EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTRUG00000006896 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Takifugu_rubripes
Status: putative
Strand: Plus strand
Length: 7997 bases
Position: chrHE591779.1:81309-89305
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTRUP00000016923	zf-C2H2	PF00096.26	6e-55	1	10
ENSTRUP00000016923	zf-C2H2	PF00096.26	6e-55	2	10
ENSTRUP00000016923	zf-C2H2	PF00096.26	6e-55	3	10
ENSTRUP00000016923	zf-C2H2	PF00096.26	6e-55	4	10
ENSTRUP00000016923	zf-C2H2	PF00096.26	6e-55	5	10
ENSTRUP00000016923	zf-C2H2	PF00096.26	6e-55	6	10
ENSTRUP00000016923	zf-C2H2	PF00096.26	6e-55	7	10
ENSTRUP00000016923	zf-C2H2	PF00096.26	6e-55	8	10
ENSTRUP00000016923	zf-C2H2	PF00096.26	6e-55	9	10
ENSTRUP00000016923	zf-C2H2	PF00096.26	6e-55	10	10
ENSTRUP00000016917	zf-C2H2	PF00096.26	4.9e-51	1	8
ENSTRUP00000016917	zf-C2H2	PF00096.26	4.9e-51	2	8
ENSTRUP00000016917	zf-C2H2	PF00096.26	4.9e-51	3	8
ENSTRUP00000016917	zf-C2H2	PF00096.26	4.9e-51	4	8
ENSTRUP00000016917	zf-C2H2	PF00096.26	4.9e-51	5	8
ENSTRUP00000016917	zf-C2H2	PF00096.26	4.9e-51	6	8
ENSTRUP00000016917	zf-C2H2	PF00096.26	4.9e-51	7	8
ENSTRUP00000016917	zf-C2H2	PF00096.26	4.9e-51	8	8
ENSTRUP00000016921	zf-C2H2	PF00096.26	1.6e-35	1	6
ENSTRUP00000016921	zf-C2H2	PF00096.26	1.6e-35	2	6
ENSTRUP00000016921	zf-C2H2	PF00096.26	1.6e-35	3	6
ENSTRUP00000016921	zf-C2H2	PF00096.26	1.6e-35	4	6
ENSTRUP00000016921	zf-C2H2	PF00096.26	1.6e-35	5	6
ENSTRUP00000016921	zf-C2H2	PF00096.26	1.6e-35	6	6
ENSTRUP00000016923	zf-met	PF12874.7	2.1e-09	1	2
ENSTRUP00000016923	zf-met	PF12874.7	2.1e-09	2	2
ENSTRUP00000016917	zf-met	PF12874.7	1.2e-08	1	1
ENSTRUP00000016921	zf-met	PF12874.7	8.5e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTRUT00000016994	-	900	-	ENSTRUP00000016921	299 (aa)	-	H2SWY3
ENSTRUT00000016996	-	1200	-	ENSTRUP00000016923	399 (aa)	-	H2SWY5
ENSTRUT00000016990	-	1557	-	ENSTRUP00000016917	518 (aa)	-	H2SWX9

Gene Model

Click here to download ENSTRUG00000006896's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTRUG00000006896's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTRUG00000006896	-	88	35.652	ENSTRUG00000006180	si:ch211-216l23.1	91	38.889
ENSTRUG00000006896	-	88	34.074	ENSTRUG00000015366	patz1	61	35.172
ENSTRUG00000006896	-	96	44.853	ENSTRUG00000000995	-	87	46.341
ENSTRUG00000006896	-	87	54.930	ENSTRUG00000013906	-	98	55.212
ENSTRUG00000006896	-	83	30.556	ENSTRUG00000016621	hinfp	52	30.822
ENSTRUG00000006896	-	85	38.916	ENSTRUG00000008615	zbtb48	56	38.916
ENSTRUG00000006896	-	85	45.693	ENSTRUG00000022919	-	89	50.739
ENSTRUG00000006896	-	83	45.333	ENSTRUG00000018659	prdm12b	60	45.333
ENSTRUG00000006896	-	84	47.590	ENSTRUG00000023491	-	97	43.030
ENSTRUG00000006896	-	84	31.502	ENSTRUG00000005241	gtf3ab	81	33.721
ENSTRUG00000006896	-	81	42.727	ENSTRUG00000012719	-	51	42.727
ENSTRUG00000006896	-	98	46.522	ENSTRUG00000022515	-	82	51.445
ENSTRUG00000006896	-	96	37.600	ENSTRUG00000007620	scrt2	62	37.600
ENSTRUG00000006896	-	91	46.341	ENSTRUG00000024009	-	74	46.341
ENSTRUG00000006896	-	92	31.841	ENSTRUG00000024008	-	60	30.288
ENSTRUG00000006896	-	95	50.218	ENSTRUG00000012273	-	90	48.249
ENSTRUG00000006896	-	90	40.500	ENSTRUG00000022066	-	91	38.071
ENSTRUG00000006896	-	89	43.729	ENSTRUG00000024073	-	71	43.729
ENSTRUG00000006896	-	86	38.220	ENSTRUG00000014476	-	89	39.205
ENSTRUG00000006896	-	100	51.579	ENSTRUG00000007022	-	95	51.579
ENSTRUG00000006896	-	95	37.975	ENSTRUG00000017456	znf236	66	40.000
ENSTRUG00000006896	-	90	38.400	ENSTRUG00000025588	snai2	65	38.400
ENSTRUG00000006896	-	99	46.897	ENSTRUG00000019483	-	100	48.165
ENSTRUG00000006896	-	90	34.030	ENSTRUG00000005880	-	68	35.235
ENSTRUG00000006896	-	83	45.333	ENSTRUG00000013239	-	70	45.333
ENSTRUG00000006896	-	95	52.679	ENSTRUG00000020582	-	97	51.136
ENSTRUG00000006896	-	81	42.727	ENSTRUG00000019558	-	54	42.727
ENSTRUG00000006896	-	96	48.837	ENSTRUG00000022206	-	84	47.163
ENSTRUG00000006896	-	86	47.345	ENSTRUG00000023925	-	91	47.345
ENSTRUG00000006896	-	84	38.579	ENSTRUG00000011097	-	50	38.579
ENSTRUG00000006896	-	98	50.323	ENSTRUG00000021765	-	89	50.323
ENSTRUG00000006896	-	84	46.360	ENSTRUG00000022076	-	80	46.360
ENSTRUG00000006896	-	90	43.455	ENSTRUG00000005321	-	99	43.455
ENSTRUG00000006896	-	88	54.667	ENSTRUG00000003111	-	98	54.483
ENSTRUG00000006896	-	87	60.177	ENSTRUG00000025189	-	64	60.177
ENSTRUG00000006896	-	83	42.857	ENSTRUG00000011385	znf341	52	31.602
ENSTRUG00000006896	-	93	37.778	ENSTRUG00000021167	-	55	37.778
ENSTRUG00000006896	-	85	50.000	ENSTRUG00000003277	zbtb17	95	50.000
ENSTRUG00000006896	-	95	35.115	ENSTRUG00000025881	-	76	39.928
ENSTRUG00000006896	-	95	43.060	ENSTRUG00000015687	-	97	42.484
ENSTRUG00000006896	-	93	39.799	ENSTRUG00000021675	-	96	39.799
ENSTRUG00000006896	-	98	39.394	ENSTRUG00000019685	znf319b	90	39.394
ENSTRUG00000006896	-	97	36.036	ENSTRUG00000020495	si:dkey-89b17.4	89	36.036
ENSTRUG00000006896	-	84	38.408	ENSTRUG00000003454	-	75	38.408
ENSTRUG00000006896	-	86	39.655	ENSTRUG00000003369	sall3b	56	39.655
ENSTRUG00000006896	-	85	31.313	ENSTRUG00000001452	PRDM15	56	33.533
ENSTRUG00000006896	-	98	46.243	ENSTRUG00000020208	-	96	46.243
ENSTRUG00000006896	-	95	45.349	ENSTRUG00000023354	-	56	44.318
ENSTRUG00000006896	-	84	44.643	ENSTRUG00000004525	gfi1b	52	44.928
ENSTRUG00000006896	-	87	40.141	ENSTRUG00000022666	-	51	40.426
ENSTRUG00000006896	-	90	40.659	ENSTRUG00000022843	-	71	40.659
ENSTRUG00000006896	-	84	39.474	ENSTRUG00000013850	prdm5	88	39.474
ENSTRUG00000006896	-	87	57.672	ENSTRUG00000005180	-	86	57.672
ENSTRUG00000006896	-	83	44.068	ENSTRUG00000022969	-	81	44.068
ENSTRUG00000006896	-	85	52.688	ENSTRUG00000001268	-	98	52.688
ENSTRUG00000006896	-	84	43.321	ENSTRUG00000019940	-	60	43.411
ENSTRUG00000006896	-	78	31.655	ENSTRUG00000019941	-	58	31.655
ENSTRUG00000006896	-	84	44.643	ENSTRUG00000000415	gfi1ab	51	44.643
ENSTRUG00000006896	-	82	35.185	ENSTRUG00000000419	sna2	54	36.893
ENSTRUG00000006896	-	92	35.849	ENSTRUG00000025597	znf646	87	37.234
ENSTRUG00000006896	-	92	44.048	ENSTRUG00000004744	gfi1aa	56	44.048
ENSTRUG00000006896	-	97	35.942	ENSTRUG00000012157	-	97	35.942
ENSTRUG00000006896	-	86	39.556	ENSTRUG00000004550	znf384l	52	38.863
ENSTRUG00000006896	-	92	39.200	ENSTRUG00000011637	scrt1b	70	39.200

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTRUG00000006896	-	84	49.846	ENSAMXG00000000353	-	95	49.846	Astyanax_mexicanus
ENSTRUG00000006896	-	84	47.347	ENSAMXG00000034096	-	94	47.305	Astyanax_mexicanus
ENSTRUG00000006896	-	87	45.327	ENSAMXG00000043019	-	99	45.327	Astyanax_mexicanus
ENSTRUG00000006896	-	87	47.797	ENSAMXG00000044028	-	97	48.404	Astyanax_mexicanus
ENSTRUG00000006896	-	94	48.936	ENSAMXG00000029783	-	96	48.936	Astyanax_mexicanus
ENSTRUG00000006896	-	85	44.839	ENSBTAG00000014593	-	90	44.179	Bos_taurus
ENSTRUG00000006896	-	86	48.571	ENSBTAG00000040358	-	100	48.571	Bos_taurus
ENSTRUG00000006896	-	83	46.309	ENSCSAG00000000471	-	97	48.295	Chlorocebus_sabaeus
ENSTRUG00000006896	-	89	41.063	ENSCPBG00000009609	-	96	38.743	Chrysemys_picta_bellii
ENSTRUG00000006896	-	96	45.574	ENSCPBG00000002430	-	83	45.926	Chrysemys_picta_bellii
ENSTRUG00000006896	-	81	48.611	ENSDNOG00000047529	-	69	48.611	Dasypus_novemcinctus
ENSTRUG00000006896	-	89	47.222	ENSDNOG00000042588	-	96	47.222	Dasypus_novemcinctus
ENSTRUG00000006896	-	84	42.361	ENSEBUG00000016969	-	78	42.361	Eptatretus_burgeri
ENSTRUG00000006896	-	84	46.586	ENSEBUG00000013221	-	80	46.586	Eptatretus_burgeri
ENSTRUG00000006896	-	84	44.805	ENSEBUG00000016164	-	69	44.118	Eptatretus_burgeri
ENSTRUG00000006896	-	91	50.000	ENSELUG00000019008	-	97	44.970	Esox_lucius
ENSTRUG00000006896	-	84	49.123	ENSFCAG00000043966	-	99	49.635	Felis_catus
ENSTRUG00000006896	-	96	45.421	ENSGAFG00000013048	-	94	46.429	Gambusia_affinis
ENSTRUG00000006896	-	95	49.530	ENSGAFG00000021131	-	93	49.530	Gambusia_affinis
ENSTRUG00000006896	-	87	49.117	ENSGGOG00000042802	-	97	49.219	Gorilla_gorilla
ENSTRUG00000006896	-	96	43.791	ENSHCOG00000019512	-	98	43.034	Hippocampus_comes
ENSTRUG00000006896	-	95	46.815	ENSHCOG00000014713	-	97	47.331	Hippocampus_comes
ENSTRUG00000006896	-	83	47.315	ENSMFAG00000008648	-	97	49.432	Macaca_fascicularis
ENSTRUG00000006896	-	83	47.315	ENSMNEG00000001556	-	97	49.432	Macaca_nemestrina
ENSTRUG00000006896	-	83	46.980	ENSMLEG00000007035	-	97	48.864	Mandrillus_leucophaeus
ENSTRUG00000006896	-	97	47.000	ENSMAUG00000015263	-	69	45.345	Mesocricetus_auratus
ENSTRUG00000006896	-	97	45.685	ENSMOCG00000003394	-	67	46.885	Microtus_ochrogaster
ENSTRUG00000006896	-	93	44.509	ENSMODG00000028916	-	70	44.509	Monodelphis_domestica
ENSTRUG00000006896	-	85	45.729	ENSMPUG00000006562	-	69	45.729	Mustela_putorius_furo
ENSTRUG00000006896	-	96	51.323	ENSNBRG00000010194	-	97	53.333	Neolamprologus_brichardi
ENSTRUG00000006896	-	87	49.117	ENSNLEG00000018988	-	97	50.413	Nomascus_leucogenys
ENSTRUG00000006896	-	84	46.218	ENSMEUG00000006978	-	93	45.860	Notamacropus_eugenii
ENSTRUG00000006896	-	84	45.210	ENSMEUG00000012153	-	67	49.324	Notamacropus_eugenii
ENSTRUG00000006896	-	87	39.333	ENSOGAG00000024538	-	59	43.922	Otolemur_garnettii
ENSTRUG00000006896	-	87	49.117	ENSPPAG00000014496	-	97	49.219	Pan_paniscus
ENSTRUG00000006896	-	83	46.980	ENSPANG00000030207	-	97	48.864	Papio_anubis
ENSTRUG00000006896	-	87	46.377	ENSPSIG00000010405	-	99	50.709	Pelodiscus_sinensis
ENSTRUG00000006896	-	86	44.482	ENSPSIG00000009650	-	81	44.718	Pelodiscus_sinensis
ENSTRUG00000006896	-	97	45.918	ENSPEMG00000010242	-	71	47.000	Peromyscus_maniculatus_bairdii
ENSTRUG00000006896	-	95	46.429	ENSPLAG00000020710	-	94	38.596	Poecilia_latipinna
ENSTRUG00000006896	-	97	43.353	ENSPLAG00000010389	-	99	39.205	Poecilia_latipinna
ENSTRUG00000006896	-	96	44.512	ENSPLAG00000021062	-	98	44.512	Poecilia_latipinna
ENSTRUG00000006896	-	88	50.316	ENSPCAG00000009106	-	84	51.148	Procavia_capensis
ENSTRUG00000006896	-	88	38.351	ENSPNYG00000024243	-	92	42.484	Pundamilia_nyererei
ENSTRUG00000006896	-	89	45.506	ENSPNAG00000018644	-	97	46.512	Pygocentrus_nattereri
ENSTRUG00000006896	-	84	44.231	ENSSHAG00000001415	-	83	45.581	Sarcophilus_harrisii
ENSTRUG00000006896	-	96	51.293	ENSSDUG00000009534	-	86	51.190	Seriola_dumerili
ENSTRUG00000006896	-	94	51.692	ENSSLDG00000013760	-	99	50.952	Seriola_lalandi_dorsalis
ENSTRUG00000006896	-	87	46.906	ENSSPUG00000007147	-	99	46.906	Sphenodon_punctatus
ENSTRUG00000006896	-	92	50.671	ENSVPAG00000011867	-	91	50.671	Vicugna_pacos
ENSTRUG00000006896	-	85	41.414	ENSXCOG00000009794	-	84	41.414	Xiphophorus_couchianus