EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTRUG00000006949 (Gene tree)
Gene ID: 101064989
Gene Symbol: shrprbck1r
Alias: sipl1-rbck1|zgc:175152
Full Name: ranBP-type and C3HC4-type zinc finger-containing protein 1
Gene Type: protein_coding
Species: Takifugu_rubripes
Status: putative
Strand: Plus strand
Length: 11628 bases
Position: chr10:1936549-1948176
Accession: 101064989
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTRUP00000017061	zf-RanBP	PF00641.18	1.8e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTRUT00000017134	-	2061	XM_011607798	ENSTRUP00000017061	686 (aa)	XP_011606100	H2SXC3

Gene Model

Click here to download ENSTRUG00000006949's gene model file

Pathways

Pathway ID	Pathway Name	Source
tru04217	Necroptosis	KEGG
tru04621	NOD-like receptor signaling pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSTRUG00000006949's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTRUG00000006949	shrprbck1r	58	50.704	ENSTRUG00000011046	sharpin	96	50.235

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTRUG00000006949	shrprbck1r	58	55.916	ENSAPOG00000023352	sharpin	95	55.452	Acanthochromis_polyacanthus
ENSTRUG00000006949	shrprbck1r	100	81.742	ENSAPOG00000022737	shrprbck1r	100	81.742	Acanthochromis_polyacanthus
ENSTRUG00000006949	shrprbck1r	100	78.090	ENSACIG00000002184	shrprbck1r	100	78.090	Amphilophus_citrinellus
ENSTRUG00000006949	shrprbck1r	58	55.916	ENSAOCG00000017464	sharpin	95	55.452	Amphiprion_ocellaris
ENSTRUG00000006949	shrprbck1r	100	81.818	ENSAOCG00000002890	shrprbck1r	100	80.979	Amphiprion_ocellaris
ENSTRUG00000006949	shrprbck1r	100	83.167	ENSAPEG00000023274	shrprbck1r	100	83.167	Amphiprion_percula
ENSTRUG00000006949	shrprbck1r	58	55.916	ENSAPEG00000004049	sharpin	95	55.452	Amphiprion_percula
ENSTRUG00000006949	shrprbck1r	100	81.571	ENSATEG00000014561	shrprbck1r	100	81.571	Anabas_testudineus
ENSTRUG00000006949	shrprbck1r	58	55.324	ENSATEG00000007832	sharpin	88	54.861	Anabas_testudineus
ENSTRUG00000006949	shrprbck1r	100	81.295	ENSACLG00000022609	shrprbck1r	100	81.295	Astatotilapia_calliptera
ENSTRUG00000006949	shrprbck1r	100	67.397	ENSAMXG00000021016	shrprbck1r	100	66.621	Astyanax_mexicanus
ENSTRUG00000006949	shrprbck1r	53	56.955	ENSAMXG00000006229	sharpin	97	56.955	Astyanax_mexicanus
ENSTRUG00000006949	shrprbck1r	100	75.813	ENSCSEG00000011306	shrprbck1r	100	75.813	Cynoglossus_semilaevis
ENSTRUG00000006949	shrprbck1r	100	75.281	ENSCVAG00000007250	shrprbck1r	100	74.579	Cyprinodon_variegatus
ENSTRUG00000006949	shrprbck1r	58	53.271	ENSCVAG00000006586	sharpin	95	53.037	Cyprinodon_variegatus
ENSTRUG00000006949	shrprbck1r	53	53.846	ENSDARG00000076995	sharpin	94	53.846	Danio_rerio
ENSTRUG00000006949	shrprbck1r	100	69.806	ENSDARG00000059871	shrprbck1r	100	70.139	Danio_rerio
ENSTRUG00000006949	shrprbck1r	100	71.151	ENSELUG00000016022	shrprbck1r	88	87.692	Esox_lucius
ENSTRUG00000006949	shrprbck1r	58	53.953	ENSFHEG00000013564	sharpin	94	53.271	Fundulus_heteroclitus
ENSTRUG00000006949	shrprbck1r	58	45.025	ENSGAFG00000021405	sharpin	95	45.050	Gambusia_affinis
ENSTRUG00000006949	shrprbck1r	100	74.579	ENSGAFG00000009309	shrprbck1r	100	73.876	Gambusia_affinis
ENSTRUG00000006949	shrprbck1r	78	79.550	ENSGACG00000002544	shrprbck1r	100	79.550	Gasterosteus_aculeatus
ENSTRUG00000006949	shrprbck1r	100	79.213	ENSHBUG00000021933	shrprbck1r	100	79.213	Haplochromis_burtoni
ENSTRUG00000006949	shrprbck1r	58	52.009	ENSHCOG00000018847	sharpin	80	52.009	Hippocampus_comes
ENSTRUG00000006949	shrprbck1r	50	73.529	ENSIPUG00000011951	sharpin	98	73.529	Ictalurus_punctatus
ENSTRUG00000006949	shrprbck1r	96	66.858	ENSIPUG00000014247	shrprbck1r	97	65.867	Ictalurus_punctatus
ENSTRUG00000006949	shrprbck1r	100	76.316	ENSKMAG00000015215	shrprbck1r	100	75.485	Kryptolebias_marmoratus
ENSTRUG00000006949	shrprbck1r	58	57.279	ENSKMAG00000015204	sharpin	76	56.802	Kryptolebias_marmoratus
ENSTRUG00000006949	shrprbck1r	58	55.658	ENSLBEG00000016624	sharpin	96	55.196	Labrus_bergylta
ENSTRUG00000006949	shrprbck1r	100	82.022	ENSLBEG00000016876	shrprbck1r	100	82.022	Labrus_bergylta
ENSTRUG00000006949	shrprbck1r	95	52.256	ENSLACG00000010948	-	97	51.965	Latimeria_chalumnae
ENSTRUG00000006949	shrprbck1r	100	66.528	ENSLOCG00000008910	shrprbck1r	100	66.528	Lepisosteus_oculatus
ENSTRUG00000006949	shrprbck1r	100	78.531	ENSMAMG00000022930	shrprbck1r	100	78.531	Mastacembelus_armatus
ENSTRUG00000006949	shrprbck1r	100	79.213	ENSMZEG00005021257	shrprbck1r	100	79.213	Maylandia_zebra
ENSTRUG00000006949	shrprbck1r	58	44.140	ENSMMOG00000016788	sharpin	88	65.714	Mola_mola
ENSTRUG00000006949	shrprbck1r	100	81.197	ENSMMOG00000003764	shrprbck1r	100	81.339	Mola_mola
ENSTRUG00000006949	shrprbck1r	95	79.941	ENSMALG00000008861	shrprbck1r	95	79.941	Monopterus_albus
ENSTRUG00000006949	shrprbck1r	100	79.354	ENSNBRG00000002270	shrprbck1r	100	79.354	Neolamprologus_brichardi
ENSTRUG00000006949	shrprbck1r	100	79.213	ENSONIG00000014401	shrprbck1r	100	79.213	Oreochromis_niloticus
ENSTRUG00000006949	shrprbck1r	53	53.041	ENSONIG00000009626	-	97	52.555	Oreochromis_niloticus
ENSTRUG00000006949	shrprbck1r	58	53.580	ENSORLG00000017281	sharpin	95	52.887	Oryzias_latipes
ENSTRUG00000006949	shrprbck1r	100	76.404	ENSORLG00000007392	shrprbck1r	100	76.404	Oryzias_latipes
ENSTRUG00000006949	shrprbck1r	100	76.404	ENSORLG00020018619	shrprbck1r	100	76.404	Oryzias_latipes_hni
ENSTRUG00000006949	shrprbck1r	58	53.687	ENSORLG00020000801	sharpin	95	52.995	Oryzias_latipes_hni
ENSTRUG00000006949	shrprbck1r	58	53.917	ENSORLG00015009860	sharpin	95	53.226	Oryzias_latipes_hsok
ENSTRUG00000006949	shrprbck1r	100	75.983	ENSORLG00015018865	shrprbck1r	100	74.860	Oryzias_latipes_hsok
ENSTRUG00000006949	shrprbck1r	100	77.528	ENSOMEG00000012749	shrprbck1r	100	76.685	Oryzias_melastigma
ENSTRUG00000006949	shrprbck1r	63	57.173	ENSPKIG00000018308	-	95	57.173	Paramormyrops_kingsleyae
ENSTRUG00000006949	shrprbck1r	100	68.384	ENSPKIG00000006933	shrprbck1r	100	67.967	Paramormyrops_kingsleyae
ENSTRUG00000006949	shrprbck1r	100	76.028	ENSPMGG00000013254	shrprbck1r	100	75.603	Periophthalmus_magnuspinnatus
ENSTRUG00000006949	shrprbck1r	58	53.023	ENSPFOG00000015253	sharpin	95	52.326	Poecilia_formosa
ENSTRUG00000006949	shrprbck1r	100	75.562	ENSPFOG00000004214	shrprbck1r	100	74.860	Poecilia_formosa
ENSTRUG00000006949	shrprbck1r	100	75.281	ENSPLAG00000020523	shrprbck1r	100	74.579	Poecilia_latipinna
ENSTRUG00000006949	shrprbck1r	58	53.256	ENSPLAG00000000423	sharpin	95	52.558	Poecilia_latipinna
ENSTRUG00000006949	shrprbck1r	58	46.734	ENSPMEG00000023030	sharpin	89	46.115	Poecilia_mexicana
ENSTRUG00000006949	shrprbck1r	100	75.882	ENSPMEG00000006877	shrprbck1r	100	75.176	Poecilia_mexicana
ENSTRUG00000006949	shrprbck1r	58	52.791	ENSPREG00000009702	sharpin	95	52.093	Poecilia_reticulata
ENSTRUG00000006949	shrprbck1r	100	74.752	ENSPREG00000014689	shrprbck1r	100	74.184	Poecilia_reticulata
ENSTRUG00000006949	shrprbck1r	100	79.635	ENSPNYG00000022601	shrprbck1r	100	79.635	Pundamilia_nyererei
ENSTRUG00000006949	shrprbck1r	53	57.377	ENSPNAG00000002911	sharpin	99	57.493	Pygocentrus_nattereri
ENSTRUG00000006949	shrprbck1r	100	66.575	ENSPNAG00000007847	shrprbck1r	100	66.621	Pygocentrus_nattereri
ENSTRUG00000006949	shrprbck1r	62	44.309	ENSSFOG00015004028	sharpin	99	44.533	Scleropages_formosus
ENSTRUG00000006949	shrprbck1r	78	63.670	ENSSFOG00015014150	-	96	63.178	Scleropages_formosus
ENSTRUG00000006949	shrprbck1r	100	78.303	ENSSMAG00000018085	shrprbck1r	100	78.303	Scophthalmus_maximus
ENSTRUG00000006949	shrprbck1r	59	46.024	ENSSDUG00000019039	sharpin	96	45.542	Seriola_dumerili
ENSTRUG00000006949	shrprbck1r	100	81.435	ENSSDUG00000002959	shrprbck1r	100	81.435	Seriola_dumerili
ENSTRUG00000006949	shrprbck1r	100	81.435	ENSSLDG00000009026	shrprbck1r	100	81.435	Seriola_lalandi_dorsalis
ENSTRUG00000006949	shrprbck1r	96	81.672	ENSSPAG00000016097	shrprbck1r	99	81.672	Stegastes_partitus
ENSTRUG00000006949	shrprbck1r	53	53.350	ENSTNIG00000008521	sharpin	94	52.854	Tetraodon_nigroviridis
ENSTRUG00000006949	shrprbck1r	100	75.250	ENSXCOG00000006701	shrprbck1r	100	74.535	Xiphophorus_couchianus
ENSTRUG00000006949	shrprbck1r	100	75.107	ENSXMAG00000018972	shrprbck1r	100	74.392	Xiphophorus_maculatus
ENSTRUG00000006949	shrprbck1r	58	53.023	ENSXMAG00000022076	sharpin	95	52.326	Xiphophorus_maculatus