EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTRUG00000005880 (Gene tree)
Gene ID: 101074709
Gene Symbol: -
Alias: -
Full Name: zinc finger protein 878-like
Gene Type: protein_coding
Species: Takifugu_rubripes
Status: putative
Strand: Minus strand
Length: 4689 bases
Position: chr8:6975479-6980167
Accession: 101074709
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTRUP00000014328	zf-C2H2	PF00096.26	5.8e-45	1	8
ENSTRUP00000014328	zf-C2H2	PF00096.26	5.8e-45	2	8
ENSTRUP00000014328	zf-C2H2	PF00096.26	5.8e-45	3	8
ENSTRUP00000014328	zf-C2H2	PF00096.26	5.8e-45	4	8
ENSTRUP00000014328	zf-C2H2	PF00096.26	5.8e-45	5	8
ENSTRUP00000014328	zf-C2H2	PF00096.26	5.8e-45	6	8
ENSTRUP00000014328	zf-C2H2	PF00096.26	5.8e-45	7	8
ENSTRUP00000014328	zf-C2H2	PF00096.26	5.8e-45	8	8
ENSTRUP00000014328	zf-met	PF12874.7	0.00035	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTRUT00000014394	-	2352	XM_011606318	ENSTRUP00000014328	745 (aa)	XP_011604620	H2SPJ1

Gene Model

Click here to download ENSTRUG00000005880's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTRUG00000005880's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTRUG00000005880	-	62	37.109	ENSTRUG00000020208	-	67	37.984
ENSTRUG00000005880	-	67	37.705	ENSTRUG00000022666	-	97	37.195
ENSTRUG00000005880	-	54	32.824	ENSTRUG00000019558	-	58	32.143
ENSTRUG00000005880	-	54	31.624	ENSTRUG00000020495	si:dkey-89b17.4	59	31.624
ENSTRUG00000005880	-	63	43.005	ENSTRUG00000022919	-	85	43.005
ENSTRUG00000005880	-	53	37.705	ENSTRUG00000021675	-	69	37.705
ENSTRUG00000005880	-	52	46.951	ENSTRUG00000007022	-	78	46.951
ENSTRUG00000005880	-	64	44.681	ENSTRUG00000012273	-	76	44.681
ENSTRUG00000005880	-	99	34.043	ENSTRUG00000025881	-	98	34.211
ENSTRUG00000005880	-	57	31.905	ENSTRUG00000013850	prdm5	79	31.152
ENSTRUG00000005880	-	53	41.718	ENSTRUG00000023491	-	59	41.718
ENSTRUG00000005880	-	54	31.507	ENSTRUG00000019685	znf319b	85	30.484
ENSTRUG00000005880	-	54	41.463	ENSTRUG00000017456	znf236	68	33.884
ENSTRUG00000005880	-	53	36.656	ENSTRUG00000003277	zbtb17	93	44.715
ENSTRUG00000005880	-	52	37.795	ENSTRUG00000022076	-	80	37.795
ENSTRUG00000005880	-	54	45.517	ENSTRUG00000001268	-	91	36.232
ENSTRUG00000005880	-	52	45.570	ENSTRUG00000013906	-	93	42.857
ENSTRUG00000005880	-	60	42.857	ENSTRUG00000000415	gfi1ab	64	42.857
ENSTRUG00000005880	-	56	35.714	ENSTRUG00000011385	znf341	57	35.714
ENSTRUG00000005880	-	56	30.769	ENSTRUG00000006180	si:ch211-216l23.1	87	30.872
ENSTRUG00000005880	-	55	35.354	ENSTRUG00000001452	PRDM15	54	35.354
ENSTRUG00000005880	-	67	33.333	ENSTRUG00000000995	-	80	33.333
ENSTRUG00000005880	-	53	33.208	ENSTRUG00000024073	-	63	33.208
ENSTRUG00000005880	-	61	43.781	ENSTRUG00000023925	-	63	43.781
ENSTRUG00000005880	-	68	35.235	ENSTRUG00000006896	-	90	34.030
ENSTRUG00000005880	-	57	45.205	ENSTRUG00000020582	-	91	45.205
ENSTRUG00000005880	-	54	43.043	ENSTRUG00000022206	-	56	43.719
ENSTRUG00000005880	-	54	32.824	ENSTRUG00000012719	-	56	32.143
ENSTRUG00000005880	-	55	33.977	ENSTRUG00000006950	zbtb16b	55	33.977
ENSTRUG00000005880	-	62	32.450	ENSTRUG00000011637	scrt1b	60	32.558
ENSTRUG00000005880	-	56	46.000	ENSTRUG00000019940	-	57	46.000
ENSTRUG00000005880	-	98	33.441	ENSTRUG00000022066	-	98	33.828
ENSTRUG00000005880	-	56	38.587	ENSTRUG00000015687	-	99	38.650
ENSTRUG00000005880	-	54	32.242	ENSTRUG00000022843	-	68	31.990
ENSTRUG00000005880	-	77	37.072	ENSTRUG00000019483	-	95	38.462
ENSTRUG00000005880	-	62	42.063	ENSTRUG00000021765	-	62	42.063
ENSTRUG00000005880	-	53	34.056	ENSTRUG00000003454	-	71	33.333
ENSTRUG00000005880	-	56	40.936	ENSTRUG00000005321	-	95	37.634

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTRUG00000005880	-	97	64.770	ENSATEG00000009436	-	99	65.604	Anabas_testudineus
ENSTRUG00000005880	-	95	47.173	ENSCVAG00000004222	-	93	47.368	Cyprinodon_variegatus
ENSTRUG00000005880	-	54	39.888	ENSELUG00000009654	-	68	38.776	Esox_lucius
ENSTRUG00000005880	-	95	54.878	ENSHCOG00000002898	-	100	54.116	Hippocampus_comes
ENSTRUG00000005880	-	96	60.615	ENSKMAG00000011850	-	97	61.840	Kryptolebias_marmoratus
ENSTRUG00000005880	-	55	68.090	ENSLBEG00000011986	-	98	68.090	Labrus_bergylta
ENSTRUG00000005880	-	54	75.291	ENSONIG00000008984	-	99	75.291	Oreochromis_niloticus
ENSTRUG00000005880	-	59	38.406	ENSPFOG00000018462	-	78	32.353	Poecilia_formosa
ENSTRUG00000005880	-	54	46.753	ENSSFOG00015008577	-	98	45.312	Scleropages_formosus
ENSTRUG00000005880	-	97	64.714	ENSSMAG00000000056	-	99	65.183	Scophthalmus_maximus
ENSTRUG00000005880	-	52	43.030	ENSXETG00000030249	-	51	43.030	Xenopus_tropicalis