005019981	UTP20	99	55.827	Equus_asinus_asinus
ENSTRUG00000005849	utp20	99	55.969	ENSECAG00000006876	UTP20	99	55.792	Equus_caballus
ENSTRUG00000005849	utp20	71	62.500	ENSEEUG00000003774	UTP20	75	58.824	Erinaceus_europaeus
ENSTRUG00000005849	utp20	99	70.287	ENSELUG00000000798	utp20	99	70.393	Esox_lucius
ENSTRUG00000005849	utp20	99	56.186	ENSFCAG00000006150	UTP20	99	56.077	Felis_catus
ENSTRUG00000005849	utp20	94	55.760	ENSFALG00000011135	UTP20	100	55.710	Ficedula_albicollis
ENSTRUG00000005849	utp20	93	51.822	ENSFDAG00000007567	UTP20	99	49.868	Fukomys_damarensis
ENSTRUG00000005849	utp20	98	72.309	ENSFHEG00000004142	utp20	99	76.413	Fundulus_heteroclitus
ENSTRUG00000005849	utp20	99	65.753	ENSGMOG00000006762	utp20	99	65.942	Gadus_morhua
ENSTRUG00000005849	utp20	99	57.439	ENSGALG00000011643	UTP20	99	57.148	Gallus_gallus
ENSTRUG00000005849	utp20	95	76.540	ENSGAFG00000006986	utp20	99	74.479	Gambusia_affinis
ENSTRUG00000005849	utp20	99	76.863	ENSGACG00000019092	utp20	99	76.437	Gasterosteus_aculeatus
ENSTRUG00000005849	utp20	68	60.054	ENSGAGG00000011169	UTP20	97	59.152	Gopherus_agassizii
ENSTRUG00000005849	utp20	99	55.702	ENSGGOG00000004904	UTP20	99	55.473	Gorilla_gorilla
ENSTRUG00000005849	utp20	99	77.960	ENSHBUG00000010613	utp20	99	77.917	Haplochromis_burtoni
ENSTRUG00000005849	utp20	99	54.811	ENSHGLG00000006422	UTP20	99	54.821	Heterocephalus_glaber_female
ENSTRUG00000005849	utp20	99	53.443	ENSHGLG00100001086	UTP20	99	53.450	Heterocephalus_glaber_male
ENSTRUG00000005849	utp20	99	71.582	ENSHCOG00000005421	utp20	99	71.787	Hippocampus_comes
ENSTRUG00000005849	utp20	99	65.956	ENSIPUG00000013717	utp20	99	65.814	Ictalurus_punctatus
ENSTRUG00000005849	utp20	99	56.190	ENSSTOG00000015995	UTP20	99	55.966	Ictidomys_tridecemlineatus
ENSTRUG00000005849	utp20	99	54.613	ENSJJAG00000019321	Utp20	99	54.661	Jaculus_jaculus
ENSTRUG00000005849	utp20	98	75.395	ENSKMAG00000005972	utp20	99	73.821	Kryptolebias_marmoratus
ENSTRUG00000005849	utp20	98	78.807	ENSLBEG00000000781	utp20	98	79.944	Labrus_bergylta
ENSTRUG00000005849	utp20	79	59.441	ENSLACG00000010098	UTP20	99	59.126	Latimeria_chalumnae
ENSTRUG00000005849	utp20	93	62.568	ENSLOCG00000015197	utp20	92	75.000	Lepisosteus_oculatus
ENSTRUG00000005849	utp20	99	55.233	ENSLAFG00000012983	UTP20	99	55.214	Loxodonta_africana
ENSTRUG00000005849	utp20	99	56.017	ENSMFAG00000037766	UTP20	99	55.930	Macaca_fascicularis
ENSTRUG00000005849	utp20	99	56.124	ENSMMUG00000012891	UTP20	99	56.037	Macaca_mulatta
ENSTRUG00000005849	utp20	99	54.668	ENSMNEG00000037418	UTP20	98	57.447	Macaca_nemestrina
ENSTRUG00000005849	utp20	99	54.765	ENSMLEG00000029148	UTP20	99	54.500	Mandrillus_leucophaeus
ENSTRUG00000005849	utp20	99	78.495	ENSMAMG00000002063	utp20	99	78.217	Mastacembelus_armatus
ENSTRUG00000005849	utp20	99	77.794	ENSMZEG00005018123	utp20	99	77.501	Maylandia_zebra
ENSTRUG00000005849	utp20	99	56.987	ENSMGAG00000011726	UTP20	99	56.546	Meleagris_gallopavo
ENSTRUG00000005849	utp20	65	54.137	ENSMAUG00000011898	Utp20	99	53.863	Mesocricetus_auratus
ENSTRUG00000005849	utp20	99	53.661	ENSMICG00000015736	UTP20	99	53.655	Microcebus_murinus
ENSTRUG00000005849	utp20	99	54.359	ENSMOCG00000015242	Utp20	99	54.217	Microtus_ochrogaster
ENSTRUG00000005849	utp20	99	74.938	ENSMMOG00000003360	utp20	99	74.546	Mola_mola
ENSTRUG00000005849	utp20	99	55.536	ENSMODG00000003141	UTP20	99	55.261	Monodelphis_domestica
ENSTRUG00000005849	utp20	99	77.439	ENSMALG00000002723	utp20	99	77.877	Monopterus_albus
ENSTRUG00000005849	utp20	99	55.622	MGP_CAROLIEiJ_G0015713	Utp20	99	55.501	Mus_caroli
ENSTRUG00000005849	utp20	99	55.709	ENSMUSG00000004356	Utp20	99	55.567	Mus_musculus
ENSTRUG00000005849	utp20	99	55.504	MGP_PahariEiJ_G0031372	Utp20	99	55.382	Mus_pahari
ENSTRUG00000005849	utp20	99	55.618	MGP_SPRETEiJ_G0016531	Utp20	94	75.610	Mus_spretus
ENSTRUG00000005849	utp20	99	55.965	ENSMPUG00000011641	UTP20	99	55.847	Mustela_putorius_furo
ENSTRUG00000005849	utp20	99	56.358	ENSMLUG00000002313	UTP20	99	56.060	Myotis_lucifugus
ENSTRUG00000005849	utp20	99	55.753	ENSNGAG00000013738	Utp20	99	55.738	Nannospalax_galili
ENSTRUG00000005849	utp20	81	93.750	ENSNBRG00000019464	utp20	99	93.750	Neolamprologus_brichardi
ENSTRUG00000005849	utp20	99	56.230	ENSNLEG00000006166	UTP20	99	55.717	Nomascus_leucogenys
ENSTRUG00000005849	utp20	88	85.185	ENSMEUG00000015457	UTP20	88	85.185	Notamacropus_eugenii
ENSTRUG00000005849	utp20	85	78.981	ENSOPRG00000010546	UTP20	87	78.981	Ochotona_princeps
ENSTRUG00000005849	utp20	99	55.560	ENSODEG00000013411	UTP20	99	55.437	Octodon_degus
ENSTRUG00000005849	utp20	99	79.150	ENSONIG00000009910	utp20	99	79.044	Oreochromis_niloticus
ENSTRUG00000005849	utp20	99	55.968	ENSOANG00000005578	UTP20	100	55.579	Ornithorhynchus_anatinus
ENSTRUG00000005849	utp20	99	56.195	ENSOCUG00000010475	UTP20	99	55.990	Oryctolagus_cuniculus
ENSTRUG00000005849	utp20	95	72.189	ENSORLG00000008900	utp20	99	72.773	Oryzias_latipes
ENSTRUG00000005849	utp20	95	72.215	ENSORLG00020005879	utp20	99	72.524	Oryzias_latipes_hni
ENSTRUG00000005849	utp20	98	70.710	ENSORLG00015002843	utp20	98	72.949	Oryzias_latipes_hsok
ENSTRUG00000005849	utp20	98	72.847	ENSOMEG00000023583	utp20	99	76.101	Oryzias_melastigma
ENSTRUG00000005849	utp20	99	55.500	ENSOGAG00000015130	UTP20	99	55.075	Otolemur_garnettii
ENSTRUG00000005849	utp20	99	56.655	ENSOARG00000014722	UTP20	99	56.588	Ovis_aries
ENSTRUG00000005849	utp20	99	56.077	ENSPPAG00000001381	UTP20	99	55.848	Pan_paniscus
ENSTRUG00000005849	utp20	99	56.044	ENSPPRG00000001026	UTP20	99	56.006	Panthera_pardus
ENSTRUG00000005849	utp20	99	56.075	ENSPTIG00000020972	UTP20	99	55.879	Panthera_tigris_altaica
ENSTRUG00000005849	utp20	99	56.148	ENSPTRG00000005349	UTP20	99	55.919	Pan_troglodytes
ENSTRUG00000005849	utp20	99	56.195	ENSPANG00000020388	UTP20	99	55.966	Papio_anubis
ENSTRUG00000005849	utp20	99	65.502	ENSPKIG00000007196	utp20	99	65.383	Paramormyrops_kingsleyae
ENSTRUG00000005849	utp20	94	56.713	ENSPSIG00000016689	UTP20	100	56.568	Pelodiscus_sinensis
ENSTRUG00000005849	utp20	99	75.261	ENSPMGG00000004066	utp20	99	75.188	Periophthalmus_magnuspinnatus
ENSTRUG00000005849	utp20	99	56.026	ENSPEMG00000024120	Utp20	99	56.014	Peromyscus_maniculatus_bairdii
ENSTRUG00000005849	utp20	99	55.144	ENSPCIG00000009298	UTP20	99	55.290	Phascolarctos_cinereus
ENSTRUG00000005849	utp20	92	75.730	ENSPFOG00000003312	utp20	100	76.143	Poecilia_formosa
ENSTRUG00000005849	utp20	98	73.346	ENSPLAG00000012874	utp20	99	75.630	Poecilia_latipinna
ENSTRUG00000005849	utp20	98	73.012	ENSPMEG00000005915	utp20	99	75.281	Poecilia_mexicana
ENSTRUG00000005849	utp20	98	73.642	ENSPREG00000013285	utp20	99	73.657	Poecilia_reticulata
ENSTRUG00000005849	utp20	89	56.142	ENSPPYG00000004871	UTP20	100	55.963	Pongo_abelii
ENSTRUG00000005849	utp20	82	71.717	ENSPCAG00000012791	UTP20	81	71.717	Procavia_capensis
ENSTRUG00000005849	utp20	96	55.777	ENSPCOG00000024948	UTP20	99	55.260	Propithecus_coquereli
ENSTRUG00000005849	utp20	99	55.059	ENSPVAG00000008113	UTP20	99	54.888	Pteropus_vampyrus
ENSTRUG00000005849	utp20	99	77.459	ENSPNYG00000011561	utp20	99	77.027	Pundamilia_nyererei
ENSTRUG00000005849	utp20	99	65.886	ENSPNAG00000006176	utp20	99	65.793	Pygocentrus_nattereri
ENSTRUG00000005849	utp20	99	55.642	ENSRNOG00000005823	Utp20	99	55.552	Rattus_norvegicus
ENSTRUG00000005849	utp20	99	54.961	ENSRBIG00000025384	UTP20	99	54.526	Rhinopithecus_bieti
ENSTRUG00000005849	utp20	99	56.388	ENSRROG00000041254	UTP20	99	55.982	Rhinopithecus_roxellana
ENSTRUG00000005849	utp20	99	55.864	ENSSBOG00000035762	UTP20	99	55.828	Saimiri_boliviensis_boliviensis
ENSTRUG00000005849	utp20	98	53.775	ENSSHAG00000002298	UTP20	95	60.213	Sarcophilus_harrisii
ENSTRUG00000005849	utp20	99	67.286	ENSSFOG00015001674	utp20	99	67.000	Scleropages_formosus
ENSTRUG00000005849	utp20	98	76.348	ENSSMAG00000016460	utp20	99	76.119	Scophthalmus_maximus
ENSTRUG00000005849	utp20	99	81.131	ENSSDUG00000013730	utp20	99	80.952	Seriola_dumerili
ENSTRUG00000005849	utp20	99	81.583	ENSSLDG00000012844	utp20	99	81.476	Seriola_lalandi_dorsalis
ENSTRUG00000005849	utp20	56	72.897	ENSSARG00000002796	-	55	72.897	Sorex_araneus
ENSTRUG00000005849	utp20	99	55.882	ENSSPUG00000004513	UTP20	99	55.488	Sphenodon_punctatus
ENSTRUG00000005849	utp20	99	78.270	ENSSPAG00000014674	utp20	99	78.283	Stegastes_partitus
ENSTRUG00000005849	utp20	99	56.145	ENSSSCG00000000869	UTP20	99	55.880	Sus_scrofa
ENSTRUG00000005849	utp20	77	56.702	ENSTGUG00000009053	-	99	56.365	Taeniopygia_guttata
ENSTRUG00000005849	utp20	99	84.703	ENSTNIG00000006921	utp20	99	84.632	Tetraodon_nigroviridis
ENSTRUG00000005849	utp20	89	51.743	ENSTBEG00000011917	UTP20	92	51.743	Tupaia_belangeri
ENSTRUG00000005849	utp20	97	56.501	ENSTTRG00000017195	UTP20	98	56.501	Tursiops_truncatus
ENSTRUG00000005849	utp20	99	56.031	ENSUAMG00000016363	UTP20	99	56.004	Ursus_americanus
ENSTRUG00000005849	utp20	99	55.599	ENSUMAG00000000077	UTP20	99	55.544	Ursus_maritimus
ENSTRUG00000005849	utp20	89	56.347	ENSVPAG00000011620	UTP20	92	56.358	Vicugna_pacos
ENSTRUG00000005849	utp20	99	56.026	ENSVVUG00000018110	UTP20	99	56.686	Vulpes_vulpes
ENSTRUG00000005849	utp20	98	55.700	ENSXETG00000032346	UTP20	99	55.850	Xenopus_tropicalis
ENSTRUG00000005849	utp20	95	76.199	ENSXMAG00000006503	utp20	99	73.180	Xiphophorus_maculatus