EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSTRUG00000005923 (Gene tree)
Gene ID: 101074896
Gene Symbol: yrdc
Alias: zgc:162301
Full Name: yrdC N6-threonylcarbamoyltransferase domain containing
Gene Type: protein_coding
Species: Takifugu_rubripes
Status: putative
Strand: Plus strand
Length: 7043 bases
Position: chrHE591655.1:119944-126986
Accession: 101074896
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTRUP00000014415	Sua5_yciO_yrdC	PF01300.18	1.2e-49	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTRUT00000014481	-	1719	XM_011618195	ENSTRUP00000014415	270 (aa)	XP_011616497	H2SPS8

Gene Model

Click here to download ENSTRUG00000005923's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTRUG00000005923's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTRUG00000005923	yrdc	91	54.000	ENSG00000196449	YRDC	87	51.200	Homo_sapiens
ENSTRUG00000005923	yrdc	91	74.694	ENSAPOG00000024293	yrdc	92	74.694	Acanthochromis_polyacanthus
ENSTRUG00000005923	yrdc	67	62.366	ENSAMEG00000001173	YRDC	99	58.602	Ailuropoda_melanoleuca
ENSTRUG00000005923	yrdc	99	70.632	ENSACIG00000017330	yrdc	99	70.260	Amphilophus_citrinellus
ENSTRUG00000005923	yrdc	92	74.699	ENSAOCG00000021647	yrdc	93	74.699	Amphiprion_ocellaris
ENSTRUG00000005923	yrdc	92	74.297	ENSAPEG00000006164	yrdc	92	75.102	Amphiprion_percula
ENSTRUG00000005923	yrdc	93	76.494	ENSATEG00000010086	yrdc	92	76.494	Anabas_testudineus
ENSTRUG00000005923	yrdc	70	60.309	ENSACAG00000017203	YRDC	94	58.794	Anolis_carolinensis
ENSTRUG00000005923	yrdc	72	61.111	ENSANAG00000028788	-	84	58.081	Aotus_nancymaae
ENSTRUG00000005923	yrdc	87	49.254	ENSANAG00000031052	-	77	54.717	Aotus_nancymaae
ENSTRUG00000005923	yrdc	94	72.835	ENSACLG00000027775	yrdc	93	72.441	Astatotilapia_calliptera
ENSTRUG00000005923	yrdc	99	61.029	ENSAMXG00000037791	yrdc	99	61.508	Astyanax_mexicanus
ENSTRUG00000005923	yrdc	95	50.746	ENSBTAG00000006510	YRDC	97	48.134	Bos_taurus
ENSTRUG00000005923	yrdc	74	36.000	WBGene00012997	Y48C3A.18	93	35.714	Caenorhabditis_elegans
ENSTRUG00000005923	yrdc	72	61.616	ENSCJAG00000002078	YRDC	55	58.081	Callithrix_jacchus
ENSTRUG00000005923	yrdc	74	59.242	ENSCAFG00000003253	YRDC	73	57.500	Canis_familiaris
ENSTRUG00000005923	yrdc	74	60.190	ENSCAFG00020007843	YRDC	73	58.500	Canis_lupus_dingo
ENSTRUG00000005923	yrdc	87	54.472	ENSCHIG00000007882	YRDC	72	59.000	Capra_hircus
ENSTRUG00000005923	yrdc	63	63.006	ENSTSYG00000005555	YRDC	62	58.960	Carlito_syrichta
ENSTRUG00000005923	yrdc	73	61.500	ENSCPOG00000036144	YRDC	71	60.500	Cavia_porcellus
ENSTRUG00000005923	yrdc	72	61.616	ENSCCAG00000028891	YRDC	75	55.981	Cebus_capucinus
ENSTRUG00000005923	yrdc	91	51.600	ENSCATG00000036928	YRDC	87	51.200	Cercocebus_atys
ENSTRUG00000005923	yrdc	71	61.421	ENSCLAG00000015012	YRDC	71	58.500	Chinchilla_lanigera
ENSTRUG00000005923	yrdc	91	51.600	ENSCSAG00000001116	YRDC	87	51.200	Chlorocebus_sabaeus
ENSTRUG00000005923	yrdc	50	59.859	ENSCHOG00000005500	YRDC	63	63.359	Choloepus_hoffmanni
ENSTRUG00000005923	yrdc	74	61.765	ENSCPBG00000018446	YRDC	87	61.275	Chrysemys_picta_bellii
ENSTRUG00000005923	yrdc	71	49.515	ENSCING00000007564	-	94	49.515	Ciona_intestinalis
ENSTRUG00000005923	yrdc	80	41.176	ENSCSAVG00000009982	-	94	45.588	Ciona_savignyi
ENSTRUG00000005923	yrdc	91	52.000	ENSCANG00000031111	YRDC	87	52.000	Colobus_angolensis_palliatus
ENSTRUG00000005923	yrdc	72	56.061	ENSCGRG00001000829	-	55	54.040	Cricetulus_griseus_chok1gshd
ENSTRUG00000005923	yrdc	72	61.616	ENSCGRG00001014496	-	71	59.596	Cricetulus_griseus_chok1gshd
ENSTRUG00000005923	yrdc	93	65.385	ENSCSEG00000019075	yrdc	95	65.504	Cynoglossus_semilaevis
ENSTRUG00000005923	yrdc	100	65.556	ENSCVAG00000017355	yrdc	99	65.556	Cyprinodon_variegatus
ENSTRUG00000005923	yrdc	89	65.690	ENSDARG00000041428	yrdc	98	65.690	Danio_rerio
ENSTRUG00000005923	yrdc	73	61.500	ENSDNOG00000038789	-	71	58.000	Dasypus_novemcinctus
ENSTRUG00000005923	yrdc	70	44.898	ENSDNOG00000036198	-	96	44.845	Dasypus_novemcinctus
ENSTRUG00000005923	yrdc	70	62.887	ENSDORG00000008788	Yrdc	86	58.763	Dipodomys_ordii
ENSTRUG00000005923	yrdc	73	48.768	FBgn0061361	CG33786	80	47.739	Drosophila_melanogaster
ENSTRUG00000005923	yrdc	74	46.919	ENSETEG00000003442	YRDC	76	42.925	Echinops_telfairi
ENSTRUG00000005923	yrdc	89	49.167	ENSEBUG00000014080	yrdc	99	47.917	Eptatretus_burgeri
ENSTRUG00000005923	yrdc	73	63.000	ENSEASG00005012253	YRDC	71	61.000	Equus_asinus_asinus
ENSTRUG00000005923	yrdc	73	63.000	ENSECAG00000022522	YRDC	71	61.000	Equus_caballus
ENSTRUG00000005923	yrdc	99	67.279	ENSELUG00000018071	yrdc	86	66.421	Esox_lucius
ENSTRUG00000005923	yrdc	74	58.768	ENSFCAG00000011018	YRDC	75	55.450	Felis_catus
ENSTRUG00000005923	yrdc	70	63.731	ENSFALG00000000964	YRDC	89	60.714	Ficedula_albicollis
ENSTRUG00000005923	yrdc	95	67.969	ENSFHEG00000001029	yrdc	93	68.220	Fundulus_heteroclitus
ENSTRUG00000005923	yrdc	75	74.257	ENSGMOG00000015635	yrdc	97	75.000	Gadus_morhua
ENSTRUG00000005923	yrdc	73	63.000	ENSGALG00000029001	YRDC	78	62.000	Gallus_gallus
ENSTRUG00000005923	yrdc	94	69.804	ENSGAFG00000008396	yrdc	94	69.412	Gambusia_affinis
ENSTRUG00000005923	yrdc	89	70.082	ENSGACG00000013878	yrdc	98	71.849	Gasterosteus_aculeatus
ENSTRUG00000005923	yrdc	76	60.952	ENSGAGG00000014968	YRDC	84	64.103	Gopherus_agassizii
ENSTRUG00000005923	yrdc	91	54.000	ENSGGOG00000007619	YRDC	87	51.200	Gorilla_gorilla
ENSTRUG00000005923	yrdc	95	71.984	ENSHBUG00000009298	yrdc	94	71.595	Haplochromis_burtoni
ENSTRUG00000005923	yrdc	91	53.175	ENSHGLG00000014075	YRDC	87	52.381	Heterocephalus_glaber_female
ENSTRUG00000005923	yrdc	73	61.000	ENSHGLG00100002734	YRDC	72	60.500	Heterocephalus_glaber_male
ENSTRUG00000005923	yrdc	92	63.454	ENSHCOG00000006598	yrdc	96	63.052	Hippocampus_comes
ENSTRUG00000005923	yrdc	89	67.917	ENSIPUG00000014985	yrdc	97	67.917	Ictalurus_punctatus
ENSTRUG00000005923	yrdc	72	63.131	ENSSTOG00000001643	YRDC	71	59.596	Ictidomys_tridecemlineatus
ENSTRUG00000005923	yrdc	95	68.872	ENSKMAG00000013468	yrdc	94	68.872	Kryptolebias_marmoratus
ENSTRUG00000005923	yrdc	95	74.708	ENSLBEG00000027501	yrdc	94	74.708	Labrus_bergylta
ENSTRUG00000005923	yrdc	72	32.381	ENSLACG00000017624	si:ch211-153b23.3	64	31.429	Latimeria_chalumnae
ENSTRUG00000005923	yrdc	89	56.000	ENSLACG00000010689	YRDC	94	62.927	Latimeria_chalumnae
ENSTRUG00000005923	yrdc	88	64.050	ENSLOCG00000003321	yrdc	98	61.826	Lepisosteus_oculatus
ENSTRUG00000005923	yrdc	72	62.121	ENSLAFG00000017556	YRDC	71	58.081	Loxodonta_africana
ENSTRUG00000005923	yrdc	72	59.596	ENSMFAG00000003487	YRDC	93	59.596	Macaca_fascicularis
ENSTRUG00000005923	yrdc	72	59.596	ENSMMUG00000005372	YRDC	65	50.800	Macaca_mulatta
ENSTRUG00000005923	yrdc	91	51.600	ENSMNEG00000029348	YRDC	87	51.200	Macaca_nemestrina
ENSTRUG00000005923	yrdc	53	60.274	ENSMLEG00000041122	YRDC	97	60.274	Mandrillus_leucophaeus
ENSTRUG00000005923	yrdc	92	72.177	ENSMAMG00000007315	yrdc	91	71.774	Mastacembelus_armatus
ENSTRUG00000005923	yrdc	94	72.835	ENSMZEG00005006948	yrdc	93	72.441	Maylandia_zebra
ENSTRUG00000005923	yrdc	72	63.317	ENSMGAG00000002833	YRDC	97	61.307	Meleagris_gallopavo
ENSTRUG00000005923	yrdc	73	63.000	ENSMICG00000031688	YRDC	72	59.000	Microcebus_murinus
ENSTRUG00000005923	yrdc	95	74.319	ENSMMOG00000002119	yrdc	94	73.930	Mola_mola
ENSTRUG00000005923	yrdc	77	57.277	ENSMODG00000017750	YRDC	74	56.522	Monodelphis_domestica
ENSTRUG00000005923	yrdc	93	74.206	ENSMALG00000012471	yrdc	93	74.206	Monopterus_albus
ENSTRUG00000005923	yrdc	67	59.474	MGP_CAROLIEiJ_G0026453	Yrdc	98	60.194	Mus_caroli
ENSTRUG00000005923	yrdc	74	58.294	ENSMUSG00000028889	Yrdc	100	60.952	Mus_musculus
ENSTRUG00000005923	yrdc	87	55.417	MGP_PahariEiJ_G0028784	Yrdc	100	60.952	Mus_pahari
ENSTRUG00000005923	yrdc	74	58.294	MGP_SPRETEiJ_G0027432	Yrdc	71	58.500	Mus_spretus
ENSTRUG00000005923	yrdc	72	62.121	ENSMPUG00000014542	YRDC	79	58.586	Mustela_putorius_furo
ENSTRUG00000005923	yrdc	74	60.766	ENSMLUG00000000955	-	74	57.692	Myotis_lucifugus
ENSTRUG00000005923	yrdc	70	59.585	ENSMLUG00000024310	-	95	56.477	Myotis_lucifugus
ENSTRUG00000005923	yrdc	72	52.525	ENSMLUG00000028796	-	70	51.515	Myotis_lucifugus
ENSTRUG00000005923	yrdc	73	61.000	ENSNGAG00000019099	Yrdc	71	58.500	Nannospalax_galili
ENSTRUG00000005923	yrdc	95	71.875	ENSNBRG00000009475	yrdc	94	71.484	Neolamprologus_brichardi
ENSTRUG00000005923	yrdc	74	60.287	ENSNLEG00000011665	YRDC	71	59.091	Nomascus_leucogenys
ENSTRUG00000005923	yrdc	76	59.615	ENSMEUG00000005068	YRDC	96	57.971	Notamacropus_eugenii
ENSTRUG00000005923	yrdc	87	55.000	ENSODEG00000007401	YRDC	100	60.952	Octodon_degus
ENSTRUG00000005923	yrdc	90	75.620	ENSONIG00000016213	yrdc	99	75.207	Oreochromis_niloticus
ENSTRUG00000005923	yrdc	73	63.500	ENSOCUG00000005384	YRDC	85	51.613	Oryctolagus_cuniculus
ENSTRUG00000005923	yrdc	91	70.204	ENSORLG00000014393	yrdc	92	69.796	Oryzias_latipes
ENSTRUG00000005923	yrdc	91	69.796	ENSORLG00020019663	yrdc	92	69.796	Oryzias_latipes_hni
ENSTRUG00000005923	yrdc	91	69.796	ENSORLG00015004625	yrdc	92	69.796	Oryzias_latipes_hsok
ENSTRUG00000005923	yrdc	91	71.020	ENSOMEG00000018550	yrdc	92	70.204	Oryzias_melastigma
ENSTRUG00000005923	yrdc	72	60.606	ENSOGAG00000030474	YRDC	72	58.586	Otolemur_garnettii
ENSTRUG00000005923	yrdc	73	62.500	ENSOARG00000019873	YRDC	71	59.000	Ovis_aries
ENSTRUG00000005923	yrdc	52	64.583	ENSPPAG00000039722	-	95	61.268	Pan_paniscus
ENSTRUG00000005923	yrdc	74	58.768	ENSPPRG00000007752	YRDC	75	55.450	Panthera_pardus
ENSTRUG00000005923	yrdc	56	60.000	ENSPTIG00000019821	YRDC	67	55.484	Panthera_tigris_altaica
ENSTRUG00000005923	yrdc	91	54.000	ENSPTRG00000000557	YRDC	87	51.200	Pan_troglodytes
ENSTRUG00000005923	yrdc	72	59.596	ENSPANG00000006487	YRDC	65	50.800	Papio_anubis
ENSTRUG00000005923	yrdc	89	67.490	ENSPKIG00000004574	yrdc	87	66.255	Paramormyrops_kingsleyae
ENSTRUG00000005923	yrdc	74	60.976	ENSPSIG00000006483	YRDC	72	60.784	Pelodiscus_sinensis
ENSTRUG00000005923	yrdc	97	69.434	ENSPMGG00000004184	yrdc	95	70.683	Periophthalmus_magnuspinnatus
ENSTRUG00000005923	yrdc	64	59.887	ENSPEMG00000016985	Yrdc	77	57.062	Peromyscus_maniculatus_bairdii
ENSTRUG00000005923	yrdc	64	57.627	ENSPMAG00000002905	yrdc	96	55.932	Petromyzon_marinus
ENSTRUG00000005923	yrdc	80	55.909	ENSPCIG00000025731	YRDC	74	56.522	Phascolarctos_cinereus
ENSTRUG00000005923	yrdc	94	71.373	ENSPFOG00000023097	yrdc	94	70.588	Poecilia_formosa
ENSTRUG00000005923	yrdc	94	70.588	ENSPLAG00000020882	yrdc	94	70.196	Poecilia_latipinna
ENSTRUG00000005923	yrdc	94	70.980	ENSPMEG00000013237	yrdc	94	70.588	Poecilia_mexicana
ENSTRUG00000005923	yrdc	94	70.196	ENSPREG00000005285	yrdc	94	69.804	Poecilia_reticulata
ENSTRUG00000005923	yrdc	74	60.287	ENSPPYG00000001523	-	81	59.596	Pongo_abelii
ENSTRUG00000005923	yrdc	87	54.435	ENSPCAG00000016850	YRDC	89	53.226	Procavia_capensis
ENSTRUG00000005923	yrdc	73	63.000	ENSPCOG00000013214	YRDC	72	59.000	Propithecus_coquereli
ENSTRUG00000005923	yrdc	86	54.694	ENSPVAG00000010147	YRDC	76	56.398	Pteropus_vampyrus
ENSTRUG00000005923	yrdc	95	71.595	ENSPNYG00000013956	yrdc	94	71.206	Pundamilia_nyererei
ENSTRUG00000005923	yrdc	85	67.227	ENSPNAG00000015625	yrdc	96	66.667	Pygocentrus_nattereri
ENSTRUG00000005923	yrdc	73	60.500	ENSRNOG00000025424	Yrdc	71	58.500	Rattus_norvegicus
ENSTRUG00000005923	yrdc	91	52.000	ENSRBIG00000032289	YRDC	87	51.600	Rhinopithecus_bieti
ENSTRUG00000005923	yrdc	72	60.101	ENSRROG00000039370	YRDC	67	59.596	Rhinopithecus_roxellana
ENSTRUG00000005923	yrdc	73	60.396	ENSSBOG00000018937	YRDC	86	57.426	Saimiri_boliviensis_boliviensis
ENSTRUG00000005923	yrdc	52	63.889	ENSSHAG00000013957	-	97	61.111	Sarcophilus_harrisii
ENSTRUG00000005923	yrdc	81	68.610	ENSSFOG00015006128	yrdc	89	70.192	Scleropages_formosus
ENSTRUG00000005923	yrdc	90	74.486	ENSSMAG00000005195	yrdc	95	73.333	Scophthalmus_maximus
ENSTRUG00000005923	yrdc	51	35.570	ENSSDUG00000006736	-	77	34.868	Seriola_dumerili
ENSTRUG00000005923	yrdc	95	73.152	ENSSDUG00000009775	yrdc	95	73.152	Seriola_dumerili
ENSTRUG00000005923	yrdc	95	73.152	ENSSLDG00000003196	yrdc	95	73.152	Seriola_lalandi_dorsalis
ENSTRUG00000005923	yrdc	74	64.532	ENSSPUG00000003946	YRDC	79	63.547	Sphenodon_punctatus
ENSTRUG00000005923	yrdc	99	70.412	ENSSPAG00000012559	yrdc	96	70.412	Stegastes_partitus
ENSTRUG00000005923	yrdc	72	62.626	ENSSSCG00000040425	YRDC	71	58.586	Sus_scrofa
ENSTRUG00000005923	yrdc	52	66.207	ENSTGUG00000001507	YRDC	99	63.448	Taeniopygia_guttata
ENSTRUG00000005923	yrdc	56	61.039	ENSTBEG00000008863	YRDC	98	61.039	Tupaia_belangeri
ENSTRUG00000005923	yrdc	51	64.085	ENSTTRG00000013538	-	95	61.268	Tursiops_truncatus
ENSTRUG00000005923	yrdc	72	62.121	ENSUAMG00000006150	YRDC	98	58.586	Ursus_americanus
ENSTRUG00000005923	yrdc	86	44.492	ENSVPAG00000006642	YRDC	83	46.429	Vicugna_pacos
ENSTRUG00000005923	yrdc	76	64.904	ENSXETG00000014420	yrdc	87	62.500	Xenopus_tropicalis
ENSTRUG00000005923	yrdc	89	71.667	ENSXCOG00000000829	yrdc	99	71.250	Xiphophorus_couchianus
ENSTRUG00000005923	yrdc	94	70.980	ENSXMAG00000014606	yrdc	89	70.588	Xiphophorus_maculatus