EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTRUG00000006254 (Gene tree)
Gene ID: 101062788
Gene Symbol: arl1
Alias: zgc:92883
Full Name: ADP ribosylation factor like GTPase 1
Gene Type: protein_coding
Species: Takifugu_rubripes
Status: putative
Strand: Minus strand
Length: 2052 bases
Position: chr18:7473914-7475965
Accession: 101062788
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTRUP00000054212	MMR_HSR1	PF01926.23	2.4e-05	1	1
ENSTRUP00000015269	MMR_HSR1	PF01926.23	2.4e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTRUT00000051420	-	851	XM_003972944	ENSTRUP00000054212	181 (aa)	XP_003972993	UPI000298B3AC
ENSTRUT00000015338	-	546	-	ENSTRUP00000015269	181 (aa)	-	H2SS82

Gene Model

Click here to download ENSTRUG00000006254's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTRUG00000006254's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTRUG00000006254	arl1	92	40.230	ENSTRUG00000003183	-	93	39.444
ENSTRUG00000006254	arl1	100	55.249	ENSTRUG00000007465	arf3	100	55.249
ENSTRUG00000006254	arl1	99	47.222	ENSTRUG00000014614	arl5a	100	47.222
ENSTRUG00000006254	arl1	96	34.409	ENSTRUG00000009319	arfrp1	92	34.409
ENSTRUG00000006254	arl1	94	46.199	ENSTRUG00000022814	arl5c	96	46.199
ENSTRUG00000006254	arl1	80	54.483	ENSTRUG00000025171	-	90	54.483
ENSTRUG00000006254	arl1	96	50.867	ENSTRUG00000020453	arl8	96	50.867
ENSTRUG00000006254	arl1	92	44.578	ENSTRUG00000018107	arl3	91	44.578
ENSTRUG00000006254	arl1	91	46.667	ENSTRUG00000005435	arl2	90	46.667
ENSTRUG00000006254	arl1	86	31.138	ENSTRUG00000007269	sar1ab	84	31.138
ENSTRUG00000006254	arl1	81	55.479	ENSTRUG00000020509	-	76	55.479
ENSTRUG00000006254	arl1	98	39.227	ENSTRUG00000017239	ARL6	98	39.227
ENSTRUG00000006254	arl1	96	41.341	ENSTRUG00000003085	arl4cb	93	41.341
ENSTRUG00000006254	arl1	98	54.237	ENSTRUG00000025462	-	99	54.237
ENSTRUG00000006254	arl1	77	55.000	ENSTRUG00000024749	-	100	55.000
ENSTRUG00000006254	arl1	87	41.975	ENSTRUG00000003716	-	69	41.975
ENSTRUG00000006254	arl1	96	31.034	ENSTRUG00000023169	arl8ba	94	31.034
ENSTRUG00000006254	arl1	90	31.214	ENSTRUG00000013035	-	67	31.214
ENSTRUG00000006254	arl1	96	32.184	ENSTRUG00000011496	arl8bb	94	32.184
ENSTRUG00000006254	arl1	96	31.034	ENSTRUG00000013912	arl8a	93	31.034
ENSTRUG00000006254	arl1	99	57.778	ENSTRUG00000014380	-	99	57.778
ENSTRUG00000006254	arl1	87	31.361	ENSTRUG00000003641	arl13b	63	31.361
ENSTRUG00000006254	arl1	100	55.249	ENSTRUG00000011190	arf3	100	55.249
ENSTRUG00000006254	arl1	100	38.021	ENSTRUG00000024375	-	95	38.021
ENSTRUG00000006254	arl1	97	42.373	ENSTRUG00000004035	arl3l2	95	42.373
ENSTRUG00000006254	arl1	92	41.860	ENSTRUG00000008027	arl4aa	87	41.860
ENSTRUG00000006254	arl1	92	43.373	ENSTRUG00000018668	-	83	43.373
ENSTRUG00000006254	arl1	83	46.358	ENSTRUG00000011561	arl11	88	45.395
ENSTRUG00000006254	arl1	100	57.459	ENSTRUG00000023041	-	100	57.459
ENSTRUG00000006254	arl1	98	59.322	ENSTRUG00000019870	-	98	59.322

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTRUG00000006254	arl1	92	91.617	ENSG00000120805	ARL1	100	91.463	Homo_sapiens
ENSTRUG00000006254	arl1	100	95.028	ENSAPOG00000002469	arl1	100	95.028	Acanthochromis_polyacanthus
ENSTRUG00000006254	arl1	92	91.617	ENSAMEG00000016452	ARL1	99	91.111	Ailuropoda_melanoleuca
ENSTRUG00000006254	arl1	99	93.855	ENSACIG00000007953	arl1	100	93.855	Amphilophus_citrinellus
ENSTRUG00000006254	arl1	100	95.028	ENSAOCG00000013008	arl1	100	95.028	Amphiprion_ocellaris
ENSTRUG00000006254	arl1	100	95.028	ENSAPEG00000013187	arl1	100	95.028	Amphiprion_percula
ENSTRUG00000006254	arl1	99	95.531	ENSATEG00000005559	arl1	97	95.000	Anabas_testudineus
ENSTRUG00000006254	arl1	100	91.713	ENSAPLG00000016092	ARL1	100	91.713	Anas_platyrhynchos
ENSTRUG00000006254	arl1	100	92.818	ENSACAG00000011602	ARL1	100	92.818	Anolis_carolinensis
ENSTRUG00000006254	arl1	92	92.216	ENSANAG00000023491	ARL1	100	91.713	Aotus_nancymaae
ENSTRUG00000006254	arl1	100	96.133	ENSACLG00000008188	arl1	100	96.133	Astatotilapia_calliptera
ENSTRUG00000006254	arl1	100	95.580	ENSAMXG00000021056	arl1	100	95.580	Astyanax_mexicanus
ENSTRUG00000006254	arl1	92	92.216	ENSBTAG00000011883	ARL1	100	91.713	Bos_taurus
ENSTRUG00000006254	arl1	100	72.376	WBGene00000187	arl-1	100	72.376	Caenorhabditis_elegans
ENSTRUG00000006254	arl1	92	92.216	ENSCJAG00000001966	ARL1	100	91.713	Callithrix_jacchus
ENSTRUG00000006254	arl1	92	92.216	ENSCAFG00000006992	ARL1	100	91.713	Canis_familiaris
ENSTRUG00000006254	arl1	92	92.216	ENSCAFG00020024333	ARL1	100	91.713	Canis_lupus_dingo
ENSTRUG00000006254	arl1	94	92.353	ENSCHIG00000024524	ARL1	100	92.353	Capra_hircus
ENSTRUG00000006254	arl1	93	92.262	ENSTSYG00000013257	-	100	91.620	Carlito_syrichta
ENSTRUG00000006254	arl1	76	93.478	ENSCAPG00000001010	ARL1	100	93.478	Cavia_aperea
ENSTRUG00000006254	arl1	92	92.216	ENSCPOG00000026014	ARL1	100	91.713	Cavia_porcellus
ENSTRUG00000006254	arl1	92	92.216	ENSCCAG00000025938	ARL1	100	91.713	Cebus_capucinus
ENSTRUG00000006254	arl1	92	92.216	ENSCLAG00000008180	ARL1	100	91.160	Chinchilla_lanigera
ENSTRUG00000006254	arl1	92	91.617	ENSCSAG00000003368	ARL1	100	91.160	Chlorocebus_sabaeus
ENSTRUG00000006254	arl1	100	91.160	ENSCPBG00000004906	ARL1	100	91.160	Chrysemys_picta_bellii
ENSTRUG00000006254	arl1	93	44.118	ENSCING00000004577	-	97	44.118	Ciona_intestinalis
ENSTRUG00000006254	arl1	99	80.000	ENSCING00000019794	-	100	80.000	Ciona_intestinalis
ENSTRUG00000006254	arl1	99	79.444	ENSCSAVG00000007620	-	98	79.444	Ciona_savignyi
ENSTRUG00000006254	arl1	92	91.018	ENSCANG00000033548	ARL1	100	90.608	Colobus_angolensis_palliatus
ENSTRUG00000006254	arl1	92	92.814	ENSCGRG00001010446	Arl1	100	92.265	Cricetulus_griseus_chok1gshd
ENSTRUG00000006254	arl1	92	92.216	ENSCGRG00000009856	Arl1	90	91.160	Cricetulus_griseus_crigri
ENSTRUG00000006254	arl1	100	95.028	ENSCVAG00000001731	arl1	100	95.028	Cyprinodon_variegatus
ENSTRUG00000006254	arl1	100	96.133	ENSDARG00000101680	arl1	100	96.491	Danio_rerio
ENSTRUG00000006254	arl1	92	92.216	ENSDORG00000014770	Arl1	95	91.160	Dipodomys_ordii
ENSTRUG00000006254	arl1	100	77.348	FBgn0000115	Arl1	100	77.348	Drosophila_melanogaster
ENSTRUG00000006254	arl1	98	88.764	ENSETEG00000020310	ARL1	100	88.764	Echinops_telfairi
ENSTRUG00000006254	arl1	92	92.216	ENSEASG00005020057	ARL1	100	91.713	Equus_asinus_asinus
ENSTRUG00000006254	arl1	98	89.503	ENSECAG00000000372	ARL1	100	91.713	Equus_caballus
ENSTRUG00000006254	arl1	100	95.028	ENSELUG00000001287	-	100	95.028	Esox_lucius
ENSTRUG00000006254	arl1	100	93.923	ENSELUG00000018440	arl1	100	93.923	Esox_lucius
ENSTRUG00000006254	arl1	92	92.216	ENSFCAG00000030871	ARL1	100	91.713	Felis_catus
ENSTRUG00000006254	arl1	100	92.265	ENSFALG00000011156	ARL1	100	92.265	Ficedula_albicollis
ENSTRUG00000006254	arl1	92	92.216	ENSFDAG00000016393	ARL1	100	91.160	Fukomys_damarensis
ENSTRUG00000006254	arl1	99	95.531	ENSFHEG00000004171	arl1	95	95.531	Fundulus_heteroclitus
ENSTRUG00000006254	arl1	100	95.028	ENSGMOG00000006859	arl1	100	95.028	Gadus_morhua
ENSTRUG00000006254	arl1	100	92.265	ENSGALG00000011651	ARL1	100	92.265	Gallus_gallus
ENSTRUG00000006254	arl1	91	95.758	ENSGAFG00000006973	arl1	99	95.758	Gambusia_affinis
ENSTRUG00000006254	arl1	100	92.265	ENSGACG00000019098	arl1	100	92.265	Gasterosteus_aculeatus
ENSTRUG00000006254	arl1	92	91.617	ENSGGOG00000010788	ARL1	100	91.160	Gorilla_gorilla
ENSTRUG00000006254	arl1	100	96.133	ENSHBUG00000010636	arl1	100	96.133	Haplochromis_burtoni
ENSTRUG00000006254	arl1	92	92.814	ENSHGLG00000004909	ARL1	100	92.265	Heterocephalus_glaber_female
ENSTRUG00000006254	arl1	92	92.814	ENSHGLG00100001832	ARL1	100	91.713	Heterocephalus_glaber_male
ENSTRUG00000006254	arl1	100	95.580	ENSHCOG00000005566	arl1	100	95.580	Hippocampus_comes
ENSTRUG00000006254	arl1	99	94.972	ENSIPUG00000013834	arl1	96	94.972	Ictalurus_punctatus
ENSTRUG00000006254	arl1	92	92.216	ENSSTOG00000016022	ARL1	100	91.713	Ictidomys_tridecemlineatus
ENSTRUG00000006254	arl1	92	83.234	ENSJJAG00000000452	-	100	82.873	Jaculus_jaculus
ENSTRUG00000006254	arl1	86	96.774	ENSKMAG00000005931	arl1	84	96.774	Kryptolebias_marmoratus
ENSTRUG00000006254	arl1	96	94.253	ENSLBEG00000000991	arl1	99	94.253	Labrus_bergylta
ENSTRUG00000006254	arl1	92	92.216	ENSLAFG00000026143	ARL1	95	91.713	Loxodonta_africana
ENSTRUG00000006254	arl1	92	91.617	ENSMFAG00000035725	ARL1	100	91.160	Macaca_fascicularis
ENSTRUG00000006254	arl1	92	91.617	ENSMMUG00000031610	ARL1	100	90.608	Macaca_mulatta
ENSTRUG00000006254	arl1	92	91.617	ENSMNEG00000007067	ARL1	100	91.160	Macaca_nemestrina
ENSTRUG00000006254	arl1	91	91.463	ENSMLEG00000036143	ARL1	100	91.463	Mandrillus_leucophaeus
ENSTRUG00000006254	arl1	99	93.855	ENSMAMG00000001968	arl1	100	93.855	Mastacembelus_armatus
ENSTRUG00000006254	arl1	100	96.133	ENSMZEG00005018136	arl1	100	96.133	Maylandia_zebra
ENSTRUG00000006254	arl1	100	91.713	ENSMGAG00000011748	ARL1	100	91.713	Meleagris_gallopavo
ENSTRUG00000006254	arl1	92	92.814	ENSMAUG00000021923	Arl1	100	92.265	Mesocricetus_auratus
ENSTRUG00000006254	arl1	92	92.216	ENSMICG00000015801	ARL1	100	91.713	Microcebus_murinus
ENSTRUG00000006254	arl1	92	92.814	ENSMOCG00000005852	Arl1	100	92.265	Microtus_ochrogaster
ENSTRUG00000006254	arl1	96	93.678	ENSMMOG00000003353	arl1	69	93.678	Mola_mola
ENSTRUG00000006254	arl1	100	91.160	ENSMODG00000003056	ARL1	100	91.160	Monodelphis_domestica
ENSTRUG00000006254	arl1	99	92.737	ENSMALG00000003003	arl1	99	95.152	Monopterus_albus
ENSTRUG00000006254	arl1	92	92.814	MGP_CAROLIEiJ_G0015712	Arl1	100	92.265	Mus_caroli
ENSTRUG00000006254	arl1	92	92.814	ENSMUSG00000060904	Arl1	100	94.203	Mus_musculus
ENSTRUG00000006254	arl1	92	92.814	MGP_PahariEiJ_G0031373	Arl1	100	92.265	Mus_pahari
ENSTRUG00000006254	arl1	92	92.814	MGP_SPRETEiJ_G0016530	Arl1	100	92.265	Mus_spretus
ENSTRUG00000006254	arl1	92	91.667	ENSMPUG00000011822	ARL1	99	91.160	Mustela_putorius_furo
ENSTRUG00000006254	arl1	87	93.038	ENSMLUG00000002351	-	100	91.860	Myotis_lucifugus
ENSTRUG00000006254	arl1	92	88.024	ENSMLUG00000025321	-	100	87.845	Myotis_lucifugus
ENSTRUG00000006254	arl1	76	94.203	ENSNGAG00000007879	-	100	94.203	Nannospalax_galili
ENSTRUG00000006254	arl1	100	96.133	ENSNBRG00000019783	arl1	100	96.133	Neolamprologus_brichardi
ENSTRUG00000006254	arl1	91	91.463	ENSNLEG00000006223	ARL1	100	91.463	Nomascus_leucogenys
ENSTRUG00000006254	arl1	100	91.160	ENSMEUG00000015525	ARL1	95	91.160	Notamacropus_eugenii
ENSTRUG00000006254	arl1	92	92.814	ENSODEG00000019783	-	100	92.265	Octodon_degus
ENSTRUG00000006254	arl1	92	92.814	ENSODEG00000010531	-	100	92.222	Octodon_degus
ENSTRUG00000006254	arl1	92	91.018	ENSODEG00000019880	-	100	90.608	Octodon_degus
ENSTRUG00000006254	arl1	100	96.133	ENSONIG00000009921	arl1	100	96.133	Oreochromis_niloticus
ENSTRUG00000006254	arl1	92	92.216	ENSOCUG00000002217	ARL1	96	91.713	Oryctolagus_cuniculus
ENSTRUG00000006254	arl1	92	95.181	ENSORLG00000008909	arl1	98	95.181	Oryzias_latipes
ENSTRUG00000006254	arl1	100	96.133	ENSORLG00020005754	arl1	100	96.133	Oryzias_latipes_hni
ENSTRUG00000006254	arl1	100	96.133	ENSORLG00015002736	arl1	100	96.133	Oryzias_latipes_hsok
ENSTRUG00000006254	arl1	96	95.977	ENSOMEG00000023497	arl1	93	95.977	Oryzias_melastigma
ENSTRUG00000006254	arl1	92	91.617	ENSOGAG00000015144	ARL1	100	91.160	Otolemur_garnettii
ENSTRUG00000006254	arl1	92	92.216	ENSOARG00000015007	ARL1	100	91.713	Ovis_aries
ENSTRUG00000006254	arl1	92	91.617	ENSPPAG00000034860	ARL1	100	91.160	Pan_paniscus
ENSTRUG00000006254	arl1	92	92.216	ENSPPRG00000023908	ARL1	100	91.713	Panthera_pardus
ENSTRUG00000006254	arl1	93	92.262	ENSPTIG00000002154	-	100	91.620	Panthera_tigris_altaica
ENSTRUG00000006254	arl1	92	91.617	ENSPTRG00000005350	ARL1	100	91.160	Pan_troglodytes
ENSTRUG00000006254	arl1	96	90.805	ENSPANG00000018816	ARL1	97	91.061	Papio_anubis
ENSTRUG00000006254	arl1	100	95.028	ENSPKIG00000007118	arl1	100	95.732	Paramormyrops_kingsleyae
ENSTRUG00000006254	arl1	100	91.713	ENSPSIG00000006539	ARL1	100	91.713	Pelodiscus_sinensis
ENSTRUG00000006254	arl1	91	92.121	ENSPMGG00000004070	arl1	98	92.121	Periophthalmus_magnuspinnatus
ENSTRUG00000006254	arl1	92	92.814	ENSPEMG00000008781	Arl1	100	92.265	Peromyscus_maniculatus_bairdii
ENSTRUG00000006254	arl1	100	90.608	ENSPMAG00000002070	arl1	100	90.608	Petromyzon_marinus
ENSTRUG00000006254	arl1	99	91.111	ENSPCIG00000009683	-	97	91.111	Phascolarctos_cinereus
ENSTRUG00000006254	arl1	100	95.580	ENSPFOG00000003241	arl1	100	95.580	Poecilia_formosa
ENSTRUG00000006254	arl1	100	95.580	ENSPLAG00000012898	arl1	100	95.580	Poecilia_latipinna
ENSTRUG00000006254	arl1	99	95.556	ENSPMEG00000005938	arl1	96	95.556	Poecilia_mexicana
ENSTRUG00000006254	arl1	99	95.556	ENSPREG00000013361	arl1	96	95.556	Poecilia_reticulata
ENSTRUG00000006254	arl1	92	91.617	ENSPPYG00000004872	ARL1	100	91.160	Pongo_abelii
ENSTRUG00000006254	arl1	100	88.398	ENSPCOG00000015554	-	100	88.398	Propithecus_coquereli
ENSTRUG00000006254	arl1	92	92.216	ENSPVAG00000008119	ARL1	95	91.713	Pteropus_vampyrus
ENSTRUG00000006254	arl1	100	96.133	ENSPNYG00000011671	arl1	100	96.133	Pundamilia_nyererei
ENSTRUG00000006254	arl1	91	95.758	ENSPNAG00000028795	arl1	99	95.758	Pygocentrus_nattereri
ENSTRUG00000006254	arl1	92	92.814	ENSRNOG00000005763	Arl1	100	92.265	Rattus_norvegicus
ENSTRUG00000006254	arl1	92	91.617	ENSRBIG00000042560	ARL1	100	91.160	Rhinopithecus_bieti
ENSTRUG00000006254	arl1	92	91.617	ENSRROG00000037996	ARL1	100	91.160	Rhinopithecus_roxellana
ENSTRUG00000006254	arl1	92	92.216	ENSSBOG00000024352	-	100	91.713	Saimiri_boliviensis_boliviensis
ENSTRUG00000006254	arl1	100	90.608	ENSSHAG00000004634	ARL1	100	90.608	Sarcophilus_harrisii
ENSTRUG00000006254	arl1	100	95.028	ENSSFOG00015001665	arl1	100	95.028	Scleropages_formosus
ENSTRUG00000006254	arl1	100	94.475	ENSSMAG00000016416	arl1	100	94.475	Scophthalmus_maximus
ENSTRUG00000006254	arl1	93	92.899	ENSSDUG00000013898	arl1	95	92.899	Seriola_dumerili
ENSTRUG00000006254	arl1	100	95.028	ENSSLDG00000012946	arl1	100	95.028	Seriola_lalandi_dorsalis
ENSTRUG00000006254	arl1	93	91.071	ENSSARG00000013944	ARL1	100	90.503	Sorex_araneus
ENSTRUG00000006254	arl1	100	92.818	ENSSPUG00000004578	ARL1	100	92.818	Sphenodon_punctatus
ENSTRUG00000006254	arl1	100	94.475	ENSSPAG00000014633	arl1	100	94.475	Stegastes_partitus
ENSTRUG00000006254	arl1	92	92.216	ENSSSCG00000000870	ARL1	100	91.713	Sus_scrofa
ENSTRUG00000006254	arl1	99	92.179	ENSTGUG00000009085	-	100	92.179	Taeniopygia_guttata
ENSTRUG00000006254	arl1	100	99.448	ENSTNIG00000006920	arl1	99	99.448	Tetraodon_nigroviridis
ENSTRUG00000006254	arl1	92	90.476	ENSTBEG00000015546	ARL1	100	90.110	Tupaia_belangeri
ENSTRUG00000006254	arl1	92	92.216	ENSTTRG00000017202	ARL1	95	91.713	Tursiops_truncatus
ENSTRUG00000006254	arl1	92	92.216	ENSUMAG00000019547	ARL1	100	91.713	Ursus_maritimus
ENSTRUG00000006254	arl1	92	92.216	ENSVPAG00000011621	ARL1	95	91.713	Vicugna_pacos
ENSTRUG00000006254	arl1	92	92.216	ENSVVUG00000018044	ARL1	100	91.713	Vulpes_vulpes
ENSTRUG00000006254	arl1	92	94.012	ENSXETG00000002540	arl1	100	93.370	Xenopus_tropicalis
ENSTRUG00000006254	arl1	99	93.855	ENSXMAG00000028338	arl1	100	93.855	Xiphophorus_maculatus