EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSTRUG00000006856 (Gene tree)
Gene ID: 101067255
Gene Symbol: srpra
Alias: id:ibd1064|srpr|wu:fd12f02
Full Name: SRP receptor subunit alpha
Gene Type: protein_coding
Species: Takifugu_rubripes
Status: putative
Strand: Minus strand
Length: 5628 bases
Position: chr11:863171-868798
Accession: 101067255
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTRUP00000016827	SRP54	PF00448.22	7.4e-48	1	1
ENSTRUP00000016828	SRP54	PF00448.22	7.5e-48	1	1
ENSTRUP00000016827	SRP54_N	PF02881.19	1.7e-09	1	1
ENSTRUP00000016828	SRP54_N	PF02881.19	2e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTRUT00000016901	-	1836	-	ENSTRUP00000016828	611 (aa)	-	H2SWP0
ENSTRUT00000016900	-	2604	XM_011608236	ENSTRUP00000016827	643 (aa)	XP_011606538	H2SWN9

Gene Model

Click here to download ENSTRUG00000006856's gene model file

Pathways

Pathway ID	Pathway Name	Source
tru03060	Protein export	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSTRUG00000006856's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTRUG00000006856	srpra	100	67.431	ENSG00000182934	SRPRA	100	66.719	Homo_sapiens
ENSTRUG00000006856	srpra	100	87.077	ENSAPOG00000017588	srpra	100	87.692	Acanthochromis_polyacanthus
ENSTRUG00000006856	srpra	100	66.971	ENSAMEG00000000117	SRPRA	100	66.047	Ailuropoda_melanoleuca
ENSTRUG00000006856	srpra	100	82.689	ENSACIG00000021588	srpra	100	82.535	Amphilophus_citrinellus
ENSTRUG00000006856	srpra	100	86.923	ENSAOCG00000018884	srpra	100	87.538	Amphiprion_ocellaris
ENSTRUG00000006856	srpra	100	86.923	ENSAPEG00000022286	srpra	100	83.961	Amphiprion_percula
ENSTRUG00000006856	srpra	100	82.642	ENSATEG00000023578	srpra	95	93.921	Anabas_testudineus
ENSTRUG00000006856	srpra	94	71.757	ENSAPLG00000016079	SRPRA	99	70.636	Anas_platyrhynchos
ENSTRUG00000006856	srpra	100	71.166	ENSACAG00000000108	SRPRA	100	71.626	Anolis_carolinensis
ENSTRUG00000006856	srpra	100	67.125	ENSANAG00000020346	SRPRA	100	66.096	Aotus_nancymaae
ENSTRUG00000006856	srpra	100	84.154	ENSACLG00000000518	srpra	100	84.308	Astatotilapia_calliptera
ENSTRUG00000006856	srpra	100	72.473	ENSAMXG00000009975	srpra	100	71.073	Astyanax_mexicanus
ENSTRUG00000006856	srpra	100	66.869	ENSBTAG00000014105	SRPRA	100	67.391	Bos_taurus
ENSTRUG00000006856	srpra	99	48.694	WBGene00009521	F38A1.8	99	48.080	Caenorhabditis_elegans
ENSTRUG00000006856	srpra	100	67.278	ENSCJAG00000008752	SRPRA	100	66.354	Callithrix_jacchus
ENSTRUG00000006856	srpra	100	65.145	ENSCAFG00000010474	SRPRA	100	63.927	Canis_familiaris
ENSTRUG00000006856	srpra	100	66.819	ENSCAFG00020010608	SRPRA	100	65.601	Canis_lupus_dingo
ENSTRUG00000006856	srpra	100	67.781	ENSCHIG00000012423	SRPRA	100	67.081	Capra_hircus
ENSTRUG00000006856	srpra	80	84.756	ENSTSYG00000005187	SRPRA	88	85.714	Carlito_syrichta
ENSTRUG00000006856	srpra	95	66.948	ENSCAPG00000007098	SRPRA	91	87.970	Cavia_aperea
ENSTRUG00000006856	srpra	100	67.584	ENSCPOG00000014976	SRPRA	91	87.970	Cavia_porcellus
ENSTRUG00000006856	srpra	100	66.407	ENSCCAG00000025602	SRPRA	100	66.096	Cebus_capucinus
ENSTRUG00000006856	srpra	100	67.584	ENSCATG00000039354	SRPRA	100	66.563	Cercocebus_atys
ENSTRUG00000006856	srpra	100	67.431	ENSCLAG00000016839	SRPRA	100	66.407	Chinchilla_lanigera
ENSTRUG00000006856	srpra	100	67.431	ENSCSAG00000002271	SRPRA	100	66.252	Chlorocebus_sabaeus
ENSTRUG00000006856	srpra	54	87.245	ENSCHOG00000010015	-	73	87.245	Choloepus_hoffmanni
ENSTRUG00000006856	srpra	100	70.750	ENSCPBG00000011128	SRPRA	100	70.642	Chrysemys_picta_bellii
ENSTRUG00000006856	srpra	99	58.000	ENSCING00000008954	-	100	58.552	Ciona_intestinalis
ENSTRUG00000006856	srpra	99	59.084	ENSCSAVG00000005602	-	100	58.110	Ciona_savignyi
ENSTRUG00000006856	srpra	100	67.584	ENSCANG00000032337	SRPRA	100	66.407	Colobus_angolensis_palliatus
ENSTRUG00000006856	srpra	100	67.584	ENSCGRG00001017670	Srpr	100	66.771	Cricetulus_griseus_chok1gshd
ENSTRUG00000006856	srpra	100	67.584	ENSCGRG00000009892	Srpr	90	88.148	Cricetulus_griseus_crigri
ENSTRUG00000006856	srpra	100	82.488	ENSCSEG00000002374	srpra	100	82.488	Cynoglossus_semilaevis
ENSTRUG00000006856	srpra	100	82.488	ENSCVAG00000019881	srpra	100	83.103	Cyprinodon_variegatus
ENSTRUG00000006856	srpra	100	77.029	ENSDARG00000061124	srpra	100	76.876	Danio_rerio
ENSTRUG00000006856	srpra	100	66.923	ENSDNOG00000010821	SRPRA	100	64.769	Dasypus_novemcinctus
ENSTRUG00000006856	srpra	100	68.043	ENSDORG00000016719	Srpr	100	66.719	Dipodomys_ordii
ENSTRUG00000006856	srpra	99	52.006	FBgn0010391	Gtp-bp	100	52.080	Drosophila_melanogaster
ENSTRUG00000006856	srpra	100	66.822	ENSETEG00000013956	SRPRA	100	66.199	Echinops_telfairi
ENSTRUG00000006856	srpra	63	73.969	ENSEBUG00000002602	srpra	92	72.772	Eptatretus_burgeri
ENSTRUG00000006856	srpra	100	68.252	ENSEASG00005022980	SRPRA	100	65.753	Equus_asinus_asinus
ENSTRUG00000006856	srpra	100	68.252	ENSECAG00000014692	SRPRA	100	65.753	Equus_caballus
ENSTRUG00000006856	srpra	100	62.986	ENSEEUG00000007920	SRPRA	100	61.275	Erinaceus_europaeus
ENSTRUG00000006856	srpra	100	80.828	ENSELUG00000017643	srpra	100	81.748	Esox_lucius
ENSTRUG00000006856	srpra	80	61.509	ENSFCAG00000030894	-	99	58.767	Felis_catus
ENSTRUG00000006856	srpra	100	67.391	ENSFCAG00000011274	-	100	65.224	Felis_catus
ENSTRUG00000006856	srpra	99	68.992	ENSFALG00000005048	SRPRA	99	67.907	Ficedula_albicollis
ENSTRUG00000006856	srpra	100	67.278	ENSFDAG00000016229	SRPRA	92	83.217	Fukomys_damarensis
ENSTRUG00000006856	srpra	100	83.717	ENSFHEG00000016959	srpra	100	84.485	Fundulus_heteroclitus
ENSTRUG00000006856	srpra	100	80.556	ENSGMOG00000013244	srpra	100	80.556	Gadus_morhua
ENSTRUG00000006856	srpra	100	71.692	ENSGALG00000030759	SRPRA	100	70.923	Gallus_gallus
ENSTRUG00000006856	srpra	100	84.259	ENSGAFG00000000453	srpra	100	84.639	Gambusia_affinis
ENSTRUG00000006856	srpra	100	81.567	ENSGACG00000006550	srpra	100	81.567	Gasterosteus_aculeatus
ENSTRUG00000006856	srpra	100	70.904	ENSGAGG00000021157	SRPRA	100	70.795	Gopherus_agassizii
ENSTRUG00000006856	srpra	100	67.431	ENSGGOG00000012962	SRPRA	100	66.874	Gorilla_gorilla
ENSTRUG00000006856	srpra	100	84.000	ENSHBUG00000000119	srpra	100	84.154	Haplochromis_burtoni
ENSTRUG00000006856	srpra	100	67.584	ENSHGLG00000001597	SRPR	94	88.636	Heterocephalus_glaber_female
ENSTRUG00000006856	srpra	100	67.584	ENSHGLG00100006449	SRPR	94	88.636	Heterocephalus_glaber_male
ENSTRUG00000006856	srpra	100	82.669	ENSHCOG00000010749	srpra	100	82.975	Hippocampus_comes
ENSTRUG00000006856	srpra	94	73.039	ENSIPUG00000000867	srpra	99	72.712	Ictalurus_punctatus
ENSTRUG00000006856	srpra	100	67.737	ENSSTOG00000009897	SRPRA	100	66.252	Ictidomys_tridecemlineatus
ENSTRUG00000006856	srpra	100	66.971	ENSJJAG00000020272	Srpr	100	66.511	Jaculus_jaculus
ENSTRUG00000006856	srpra	100	82.669	ENSKMAG00000002280	srpra	100	83.436	Kryptolebias_marmoratus
ENSTRUG00000006856	srpra	93	95.873	ENSLBEG00000009608	srpra	100	85.407	Labrus_bergylta
ENSTRUG00000006856	srpra	100	68.589	ENSLACG00000017781	SRPRA	100	68.855	Latimeria_chalumnae
ENSTRUG00000006856	srpra	94	91.562	ENSLOCG00000002733	srpra	100	74.085	Lepisosteus_oculatus
ENSTRUG00000006856	srpra	100	66.615	ENSLAFG00000010252	SRPRA	100	66.459	Loxodonta_africana
ENSTRUG00000006856	srpra	100	67.584	ENSMFAG00000032606	SRPRA	100	66.407	Macaca_fascicularis
ENSTRUG00000006856	srpra	100	67.584	ENSMMUG00000007938	SRPRA	100	66.407	Macaca_mulatta
ENSTRUG00000006856	srpra	100	67.584	ENSMNEG00000030709	SRPRA	100	66.719	Macaca_nemestrina
ENSTRUG00000006856	srpra	100	67.584	ENSMLEG00000043404	SRPRA	100	66.563	Mandrillus_leucophaeus
ENSTRUG00000006856	srpra	100	84.284	ENSMAMG00000000473	srpra	100	82.743	Mastacembelus_armatus
ENSTRUG00000006856	srpra	100	84.154	ENSMZEG00005013432	srpra	100	84.308	Maylandia_zebra
ENSTRUG00000006856	srpra	94	71.217	ENSMGAG00000000732	SRPRA	100	70.230	Meleagris_gallopavo
ENSTRUG00000006856	srpra	100	67.123	ENSMAUG00000015648	Srpr	100	66.771	Mesocricetus_auratus
ENSTRUG00000006856	srpra	100	67.239	ENSMICG00000015981	SRPRA	100	66.615	Microcebus_murinus
ENSTRUG00000006856	srpra	100	67.278	ENSMOCG00000008311	Srpr	100	66.459	Microtus_ochrogaster
ENSTRUG00000006856	srpra	100	81.452	ENSMMOG00000005019	srpra	100	81.452	Mola_mola
ENSTRUG00000006856	srpra	100	68.000	ENSMODG00000004576	-	100	66.509	Monodelphis_domestica
ENSTRUG00000006856	srpra	100	84.769	ENSMALG00000011343	srpra	100	85.692	Monopterus_albus
ENSTRUG00000006856	srpra	100	67.890	MGP_CAROLIEiJ_G0031951	Srpr	86	89.394	Mus_caroli
ENSTRUG00000006856	srpra	100	67.278	ENSMUSG00000032042	Srpr	86	88.636	Mus_musculus
ENSTRUG00000006856	srpra	100	67.584	MGP_PahariEiJ_G0014816	Srpr	86	88.636	Mus_pahari
ENSTRUG00000006856	srpra	100	64.723	MGP_SPRETEiJ_G0033075	Srpr	100	63.582	Mus_spretus
ENSTRUG00000006856	srpra	100	67.791	ENSMPUG00000006626	SRPRA	100	66.362	Mustela_putorius_furo
ENSTRUG00000006856	srpra	100	67.278	ENSMLUG00000017334	SRPRA	100	66.667	Myotis_lucifugus
ENSTRUG00000006856	srpra	100	66.770	ENSNGAG00000015686	Srpr	100	66.412	Nannospalax_galili
ENSTRUG00000006856	srpra	100	83.692	ENSNBRG00000017311	srpra	100	83.846	Neolamprologus_brichardi
ENSTRUG00000006856	srpra	99	64.000	ENSNLEG00000007467	SRPRA	100	65.794	Nomascus_leucogenys
ENSTRUG00000006856	srpra	94	66.830	ENSMEUG00000004956	SRPRA	100	64.833	Notamacropus_eugenii
ENSTRUG00000006856	srpra	100	62.801	ENSOPRG00000013160	SRPRA	100	62.500	Ochotona_princeps
ENSTRUG00000006856	srpra	100	67.228	ENSODEG00000004730	SRPRA	100	66.718	Octodon_degus
ENSTRUG00000006856	srpra	100	83.692	ENSONIG00000005324	srpra	100	84.000	Oreochromis_niloticus
ENSTRUG00000006856	srpra	100	67.737	ENSOCUG00000017057	SRPRA	100	66.667	Oryctolagus_cuniculus
ENSTRUG00000006856	srpra	100	82.481	ENSORLG00000014676	srpra	100	82.326	Oryzias_latipes
ENSTRUG00000006856	srpra	100	82.791	ENSORLG00020009240	srpra	100	82.636	Oryzias_latipes_hni
ENSTRUG00000006856	srpra	100	82.636	ENSORLG00015015405	srpra	100	82.481	Oryzias_latipes_hsok
ENSTRUG00000006856	srpra	100	83.256	ENSOMEG00000005872	srpra	100	83.101	Oryzias_melastigma
ENSTRUG00000006856	srpra	100	67.134	ENSOGAG00000008926	SRPRA	100	66.511	Otolemur_garnettii
ENSTRUG00000006856	srpra	100	64.551	ENSOARG00000012397	SRPRA	100	65.170	Ovis_aries
ENSTRUG00000006856	srpra	100	67.431	ENSPPAG00000030813	SRPRA	100	66.719	Pan_paniscus
ENSTRUG00000006856	srpra	100	67.391	ENSPPRG00000001542	SRPRA	100	65.224	Panthera_pardus
ENSTRUG00000006856	srpra	100	67.236	ENSPTIG00000006989	SRPRA	100	65.070	Panthera_tigris_altaica
ENSTRUG00000006856	srpra	100	67.431	ENSPTRG00000028360	SRPRA	100	66.719	Pan_troglodytes
ENSTRUG00000006856	srpra	100	67.584	ENSPANG00000010858	SRPRA	100	66.407	Papio_anubis
ENSTRUG00000006856	srpra	100	75.767	ENSPKIG00000016106	srpra	100	74.921	Paramormyrops_kingsleyae
ENSTRUG00000006856	srpra	94	70.376	ENSPSIG00000012009	SRPRA	100	70.261	Pelodiscus_sinensis
ENSTRUG00000006856	srpra	100	82.380	ENSPMGG00000001393	srpra	100	82.380	Periophthalmus_magnuspinnatus
ENSTRUG00000006856	srpra	100	67.431	ENSPEMG00000018279	Srpr	100	66.615	Peromyscus_maniculatus_bairdii
ENSTRUG00000006856	srpra	99	62.150	ENSPMAG00000009559	srpra	99	62.402	Petromyzon_marinus
ENSTRUG00000006856	srpra	100	67.081	ENSPCIG00000010207	SRPRA	100	67.083	Phascolarctos_cinereus
ENSTRUG00000006856	srpra	100	84.923	ENSPFOG00000003114	srpra	100	85.561	Poecilia_formosa
ENSTRUG00000006856	srpra	100	84.769	ENSPLAG00000007323	srpra	100	85.561	Poecilia_latipinna
ENSTRUG00000006856	srpra	100	84.769	ENSPMEG00000015658	srpra	100	85.407	Poecilia_mexicana
ENSTRUG00000006856	srpra	100	84.769	ENSPREG00000004937	srpra	100	85.407	Poecilia_reticulata
ENSTRUG00000006856	srpra	88	85.526	ENSPPYG00000004045	SRPRA	100	85.526	Pongo_abelii
ENSTRUG00000006856	srpra	62	89.922	ENSPCAG00000003801	-	62	89.922	Procavia_capensis
ENSTRUG00000006856	srpra	100	66.771	ENSPCOG00000025726	SRPRA	100	66.147	Propithecus_coquereli
ENSTRUG00000006856	srpra	100	67.188	ENSPVAG00000000993	SRPRA	100	66.875	Pteropus_vampyrus
ENSTRUG00000006856	srpra	100	84.154	ENSPNYG00000012371	srpra	100	84.308	Pundamilia_nyererei
ENSTRUG00000006856	srpra	94	92.089	ENSPNAG00000013476	srpra	100	77.727	Pygocentrus_nattereri
ENSTRUG00000006856	srpra	100	67.431	ENSRNOG00000010543	Srpra	100	66.615	Rattus_norvegicus
ENSTRUG00000006856	srpra	100	67.431	ENSRBIG00000008702	SRPRA	100	66.252	Rhinopithecus_bieti
ENSTRUG00000006856	srpra	100	67.584	ENSRROG00000029494	SRPRA	100	66.460	Rhinopithecus_roxellana
ENSTRUG00000006856	srpra	56	40.157	YDR292C	-	52	41.641	Saccharomyces_cerevisiae
ENSTRUG00000006856	srpra	100	66.972	ENSSBOG00000035892	SRPRA	100	65.941	Saimiri_boliviensis_boliviensis
ENSTRUG00000006856	srpra	94	66.882	ENSSHAG00000009168	SRPRA	100	65.643	Sarcophilus_harrisii
ENSTRUG00000006856	srpra	100	75.772	ENSSFOG00015008837	srpra	100	75.941	Scleropages_formosus
ENSTRUG00000006856	srpra	100	79.741	ENSSMAG00000002783	srpra	100	79.741	Scophthalmus_maximus
ENSTRUG00000006856	srpra	100	85.890	ENSSDUG00000013920	srpra	100	82.324	Seriola_dumerili
ENSTRUG00000006856	srpra	100	85.890	ENSSLDG00000008601	srpra	93	85.736	Seriola_lalandi_dorsalis
ENSTRUG00000006856	srpra	81	82.927	ENSSARG00000012434	SRPRA	86	82.927	Sorex_araneus
ENSTRUG00000006856	srpra	100	70.353	ENSSPUG00000018221	SRPRA	100	69.432	Sphenodon_punctatus
ENSTRUG00000006856	srpra	93	95.556	ENSSPAG00000005103	srpra	100	87.423	Stegastes_partitus
ENSTRUG00000006856	srpra	100	66.970	ENSSSCG00000015227	SRPRA	100	66.563	Sus_scrofa
ENSTRUG00000006856	srpra	94	69.458	ENSTGUG00000000815	SRPRA	100	68.473	Taeniopygia_guttata
ENSTRUG00000006856	srpra	100	87.405	ENSTNIG00000010316	srpra	100	87.253	Tetraodon_nigroviridis
ENSTRUG00000006856	srpra	100	67.890	ENSTTRG00000001558	SRPRA	100	67.236	Tursiops_truncatus
ENSTRUG00000006856	srpra	100	67.226	ENSUAMG00000005510	SRPRA	100	65.957	Ursus_americanus
ENSTRUG00000006856	srpra	96	61.709	ENSUMAG00000002269	SRPRA	100	61.429	Ursus_maritimus
ENSTRUG00000006856	srpra	69	89.922	ENSVPAG00000001077	SRPRA	75	89.922	Vicugna_pacos
ENSTRUG00000006856	srpra	100	66.819	ENSVVUG00000020094	SRPRA	100	65.601	Vulpes_vulpes
ENSTRUG00000006856	srpra	100	61.002	ENSXETG00000003920	srpra	100	59.271	Xenopus_tropicalis
ENSTRUG00000006856	srpra	87	94.294	ENSXCOG00000001286	srpra	100	94.294	Xiphophorus_couchianus
ENSTRUG00000006856	srpra	100	84.414	ENSXMAG00000028401	srpra	100	84.592	Xiphophorus_maculatus