EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTRUG00000006280 (Gene tree)
Gene ID: 101075655
Gene Symbol: -
Alias: -
Full Name: poly(rC) binding protein 3
Gene Type: protein_coding
Species: Takifugu_rubripes
Status: putative
Strand: Plus strand
Length: 9267 bases
Position: chr1:20420255-20429521
Accession: 101075655
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTRUP00000015333	KH_1	PF00013.29	1.2e-48	1	3
ENSTRUP00000015333	KH_1	PF00013.29	1.2e-48	2	3
ENSTRUP00000015333	KH_1	PF00013.29	1.2e-48	3	3
ENSTRUP00000015333	KH_2	PF07650.17	1.4e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTRUT00000015402	-	945	XM_003962110	ENSTRUP00000015333	314 (aa)	XP_003962159	H2SSE6

Gene Model

Click here to download ENSTRUG00000006280's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTRUG00000006280's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTRUG00000006280	-	64	41.270	ENSTRUG00000013259	-	67	41.270
ENSTRUG00000006280	-	89	39.437	ENSTRUG00000016275	-	58	39.437
ENSTRUG00000006280	-	85	82.692	ENSTRUG00000017789	zgc:110045	86	82.692
ENSTRUG00000006280	-	73	51.429	ENSTRUG00000000535	hnrpkl	55	51.429
ENSTRUG00000006280	-	89	33.333	ENSTRUG00000009908	igf2bp2b	58	33.333
ENSTRUG00000006280	-	74	50.000	ENSTRUG00000010659	hnrnpk	52	50.000
ENSTRUG00000006280	-	86	60.000	ENSTRUG00000007426	-	68	60.000
ENSTRUG00000006280	-	91	77.972	ENSTRUG00000009361	pcbp2	89	77.972
ENSTRUG00000006280	-	89	93.127	ENSTRUG00000013604	pcbp3	86	93.127
ENSTRUG00000006280	-	88	40.000	ENSTRUG00000018658	fubp3	65	40.000
ENSTRUG00000006280	-	96	69.737	ENSTRUG00000011419	PCBP2	90	74.576

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTRUG00000006280	-	99	90.654	ENSAPOG00000016582	-	91	99.281	Acanthochromis_polyacanthus
ENSTRUG00000006280	-	98	89.610	ENSAPOG00000020003	pcbp3	87	89.610	Acanthochromis_polyacanthus
ENSTRUG00000006280	-	92	90.879	ENSAMEG00000001697	-	96	86.335	Ailuropoda_melanoleuca
ENSTRUG00000006280	-	99	90.062	ENSACIG00000002739	-	99	90.062	Amphilophus_citrinellus
ENSTRUG00000006280	-	99	82.883	ENSACIG00000010933	pcbp3	97	82.883	Amphilophus_citrinellus
ENSTRUG00000006280	-	88	97.473	ENSAOCG00000008592	-	93	97.473	Amphiprion_ocellaris
ENSTRUG00000006280	-	89	94.881	ENSAOCG00000007806	-	100	94.881	Amphiprion_ocellaris
ENSTRUG00000006280	-	89	89.109	ENSAPEG00000008011	pcbp3	91	89.109	Amphiprion_percula
ENSTRUG00000006280	-	99	92.089	ENSAPEG00000005209	-	99	92.089	Amphiprion_percula
ENSTRUG00000006280	-	96	84.830	ENSATEG00000015787	-	99	84.830	Anabas_testudineus
ENSTRUG00000006280	-	99	92.971	ENSATEG00000009833	-	99	92.971	Anabas_testudineus
ENSTRUG00000006280	-	92	92.384	ENSAPLG00000002975	-	96	92.384	Anas_platyrhynchos
ENSTRUG00000006280	-	89	76.074	ENSAPLG00000008951	-	77	76.074	Anas_platyrhynchos
ENSTRUG00000006280	-	92	82.637	ENSACAG00000009819	-	95	82.637	Anolis_carolinensis
ENSTRUG00000006280	-	92	84.592	ENSACAG00000004607	-	96	84.592	Anolis_carolinensis
ENSTRUG00000006280	-	76	96.639	ENSANAG00000030702	-	100	96.639	Aotus_nancymaae
ENSTRUG00000006280	-	91	87.179	ENSACLG00000011835	pcbp3	93	87.179	Astatotilapia_calliptera
ENSTRUG00000006280	-	99	92.628	ENSACLG00000003801	-	95	98.958	Astatotilapia_calliptera
ENSTRUG00000006280	-	89	91.030	ENSAMXG00000003440	pcbp3	86	91.030	Astyanax_mexicanus
ENSTRUG00000006280	-	85	70.408	ENSAMXG00000001760	zgc:110045	66	70.408	Astyanax_mexicanus
ENSTRUG00000006280	-	96	88.372	ENSAMXG00000013588	-	99	88.372	Astyanax_mexicanus
ENSTRUG00000006280	-	84	96.552	ENSCAFG00020019472	-	79	96.552	Canis_lupus_dingo
ENSTRUG00000006280	-	92	97.222	ENSCSAG00000007440	-	87	97.222	Chlorocebus_sabaeus
ENSTRUG00000006280	-	89	97.482	ENSCPBG00000012151	-	96	90.909	Chrysemys_picta_bellii
ENSTRUG00000006280	-	89	82.392	ENSCPBG00000000733	-	71	82.392	Chrysemys_picta_bellii
ENSTRUG00000006280	-	92	80.255	ENSCSEG00000016984	-	93	80.255	Cynoglossus_semilaevis
ENSTRUG00000006280	-	96	90.000	ENSCSEG00000000822	pcbp3	98	90.000	Cynoglossus_semilaevis
ENSTRUG00000006280	-	99	92.429	ENSCVAG00000005262	-	99	92.429	Cyprinodon_variegatus
ENSTRUG00000006280	-	89	88.779	ENSCVAG00000014482	pcbp3	91	88.779	Cyprinodon_variegatus
ENSTRUG00000006280	-	92	91.961	ENSDARG00000054378	pcbp3	96	91.961	Danio_rerio
ENSTRUG00000006280	-	96	81.126	ENSETEG00000015988	-	95	81.126	Echinops_telfairi
ENSTRUG00000006280	-	92	80.479	ENSEBUG00000007485	-	81	81.443	Eptatretus_burgeri
ENSTRUG00000006280	-	85	68.636	ENSEBUG00000005495	pcbp3	66	68.636	Eptatretus_burgeri
ENSTRUG00000006280	-	89	73.929	ENSEBUG00000016192	pcbp3	99	74.349	Eptatretus_burgeri
ENSTRUG00000006280	-	89	98.561	ENSELUG00000001560	-	82	98.561	Esox_lucius
ENSTRUG00000006280	-	89	91.519	ENSELUG00000003521	pcbp3	91	90.066	Esox_lucius
ENSTRUG00000006280	-	92	96.181	ENSFALG00000003949	-	96	96.181	Ficedula_albicollis
ENSTRUG00000006280	-	89	76.074	ENSFALG00000004411	-	73	76.074	Ficedula_albicollis
ENSTRUG00000006280	-	99	92.744	ENSFHEG00000006539	-	99	92.744	Fundulus_heteroclitus
ENSTRUG00000006280	-	96	90.759	ENSFHEG00000016615	pcbp3	95	90.759	Fundulus_heteroclitus
ENSTRUG00000006280	-	89	79.139	ENSGMOG00000011992	pcbp3	92	79.139	Gadus_morhua
ENSTRUG00000006280	-	89	71.000	ENSGMOG00000008611	-	91	71.000	Gadus_morhua
ENSTRUG00000006280	-	100	78.947	ENSGALG00000004394	-	98	89.674	Gallus_gallus
ENSTRUG00000006280	-	90	81.699	ENSGALG00000013155	-	93	81.699	Gallus_gallus
ENSTRUG00000006280	-	91	87.987	ENSGAFG00000011430	pcbp3	89	87.987	Gambusia_affinis
ENSTRUG00000006280	-	89	98.921	ENSGAFG00000010274	-	91	98.921	Gambusia_affinis
ENSTRUG00000006280	-	92	77.946	ENSGACG00000014955	-	96	77.946	Gasterosteus_aculeatus
ENSTRUG00000006280	-	92	91.586	ENSGACG00000002266	-	96	91.586	Gasterosteus_aculeatus
ENSTRUG00000006280	-	79	81.579	ENSGAGG00000006956	-	78	81.579	Gopherus_agassizii
ENSTRUG00000006280	-	85	89.139	ENSGAGG00000000271	-	100	89.139	Gopherus_agassizii
ENSTRUG00000006280	-	99	92.628	ENSHBUG00000021782	-	95	98.958	Haplochromis_burtoni
ENSTRUG00000006280	-	88	96.751	ENSHBUG00000010697	pcbp3	88	96.751	Haplochromis_burtoni
ENSTRUG00000006280	-	92	93.750	ENSHCOG00000006067	-	95	93.750	Hippocampus_comes
ENSTRUG00000006280	-	89	89.073	ENSHCOG00000017868	pcbp3	91	89.073	Hippocampus_comes
ENSTRUG00000006280	-	99	92.628	ENSIPUG00000006238	pcbp3	99	92.628	Ictalurus_punctatus
ENSTRUG00000006280	-	89	98.561	ENSKMAG00000018530	-	91	98.561	Kryptolebias_marmoratus
ENSTRUG00000006280	-	89	89.109	ENSKMAG00000003046	pcbp3	91	89.109	Kryptolebias_marmoratus
ENSTRUG00000006280	-	98	89.320	ENSLBEG00000006201	pcbp3	97	89.320	Labrus_bergylta
ENSTRUG00000006280	-	99	78.125	ENSLBEG00000006542	-	99	78.125	Labrus_bergylta
ENSTRUG00000006280	-	89	82.407	ENSLACG00000010386	pcbp3	72	82.407	Latimeria_chalumnae
ENSTRUG00000006280	-	89	76.161	ENSLACG00000010804	zgc:110045	72	76.161	Latimeria_chalumnae
ENSTRUG00000006280	-	89	81.728	ENSLOCG00000005058	zgc:110045	78	81.728	Lepisosteus_oculatus
ENSTRUG00000006280	-	92	91.234	ENSLOCG00000009369	pcbp3	96	91.234	Lepisosteus_oculatus
ENSTRUG00000006280	-	96	90.429	ENSMAMG00000022336	pcbp3	93	90.429	Mastacembelus_armatus
ENSTRUG00000006280	-	99	92.013	ENSMAMG00000011620	-	99	92.013	Mastacembelus_armatus
ENSTRUG00000006280	-	96	84.345	ENSMZEG00005014882	-	99	81.232	Maylandia_zebra
ENSTRUG00000006280	-	91	87.742	ENSMZEG00005008993	pcbp3	88	88.704	Maylandia_zebra
ENSTRUG00000006280	-	89	76.074	ENSMGAG00000006794	-	73	76.074	Meleagris_gallopavo
ENSTRUG00000006280	-	88	79.937	ENSMGAG00000001883	-	93	79.937	Meleagris_gallopavo
ENSTRUG00000006280	-	93	92.808	ENSMMOG00000000730	pcbp3	82	92.808	Mola_mola
ENSTRUG00000006280	-	99	92.308	ENSMMOG00000005216	-	99	92.308	Mola_mola
ENSTRUG00000006280	-	72	77.570	ENSMODG00000027884	-	93	77.570	Monodelphis_domestica
ENSTRUG00000006280	-	95	84.520	ENSMALG00000000691	pcbp3	94	84.520	Monopterus_albus
ENSTRUG00000006280	-	96	83.540	ENSMPUG00000001779	-	87	83.540	Mustela_putorius_furo
ENSTRUG00000006280	-	92	89.803	ENSNBRG00000016714	-	93	89.474	Neolamprologus_brichardi
ENSTRUG00000006280	-	99	82.583	ENSNBRG00000016409	-	96	82.583	Neolamprologus_brichardi
ENSTRUG00000006280	-	96	78.324	ENSOPRG00000003431	-	100	78.324	Ochotona_princeps
ENSTRUG00000006280	-	92	98.958	ENSONIG00000004611	-	95	98.958	Oreochromis_niloticus
ENSTRUG00000006280	-	88	83.750	ENSONIG00000012122	-	93	83.750	Oreochromis_niloticus
ENSTRUG00000006280	-	92	96.181	ENSOCUG00000002696	-	87	96.181	Oryctolagus_cuniculus
ENSTRUG00000006280	-	88	97.473	ENSORLG00000000059	pcbp3	95	97.473	Oryzias_latipes
ENSTRUG00000006280	-	92	99.306	ENSORLG00000022739	-	95	99.306	Oryzias_latipes
ENSTRUG00000006280	-	91	95.804	ENSORLG00020012671	pcbp3	95	95.804	Oryzias_latipes_hni
ENSTRUG00000006280	-	99	92.628	ENSORLG00020006124	-	95	98.958	Oryzias_latipes_hni
ENSTRUG00000006280	-	91	97.213	ENSORLG00015008051	-	93	97.213	Oryzias_latipes_hsok
ENSTRUG00000006280	-	91	95.804	ENSORLG00015000429	pcbp3	95	95.804	Oryzias_latipes_hsok
ENSTRUG00000006280	-	99	92.308	ENSOMEG00000020162	-	95	98.611	Oryzias_melastigma
ENSTRUG00000006280	-	91	95.804	ENSOMEG00000020811	pcbp3	98	95.804	Oryzias_melastigma
ENSTRUG00000006280	-	92	83.234	ENSOGAG00000008044	-	96	83.234	Otolemur_garnettii
ENSTRUG00000006280	-	99	91.987	ENSPKIG00000019329	pcbp3	99	91.987	Paramormyrops_kingsleyae
ENSTRUG00000006280	-	72	87.879	ENSPKIG00000020913	-	74	87.879	Paramormyrops_kingsleyae
ENSTRUG00000006280	-	92	82.295	ENSPSIG00000014970	-	96	82.951	Pelodiscus_sinensis
ENSTRUG00000006280	-	71	80.894	ENSPSIG00000008350	-	68	80.894	Pelodiscus_sinensis
ENSTRUG00000006280	-	88	89.632	ENSPMGG00000022383	pcbp3	91	89.632	Periophthalmus_magnuspinnatus
ENSTRUG00000006280	-	91	73.883	ENSPMAG00000004551	pcbp3	88	73.883	Petromyzon_marinus
ENSTRUG00000006280	-	85	88.272	ENSPMAG00000004637	-	93	88.272	Petromyzon_marinus
ENSTRUG00000006280	-	92	89.711	ENSPCIG00000028092	-	96	89.711	Phascolarctos_cinereus
ENSTRUG00000006280	-	99	89.506	ENSPLAG00000004074	-	92	89.506	Poecilia_latipinna
ENSTRUG00000006280	-	91	82.515	ENSPLAG00000011449	pcbp3	83	82.515	Poecilia_latipinna
ENSTRUG00000006280	-	91	86.774	ENSPMEG00000021239	pcbp3	85	89.667	Poecilia_mexicana
ENSTRUG00000006280	-	100	85.251	ENSPMEG00000006653	-	100	85.546	Poecilia_mexicana
ENSTRUG00000006280	-	99	92.652	ENSPREG00000020585	-	99	92.652	Poecilia_reticulata
ENSTRUG00000006280	-	96	90.000	ENSPREG00000015736	pcbp3	98	90.000	Poecilia_reticulata
ENSTRUG00000006280	-	99	92.628	ENSPNYG00000013205	-	99	92.628	Pundamilia_nyererei
ENSTRUG00000006280	-	88	97.112	ENSPNYG00000012326	pcbp3	85	97.112	Pundamilia_nyererei
ENSTRUG00000006280	-	95	88.963	ENSPNAG00000008541	-	97	88.963	Pygocentrus_nattereri
ENSTRUG00000006280	-	92	98.958	ENSPNAG00000015104	pcbp3	90	98.958	Pygocentrus_nattereri
ENSTRUG00000006280	-	92	96.875	ENSRNOG00000001245	Pcbp3	96	96.875	Rattus_norvegicus
ENSTRUG00000006280	-	92	88.737	ENSRBIG00000028177	-	81	88.737	Rhinopithecus_bieti
ENSTRUG00000006280	-	92	90.260	ENSSHAG00000007890	-	96	90.260	Sarcophilus_harrisii
ENSTRUG00000006280	-	89	89.369	ENSSFOG00015014706	pcbp3	91	89.369	Scleropages_formosus
ENSTRUG00000006280	-	89	98.561	ENSSFOG00015010205	pcbp3	90	98.561	Scleropages_formosus
ENSTRUG00000006280	-	97	80.386	ENSSFOG00015007118	-	95	80.386	Scleropages_formosus
ENSTRUG00000006280	-	95	96.633	ENSSMAG00000003135	-	95	98.958	Scophthalmus_maximus
ENSTRUG00000006280	-	96	91.333	ENSSMAG00000011929	pcbp3	96	91.333	Scophthalmus_maximus
ENSTRUG00000006280	-	96	87.013	ENSSDUG00000008502	-	94	87.013	Seriola_dumerili
ENSTRUG00000006280	-	96	84.000	ENSSDUG00000011608	pcbp3	98	84.000	Seriola_dumerili
ENSTRUG00000006280	-	89	99.281	ENSSLDG00000020161	-	91	99.281	Seriola_lalandi_dorsalis
ENSTRUG00000006280	-	96	84.000	ENSSLDG00000008518	pcbp3	98	84.000	Seriola_lalandi_dorsalis
ENSTRUG00000006280	-	85	81.100	ENSSPUG00000013214	-	92	81.100	Sphenodon_punctatus
ENSTRUG00000006280	-	89	95.222	ENSSPAG00000004190	-	100	95.222	Stegastes_partitus
ENSTRUG00000006280	-	96	72.171	ENSSPAG00000023341	-	94	72.171	Stegastes_partitus
ENSTRUG00000006280	-	92	88.889	ENSTGUG00000008158	-	96	88.889	Taeniopygia_guttata
ENSTRUG00000006280	-	88	90.236	ENSTGUG00000003316	-	88	90.236	Taeniopygia_guttata
ENSTRUG00000006280	-	92	83.082	ENSTTRG00000015075	-	96	83.082	Tursiops_truncatus
ENSTRUG00000006280	-	89	75.767	ENSXETG00000010491	pcbp2	72	75.767	Xenopus_tropicalis
ENSTRUG00000006280	-	92	88.636	ENSXETG00000011483	pcbp1	96	88.636	Xenopus_tropicalis
ENSTRUG00000006280	-	88	89.667	ENSXCOG00000020481	pcbp3	85	89.667	Xiphophorus_couchianus
ENSTRUG00000006280	-	89	99.281	ENSXMAG00000028711	-	91	99.281	Xiphophorus_maculatus
ENSTRUG00000006280	-	89	89.109	ENSXMAG00000008175	pcbp3	91	89.109	Xiphophorus_maculatus