EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSTRUG00000006420 (Gene tree)
Gene ID: 105418845
Gene Symbol: swt1
Alias: si:dkeyp-11g8.2|si:dkeyp-11g8.4|wu:fb81g09
Full Name: SWT1%2C RNA endoribonuclease homolog
Gene Type: protein_coding
Species: Takifugu_rubripes
Status: putative
Strand: Minus strand
Length: 13668 bases
Position: chrHE591824.1:141328-154995
Accession: 105418845
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTRUP00000015718	PIN_4	PF13638.6	9.7e-31	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTRUT00000015787	-	3291	XM_011619753	ENSTRUP00000015718	887 (aa)	XP_011618055	H2STI1

Gene Model

Click here to download ENSTRUG00000006420's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTRUG00000006420's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTRUG00000006420	swt1	61	34.555	ENSG00000116668	SWT1	60	34.912	Homo_sapiens
ENSTRUG00000006420	swt1	96	48.360	ENSAPOG00000014897	-	99	47.702	Acanthochromis_polyacanthus
ENSTRUG00000006420	swt1	67	33.974	ENSAMEG00000013585	SWT1	65	33.974	Ailuropoda_melanoleuca
ENSTRUG00000006420	swt1	96	49.574	ENSAOCG00000013932	swt1	99	49.180	Amphiprion_ocellaris
ENSTRUG00000006420	swt1	96	49.574	ENSAPEG00000009613	-	99	49.180	Amphiprion_percula
ENSTRUG00000006420	swt1	98	48.574	ENSATEG00000018946	swt1	99	48.501	Anabas_testudineus
ENSTRUG00000006420	swt1	61	36.991	ENSAPLG00000008607	SWT1	75	36.991	Anas_platyrhynchos
ENSTRUG00000006420	swt1	65	33.056	ENSACAG00000002276	SWT1	68	33.278	Anolis_carolinensis
ENSTRUG00000006420	swt1	64	33.890	ENSANAG00000027068	SWT1	63	34.060	Aotus_nancymaae
ENSTRUG00000006420	swt1	60	58.099	ENSACLG00000009742	swt1	69	59.292	Astatotilapia_calliptera
ENSTRUG00000006420	swt1	62	46.126	ENSAMXG00000010971	swt1	57	46.126	Astyanax_mexicanus
ENSTRUG00000006420	swt1	64	34.122	ENSCJAG00000005544	SWT1	63	34.122	Callithrix_jacchus
ENSTRUG00000006420	swt1	61	34.790	ENSCAFG00000013543	SWT1	60	34.854	Canis_familiaris
ENSTRUG00000006420	swt1	61	34.904	ENSCAFG00020015648	SWT1	64	34.790	Canis_lupus_dingo
ENSTRUG00000006420	swt1	70	33.737	ENSCHIG00000023511	SWT1	94	35.406	Capra_hircus
ENSTRUG00000006420	swt1	67	33.439	ENSTSYG00000010470	SWT1	64	33.439	Carlito_syrichta
ENSTRUG00000006420	swt1	57	35.055	ENSCPOG00000014251	SWT1	65	35.055	Cavia_porcellus
ENSTRUG00000006420	swt1	64	34.783	ENSCCAG00000033926	SWT1	63	34.783	Cebus_capucinus
ENSTRUG00000006420	swt1	61	34.155	ENSCATG00000042210	SWT1	93	34.155	Cercocebus_atys
ENSTRUG00000006420	swt1	62	34.122	ENSCLAG00000013959	SWT1	64	34.122	Chinchilla_lanigera
ENSTRUG00000006420	swt1	61	33.449	ENSCSAG00000012895	SWT1	60	34.386	Chlorocebus_sabaeus
ENSTRUG00000006420	swt1	64	35.342	ENSCPBG00000015691	SWT1	66	35.342	Chrysemys_picta_bellii
ENSTRUG00000006420	swt1	67	33.228	ENSCANG00000032207	SWT1	93	33.916	Colobus_angolensis_palliatus
ENSTRUG00000006420	swt1	61	35.417	ENSCGRG00001022955	Swt1	63	35.417	Cricetulus_griseus_chok1gshd
ENSTRUG00000006420	swt1	61	35.417	ENSCGRG00000010224	Swt1	61	35.417	Cricetulus_griseus_crigri
ENSTRUG00000006420	swt1	65	56.645	ENSCSEG00000017352	swt1	88	53.630	Cynoglossus_semilaevis
ENSTRUG00000006420	swt1	60	48.263	ENSDARG00000094010	swt1	56	48.263	Danio_rerio
ENSTRUG00000006420	swt1	53	35.366	ENSDNOG00000005254	SWT1	58	35.366	Dasypus_novemcinctus
ENSTRUG00000006420	swt1	62	35.254	ENSDORG00000010531	Swt1	67	35.254	Dipodomys_ordii
ENSTRUG00000006420	swt1	61	34.146	ENSEASG00005005530	SWT1	64	34.146	Equus_asinus_asinus
ENSTRUG00000006420	swt1	61	34.403	ENSECAG00000012085	SWT1	64	34.403	Equus_caballus
ENSTRUG00000006420	swt1	60	50.264	ENSELUG00000020565	swt1	55	50.532	Esox_lucius
ENSTRUG00000006420	swt1	61	34.276	ENSFCAG00000011286	SWT1	61	34.276	Felis_catus
ENSTRUG00000006420	swt1	61	34.130	ENSFALG00000003206	SWT1	62	34.300	Ficedula_albicollis
ENSTRUG00000006420	swt1	70	33.988	ENSFDAG00000007569	SWT1	70	33.988	Fukomys_damarensis
ENSTRUG00000006420	swt1	68	32.934	ENSGALG00000034230	SWT1	75	33.084	Gallus_gallus
ENSTRUG00000006420	swt1	93	44.114	ENSGAFG00000007803	-	99	42.990	Gambusia_affinis
ENSTRUG00000006420	swt1	61	34.938	ENSGAGG00000025050	SWT1	94	34.938	Gopherus_agassizii
ENSTRUG00000006420	swt1	55	34.674	ENSGGOG00000041167	-	91	34.674	Gorilla_gorilla
ENSTRUG00000006420	swt1	63	57.550	ENSHBUG00000006188	swt1	70	58.685	Haplochromis_burtoni
ENSTRUG00000006420	swt1	62	35.254	ENSHGLG00000006542	SWT1	66	35.254	Heterocephalus_glaber_female
ENSTRUG00000006420	swt1	62	35.424	ENSHGLG00100014408	SWT1	64	35.424	Heterocephalus_glaber_male
ENSTRUG00000006420	swt1	62	47.153	ENSIPUG00000009113	-	95	37.646	Ictalurus_punctatus
ENSTRUG00000006420	swt1	62	35.223	ENSSTOG00000010356	SWT1	63	35.223	Ictidomys_tridecemlineatus
ENSTRUG00000006420	swt1	63	35.067	ENSJJAG00000015927	Swt1	67	35.067	Jaculus_jaculus
ENSTRUG00000006420	swt1	99	43.514	ENSKMAG00000012533	swt1	99	43.514	Kryptolebias_marmoratus
ENSTRUG00000006420	swt1	97	46.008	ENSLBEG00000020663	-	99	45.825	Labrus_bergylta
ENSTRUG00000006420	swt1	69	35.535	ENSLACG00000009194	SWT1	90	35.535	Latimeria_chalumnae
ENSTRUG00000006420	swt1	58	42.458	ENSLOCG00000001749	swt1	97	42.458	Lepisosteus_oculatus
ENSTRUG00000006420	swt1	62	33.959	ENSLAFG00000004346	-	96	33.959	Loxodonta_africana
ENSTRUG00000006420	swt1	61	33.624	ENSMFAG00000031793	SWT1	94	33.624	Macaca_fascicularis
ENSTRUG00000006420	swt1	55	33.846	ENSMMUG00000013882	SWT1	87	33.846	Macaca_mulatta
ENSTRUG00000006420	swt1	61	33.979	ENSMNEG00000035502	SWT1	94	33.979	Macaca_nemestrina
ENSTRUG00000006420	swt1	61	34.276	ENSMLEG00000038692	SWT1	93	33.803	Mandrillus_leucophaeus
ENSTRUG00000006420	swt1	63	58.054	ENSMZEG00005018489	swt1	70	59.191	Maylandia_zebra
ENSTRUG00000006420	swt1	61	34.655	ENSMGAG00000000973	SWT1	95	34.655	Meleagris_gallopavo
ENSTRUG00000006420	swt1	61	31.532	ENSMAUG00000007996	Swt1	58	31.532	Mesocricetus_auratus
ENSTRUG00000006420	swt1	63	34.753	ENSMICG00000014975	SWT1	63	34.753	Microcebus_murinus
ENSTRUG00000006420	swt1	62	36.207	ENSMOCG00000009776	Swt1	62	36.207	Microtus_ochrogaster
ENSTRUG00000006420	swt1	63	33.838	ENSMODG00000007472	SWT1	62	33.838	Monodelphis_domestica
ENSTRUG00000006420	swt1	98	48.017	ENSMALG00000019308	swt1	99	48.472	Monopterus_albus
ENSTRUG00000006420	swt1	66	35.088	MGP_CAROLIEiJ_G0014692	Swt1	70	42.045	Mus_caroli
ENSTRUG00000006420	swt1	70	33.876	ENSMUSG00000052748	Swt1	76	40.000	Mus_musculus
ENSTRUG00000006420	swt1	70	34.269	MGP_PahariEiJ_G0027928	Swt1	70	42.045	Mus_pahari
ENSTRUG00000006420	swt1	70	34.024	MGP_SPRETEiJ_G0015499	Swt1	70	42.614	Mus_spretus
ENSTRUG00000006420	swt1	61	35.387	ENSMPUG00000011913	SWT1	61	35.387	Mustela_putorius_furo
ENSTRUG00000006420	swt1	67	33.710	ENSMLUG00000001142	SWT1	60	34.215	Myotis_lucifugus
ENSTRUG00000006420	swt1	61	35.346	ENSNGAG00000021080	Swt1	64	34.036	Nannospalax_galili
ENSTRUG00000006420	swt1	61	34.798	ENSNLEG00000018031	SWT1	60	34.798	Nomascus_leucogenys
ENSTRUG00000006420	swt1	63	56.444	ENSONIG00000009994	swt1	97	57.407	Oreochromis_niloticus
ENSTRUG00000006420	swt1	64	32.947	ENSOANG00000001013	-	74	32.947	Ornithorhynchus_anatinus
ENSTRUG00000006420	swt1	61	35.727	ENSOCUG00000004901	SWT1	62	35.727	Oryctolagus_cuniculus
ENSTRUG00000006420	swt1	96	42.560	ENSORLG00000009682	swt1	99	42.427	Oryzias_latipes
ENSTRUG00000006420	swt1	99	42.798	ENSORLG00020011654	swt1	97	42.798	Oryzias_latipes_hni
ENSTRUG00000006420	swt1	96	43.127	ENSORLG00015007734	swt1	99	42.915	Oryzias_latipes_hsok
ENSTRUG00000006420	swt1	61	57.651	ENSOMEG00000006607	swt1	57	57.651	Oryzias_melastigma
ENSTRUG00000006420	swt1	65	33.773	ENSOGAG00000016195	SWT1	65	33.773	Otolemur_garnettii
ENSTRUG00000006420	swt1	70	33.737	ENSOARG00000004156	SWT1	67	33.737	Ovis_aries
ENSTRUG00000006420	swt1	61	34.441	ENSPPAG00000021400	SWT1	60	34.912	Pan_paniscus
ENSTRUG00000006420	swt1	61	34.629	ENSPPRG00000023754	SWT1	61	34.629	Panthera_pardus
ENSTRUG00000006420	swt1	61	34.629	ENSPTIG00000021889	SWT1	61	34.629	Panthera_tigris_altaica
ENSTRUG00000006420	swt1	61	34.615	ENSPTRG00000001777	SWT1	60	34.615	Pan_troglodytes
ENSTRUG00000006420	swt1	61	34.331	ENSPANG00000005099	SWT1	93	34.331	Papio_anubis
ENSTRUG00000006420	swt1	61	48.387	ENSPKIG00000005979	swt1	58	48.387	Paramormyrops_kingsleyae
ENSTRUG00000006420	swt1	61	35.079	ENSPSIG00000008961	SWT1	61	35.079	Pelodiscus_sinensis
ENSTRUG00000006420	swt1	62	35.424	ENSPEMG00000008208	Swt1	62	35.424	Peromyscus_maniculatus_bairdii
ENSTRUG00000006420	swt1	61	33.390	ENSPCIG00000002443	SWT1	61	33.390	Phascolarctos_cinereus
ENSTRUG00000006420	swt1	99	42.887	ENSPFOG00000010988	-	99	42.887	Poecilia_formosa
ENSTRUG00000006420	swt1	99	42.990	ENSPLAG00000022908	-	99	42.990	Poecilia_latipinna
ENSTRUG00000006420	swt1	99	42.695	ENSPMEG00000006943	-	99	42.695	Poecilia_mexicana
ENSTRUG00000006420	swt1	62	39.008	ENSPREG00000014723	-	84	39.008	Poecilia_reticulata
ENSTRUG00000006420	swt1	61	34.441	ENSPPYG00000000415	SWT1	60	34.912	Pongo_abelii
ENSTRUG00000006420	swt1	59	37.799	ENSPCAG00000008337	SWT1	57	37.799	Procavia_capensis
ENSTRUG00000006420	swt1	61	32.574	ENSPVAG00000005968	SWT1	61	32.574	Pteropus_vampyrus
ENSTRUG00000006420	swt1	63	57.718	ENSPNYG00000012934	swt1	70	58.853	Pundamilia_nyererei
ENSTRUG00000006420	swt1	61	48.294	ENSPNAG00000017795	swt1	98	36.936	Pygocentrus_nattereri
ENSTRUG00000006420	swt1	70	34.763	ENSRNOG00000032258	Swt1	71	34.763	Rattus_norvegicus
ENSTRUG00000006420	swt1	61	32.807	ENSRBIG00000040630	SWT1	93	32.807	Rhinopithecus_bieti
ENSTRUG00000006420	swt1	64	34.175	ENSSBOG00000028825	SWT1	63	34.175	Saimiri_boliviensis_boliviensis
ENSTRUG00000006420	swt1	61	34.790	ENSSHAG00000009241	SWT1	60	34.790	Sarcophilus_harrisii
ENSTRUG00000006420	swt1	62	48.932	ENSSFOG00015004895	swt1	57	48.932	Scleropages_formosus
ENSTRUG00000006420	swt1	64	58.418	ENSSMAG00000020761	-	55	54.905	Scophthalmus_maximus
ENSTRUG00000006420	swt1	98	49.154	ENSSDUG00000012345	swt1	99	49.326	Seriola_dumerili
ENSTRUG00000006420	swt1	98	49.156	ENSSLDG00000003821	swt1	99	49.328	Seriola_lalandi_dorsalis
ENSTRUG00000006420	swt1	63	37.308	ENSSPUG00000003899	SWT1	63	37.308	Sphenodon_punctatus
ENSTRUG00000006420	swt1	96	47.649	ENSSPAG00000001030	swt1	99	48.167	Stegastes_partitus
ENSTRUG00000006420	swt1	63	34.833	ENSSSCG00000015569	SWT1	64	35.333	Sus_scrofa
ENSTRUG00000006420	swt1	61	33.925	ENSTGUG00000003718	-	99	33.925	Taeniopygia_guttata
ENSTRUG00000006420	swt1	70	32.929	ENSTTRG00000005914	SWT1	68	32.929	Tursiops_truncatus
ENSTRUG00000006420	swt1	67	34.560	ENSUAMG00000020937	SWT1	70	34.560	Ursus_americanus
ENSTRUG00000006420	swt1	67	34.560	ENSUMAG00000021918	SWT1	65	34.609	Ursus_maritimus
ENSTRUG00000006420	swt1	52	40.580	ENSVPAG00000011855	SWT1	52	40.580	Vicugna_pacos
ENSTRUG00000006420	swt1	61	34.790	ENSVVUG00000009182	SWT1	63	34.790	Vulpes_vulpes
ENSTRUG00000006420	swt1	99	43.151	ENSXMAG00000023472	-	99	43.151	Xiphophorus_maculatus