EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTRUG00000006698 (Gene tree)
Gene ID: 101077404
Gene Symbol: -
Alias: -
Full Name: non-canonical poly(A) RNA polymerase PAPD7-like
Gene Type: protein_coding
Species: Takifugu_rubripes
Status: putative
Strand: Minus strand
Length: 7550 bases
Position: chr7:8737966-8745515
Accession: 101077404
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTRUP00000016462	PAP_assoc	PF03828.19	3.6e-17	1	1
ENSTRUP00000048223	PAP_assoc	PF03828.19	3.6e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTRUT00000016534	-	4539	XM_011605466	ENSTRUP00000016462	763 (aa)	XP_011603768	H2SVM4
ENSTRUT00000053535	-	4619	XM_011605467	ENSTRUP00000048223	763 (aa)	XP_011603769	-

Gene Model

Click here to download ENSTRUG00000006698's gene model file

Pathways

Pathway ID	Pathway Name	Source
tru03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSTRUG00000006698's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTRUG00000006698	-	51	74.194	ENSTRUG00000006962	tent4b	67	74.194
ENSTRUG00000006698	-	89	49.603	ENSTRUG00000012098	tent4a	93	64.138

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTRUG00000006698	-	52	83.871	ENSG00000112941	TENT4A	100	74.074	Homo_sapiens
ENSTRUG00000006698	-	98	79.521	ENSAPOG00000018106	-	92	79.521	Acanthochromis_polyacanthus
ENSTRUG00000006698	-	74	61.850	ENSAPOG00000002178	tent4a	70	62.279	Acanthochromis_polyacanthus
ENSTRUG00000006698	-	63	58.691	ENSAMEG00000002806	TENT4A	89	58.571	Ailuropoda_melanoleuca
ENSTRUG00000006698	-	56	60.465	ENSACIG00000013326	tent4a	73	63.736	Amphilophus_citrinellus
ENSTRUG00000006698	-	79	68.212	ENSACIG00000014234	-	91	67.219	Amphilophus_citrinellus
ENSTRUG00000006698	-	98	78.600	ENSAOCG00000013501	-	92	79.524	Amphiprion_ocellaris
ENSTRUG00000006698	-	67	66.960	ENSAOCG00000019251	tent4a	73	58.289	Amphiprion_ocellaris
ENSTRUG00000006698	-	67	66.740	ENSAPEG00000002703	tent4a	83	71.788	Amphiprion_percula
ENSTRUG00000006698	-	98	79.288	ENSAPEG00000015522	-	92	80.079	Amphiprion_percula
ENSTRUG00000006698	-	98	81.709	ENSATEG00000024197	-	92	81.442	Anabas_testudineus
ENSTRUG00000006698	-	82	53.779	ENSATEG00000006898	tent4a	82	72.346	Anabas_testudineus
ENSTRUG00000006698	-	52	83.871	ENSANAG00000037806	TENT4A	56	72.162	Aotus_nancymaae
ENSTRUG00000006698	-	98	70.719	ENSACLG00000016812	-	92	71.765	Astatotilapia_calliptera
ENSTRUG00000006698	-	55	65.394	ENSACLG00000014408	tent4a	76	65.459	Astatotilapia_calliptera
ENSTRUG00000006698	-	62	74.286	ENSAMXG00000017691	tent4a	61	67.442	Astyanax_mexicanus
ENSTRUG00000006698	-	77	54.619	ENSAMXG00000039964	TENT4A	87	51.763	Astyanax_mexicanus
ENSTRUG00000006698	-	52	83.871	ENSCJAG00000008742	TENT4A	52	72.162	Callithrix_jacchus
ENSTRUG00000006698	-	63	58.149	ENSCAFG00000010319	TENT4A	89	58.032	Canis_familiaris
ENSTRUG00000006698	-	63	58.149	ENSCAFG00020022835	TENT4A	89	58.032	Canis_lupus_dingo
ENSTRUG00000006698	-	65	56.311	ENSCHIG00000017328	TENT4A	91	56.311	Capra_hircus
ENSTRUG00000006698	-	52	83.871	ENSCCAG00000006730	TENT4A	56	78.033	Cebus_capucinus
ENSTRUG00000006698	-	76	81.250	ENSCPBG00000006514	TENT4A	77	81.250	Chrysemys_picta_bellii
ENSTRUG00000006698	-	98	83.377	ENSCSEG00000003887	-	92	83.905	Cynoglossus_semilaevis
ENSTRUG00000006698	-	53	89.423	ENSCVAG00000008463	-	86	89.423	Cyprinodon_variegatus
ENSTRUG00000006698	-	89	49.222	ENSCVAG00000021741	tent4a	75	58.661	Cyprinodon_variegatus
ENSTRUG00000006698	-	65	63.776	ENSDARG00000062114	tent4a	82	72.905	Danio_rerio
ENSTRUG00000006698	-	63	58.551	ENSEASG00005018583	TENT4A	89	58.434	Equus_asinus_asinus
ENSTRUG00000006698	-	75	83.871	ENSECAG00000010134	TENT4A	74	68.293	Equus_caballus
ENSTRUG00000006698	-	82	54.265	ENSELUG00000024141	tent4a	72	72.642	Esox_lucius
ENSTRUG00000006698	-	75	83.871	ENSFCAG00000003474	TENT4A	74	68.293	Felis_catus
ENSTRUG00000006698	-	89	49.337	ENSFHEG00000017843	tent4a	69	59.763	Fundulus_heteroclitus
ENSTRUG00000006698	-	98	72.318	ENSFHEG00000006086	-	92	72.715	Fundulus_heteroclitus
ENSTRUG00000006698	-	69	85.714	ENSGALG00000013061	PAPD7	72	80.130	Gallus_gallus
ENSTRUG00000006698	-	98	74.702	ENSGAFG00000000179	-	92	76.026	Gambusia_affinis
ENSTRUG00000006698	-	61	59.197	ENSGACG00000008953	tent4a	88	59.619	Gasterosteus_aculeatus
ENSTRUG00000006698	-	55	65.155	ENSHBUG00000022127	tent4a	91	53.712	Haplochromis_burtoni
ENSTRUG00000006698	-	98	71.111	ENSHBUG00000001038	-	92	72.157	Haplochromis_burtoni
ENSTRUG00000006698	-	68	83.871	ENSHGLG00000005593	TENT4A	67	83.871	Heterocephalus_glaber_female
ENSTRUG00000006698	-	56	61.927	ENSHGLG00100016621	TENT4A	56	77.049	Heterocephalus_glaber_male
ENSTRUG00000006698	-	94	50.644	ENSHCOG00000018008	tent4a	67	58.727	Hippocampus_comes
ENSTRUG00000006698	-	64	64.764	ENSIPUG00000014941	tent4a	66	64.930	Ictalurus_punctatus
ENSTRUG00000006698	-	58	83.333	ENSIPUG00000000878	-	60	83.333	Ictalurus_punctatus
ENSTRUG00000006698	-	63	57.959	ENSJJAG00000007205	Tent4a	92	56.947	Jaculus_jaculus
ENSTRUG00000006698	-	98	74.286	ENSKMAG00000019925	-	93	75.714	Kryptolebias_marmoratus
ENSTRUG00000006698	-	79	52.719	ENSKMAG00000000725	tent4a	84	69.832	Kryptolebias_marmoratus
ENSTRUG00000006698	-	98	83.551	ENSLBEG00000021596	-	92	84.204	Labrus_bergylta
ENSTRUG00000006698	-	91	55.245	ENSLOCG00000008727	tent4a	92	54.244	Lepisosteus_oculatus
ENSTRUG00000006698	-	65	55.010	ENSLAFG00000004787	TENT4A	92	55.577	Loxodonta_africana
ENSTRUG00000006698	-	52	83.871	ENSMMUG00000013189	TENT4A	51	83.871	Macaca_mulatta
ENSTRUG00000006698	-	52	83.871	ENSMNEG00000029090	TENT4A	52	72.162	Macaca_nemestrina
ENSTRUG00000006698	-	98	77.836	ENSMAMG00000024030	-	92	78.100	Mastacembelus_armatus
ENSTRUG00000006698	-	98	70.458	ENSMZEG00005001805	-	92	71.503	Maylandia_zebra
ENSTRUG00000006698	-	63	59.016	ENSMOCG00000008477	Tent4a	89	59.470	Microtus_ochrogaster
ENSTRUG00000006698	-	70	60.262	ENSMMOG00000021181	tent4a	78	66.427	Mola_mola
ENSTRUG00000006698	-	52	88.328	ENSMMOG00000008539	-	84	88.328	Mola_mola
ENSTRUG00000006698	-	75	79.412	ENSMODG00000002052	TENT4A	66	79.412	Monodelphis_domestica
ENSTRUG00000006698	-	86	79.192	ENSMALG00000018694	-	98	79.790	Monopterus_albus
ENSTRUG00000006698	-	65	67.981	ENSMALG00000002692	tent4a	63	68.109	Monopterus_albus
ENSTRUG00000006698	-	63	58.621	ENSMPUG00000007530	TENT4A	92	56.395	Mustela_putorius_furo
ENSTRUG00000006698	-	63	58.607	ENSNGAG00000006352	Tent4a	92	57.367	Nannospalax_galili
ENSTRUG00000006698	-	51	85.806	ENSNBRG00000009218	TENT4A	80	85.806	Neolamprologus_brichardi
ENSTRUG00000006698	-	62	44.172	ENSMEUG00000004007	TENT4A	99	43.648	Notamacropus_eugenii
ENSTRUG00000006698	-	63	59.959	ENSOANG00000011579	-	89	59.959	Ornithorhynchus_anatinus
ENSTRUG00000006698	-	98	69.067	ENSORLG00000027691	-	92	69.067	Oryzias_latipes
ENSTRUG00000006698	-	89	50.280	ENSORLG00000025175	tent4a	63	60.843	Oryzias_latipes
ENSTRUG00000006698	-	98	69.404	ENSORLG00020022661	-	92	69.404	Oryzias_latipes_hni
ENSTRUG00000006698	-	89	50.838	ENSORLG00020019731	tent4a	63	60.843	Oryzias_latipes_hni
ENSTRUG00000006698	-	98	67.436	ENSORLG00015006327	-	93	67.436	Oryzias_latipes_hsok
ENSTRUG00000006698	-	89	51.904	ENSOMEG00000013540	tent4a	78	52.958	Oryzias_melastigma
ENSTRUG00000006698	-	52	83.974	ENSOMEG00000014052	-	85	83.974	Oryzias_melastigma
ENSTRUG00000006698	-	63	57.460	ENSOARG00000014904	TENT4A	91	56.311	Ovis_aries
ENSTRUG00000006698	-	63	57.863	ENSPPRG00000002409	TENT4A	91	56.286	Panthera_pardus
ENSTRUG00000006698	-	95	51.515	ENSPKIG00000020499	-	68	60.589	Paramormyrops_kingsleyae
ENSTRUG00000006698	-	68	74.074	ENSPKIG00000024130	tent4a	67	74.074	Paramormyrops_kingsleyae
ENSTRUG00000006698	-	66	56.381	ENSPSIG00000015964	TENT4A	94	56.381	Pelodiscus_sinensis
ENSTRUG00000006698	-	57	67.198	ENSPMGG00000004132	tent4a	72	67.123	Periophthalmus_magnuspinnatus
ENSTRUG00000006698	-	76	78.415	ENSPMGG00000007999	TENT4A	86	90.064	Periophthalmus_magnuspinnatus
ENSTRUG00000006698	-	75	79.412	ENSPCIG00000017056	TENT4A	70	79.412	Phascolarctos_cinereus
ENSTRUG00000006698	-	98	74.240	ENSPFOG00000016762	-	92	75.561	Poecilia_formosa
ENSTRUG00000006698	-	90	49.266	ENSPFOG00000003961	tent4a	77	59.180	Poecilia_formosa
ENSTRUG00000006698	-	76	80.651	ENSPLAG00000004468	TENT4A	90	93.525	Poecilia_latipinna
ENSTRUG00000006698	-	91	48.748	ENSPMEG00000006428	tent4a	78	51.150	Poecilia_mexicana
ENSTRUG00000006698	-	98	72.739	ENSPMEG00000009954	-	91	74.069	Poecilia_mexicana
ENSTRUG00000006698	-	58	74.359	ENSPREG00000017547	tent4a	75	65.550	Poecilia_reticulata
ENSTRUG00000006698	-	98	66.622	ENSPREG00000011257	TENT4A	91	75.084	Poecilia_reticulata
ENSTRUG00000006698	-	63	57.143	ENSPVAG00000000511	TENT4A	91	55.534	Pteropus_vampyrus
ENSTRUG00000006698	-	51	81.613	ENSPNYG00000008164	TENT4A	82	81.613	Pundamilia_nyererei
ENSTRUG00000006698	-	55	65.871	ENSPNYG00000010769	tent4a	91	53.712	Pundamilia_nyererei
ENSTRUG00000006698	-	77	55.882	ENSPNAG00000011603	TENT4A	68	80.000	Pygocentrus_nattereri
ENSTRUG00000006698	-	63	59.959	ENSSHAG00000012100	TENT4A	89	59.959	Sarcophilus_harrisii
ENSTRUG00000006698	-	59	62.664	ENSSFOG00015003516	-	90	61.777	Scleropages_formosus
ENSTRUG00000006698	-	55	70.476	ENSSFOG00015001756	tent4a	86	70.673	Scleropages_formosus
ENSTRUG00000006698	-	52	95.192	ENSSMAG00000003989	-	84	95.192	Scophthalmus_maximus
ENSTRUG00000006698	-	56	66.432	ENSSMAG00000020671	tent4a	89	58.088	Scophthalmus_maximus
ENSTRUG00000006698	-	82	53.546	ENSSDUG00000002157	tent4a	60	68.326	Seriola_dumerili
ENSTRUG00000006698	-	98	86.400	ENSSDUG00000014825	-	92	86.800	Seriola_dumerili
ENSTRUG00000006698	-	56	67.126	ENSSLDG00000004371	tent4a	76	67.849	Seriola_lalandi_dorsalis
ENSTRUG00000006698	-	98	86.533	ENSSLDG00000019746	-	92	86.933	Seriola_lalandi_dorsalis
ENSTRUG00000006698	-	98	80.397	ENSSPAG00000017401	-	92	81.325	Stegastes_partitus
ENSTRUG00000006698	-	60	64.871	ENSSPAG00000003618	tent4a	75	67.299	Stegastes_partitus
ENSTRUG00000006698	-	69	83.871	ENSSSCG00000017102	TENT4A	74	68.293	Sus_scrofa
ENSTRUG00000006698	-	55	65.707	ENSTGUG00000007771	TENT4A	77	65.707	Taeniopygia_guttata
ENSTRUG00000006698	-	64	59.200	ENSUAMG00000024711	TENT4A	84	59.082	Ursus_americanus
ENSTRUG00000006698	-	63	58.691	ENSUMAG00000021088	TENT4A	89	58.571	Ursus_maritimus
ENSTRUG00000006698	-	63	58.149	ENSVVUG00000017702	TENT4A	89	58.032	Vulpes_vulpes
ENSTRUG00000006698	-	56	64.858	ENSXCOG00000002570	tent4a	75	65.459	Xiphophorus_couchianus
ENSTRUG00000006698	-	91	48.667	ENSXMAG00000013580	tent4a	84	68.715	Xiphophorus_maculatus
ENSTRUG00000006698	-	52	86.901	ENSXMAG00000026228	TENT4A	84	86.901	Xiphophorus_maculatus