EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSTRUG00000007031 (Gene tree)
Gene ID: 101068794
Gene Symbol: snrnp48
Alias: fd10a06|wu:fd10a06
Full Name: small nuclear ribonucleoprotein U11/U12 subunit 48
Gene Type: protein_coding
Species: Takifugu_rubripes
Status: putative
Strand: Plus strand
Length: 4062 bases
Position: chrHE591746.1:191324-195385
Accession: 101068794
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTRUP00000017268	zf-U11-48K	PF05253.12	1.6e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTRUT00000017342	-	1600	XM_011618858	ENSTRUP00000017268	337 (aa)	XP_011617160	H2SXY0

Gene Model

Click here to download ENSTRUG00000007031's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTRUG00000007031's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTRUG00000007031	snrnp48	93	43.653	ENSG00000168566	SNRNP48	92	42.405	Homo_sapiens
ENSTRUG00000007031	snrnp48	94	72.615	ENSAPOG00000021430	snrnp48	95	67.284	Acanthochromis_polyacanthus
ENSTRUG00000007031	snrnp48	74	51.575	ENSAMEG00000017349	SNRNP48	69	52.066	Ailuropoda_melanoleuca
ENSTRUG00000007031	snrnp48	88	66.555	ENSACIG00000002032	snrnp48	95	65.839	Amphilophus_citrinellus
ENSTRUG00000007031	snrnp48	94	71.385	ENSAOCG00000010562	snrnp48	75	76.078	Amphiprion_ocellaris
ENSTRUG00000007031	snrnp48	94	70.769	ENSAPEG00000003231	snrnp48	75	75.686	Amphiprion_percula
ENSTRUG00000007031	snrnp48	92	71.698	ENSATEG00000020210	snrnp48	74	76.190	Anabas_testudineus
ENSTRUG00000007031	snrnp48	80	49.485	ENSACAG00000002811	SNRNP48	62	55.721	Anolis_carolinensis
ENSTRUG00000007031	snrnp48	93	43.963	ENSANAG00000033538	SNRNP48	92	42.722	Aotus_nancymaae
ENSTRUG00000007031	snrnp48	93	51.703	ENSAMXG00000015309	snrnp48	77	56.863	Astyanax_mexicanus
ENSTRUG00000007031	snrnp48	91	43.114	ENSBTAG00000001123	SNRNP48	74	49.012	Bos_taurus
ENSTRUG00000007031	snrnp48	82	48.410	ENSCJAG00000021330	SNRNP48	74	49.603	Callithrix_jacchus
ENSTRUG00000007031	snrnp48	94	44.675	ENSCAFG00000009574	SNRNP48	61	49.801	Canis_familiaris
ENSTRUG00000007031	snrnp48	94	45.266	ENSCAFG00020013203	SNRNP48	73	49.801	Canis_lupus_dingo
ENSTRUG00000007031	snrnp48	91	43.750	ENSCHIG00000015216	SNRNP48	74	49.802	Capra_hircus
ENSTRUG00000007031	snrnp48	80	49.270	ENSTSYG00000000698	SNRNP48	71	50.617	Carlito_syrichta
ENSTRUG00000007031	snrnp48	86	46.032	ENSCAPG00000006768	SNRNP48	72	50.893	Cavia_aperea
ENSTRUG00000007031	snrnp48	94	45.029	ENSCPOG00000007910	SNRNP48	73	49.402	Cavia_porcellus
ENSTRUG00000007031	snrnp48	93	43.963	ENSCCAG00000035652	SNRNP48	92	43.038	Cebus_capucinus
ENSTRUG00000007031	snrnp48	82	47.872	ENSCATG00000033947	SNRNP48	83	39.496	Cercocebus_atys
ENSTRUG00000007031	snrnp48	73	50.794	ENSCLAG00000003765	SNRNP48	71	50.617	Chinchilla_lanigera
ENSTRUG00000007031	snrnp48	93	43.963	ENSCSAG00000007409	SNRNP48	92	42.722	Chlorocebus_sabaeus
ENSTRUG00000007031	snrnp48	84	46.479	ENSCPBG00000019146	SNRNP48	63	54.229	Chrysemys_picta_bellii
ENSTRUG00000007031	snrnp48	93	43.963	ENSCANG00000030017	SNRNP48	92	42.722	Colobus_angolensis_palliatus
ENSTRUG00000007031	snrnp48	87	42.193	ENSCGRG00001008805	-	72	44.635	Cricetulus_griseus_chok1gshd
ENSTRUG00000007031	snrnp48	92	45.482	ENSCGRG00001001076	-	74	49.402	Cricetulus_griseus_chok1gshd
ENSTRUG00000007031	snrnp48	92	45.482	ENSCGRG00000007781	Snrnp48	74	49.402	Cricetulus_griseus_crigri
ENSTRUG00000007031	snrnp48	88	66.107	ENSCSEG00000000722	snrnp48	72	69.804	Cynoglossus_semilaevis
ENSTRUG00000007031	snrnp48	91	71.061	ENSCVAG00000019829	snrnp48	66	75.781	Cyprinodon_variegatus
ENSTRUG00000007031	snrnp48	93	48.930	ENSDARG00000039989	snrnp48	74	54.724	Danio_rerio
ENSTRUG00000007031	snrnp48	82	49.117	ENSDNOG00000014978	SNRNP48	87	42.500	Dasypus_novemcinctus
ENSTRUG00000007031	snrnp48	92	45.509	ENSDORG00000015140	Snrnp48	71	50.410	Dipodomys_ordii
ENSTRUG00000007031	snrnp48	82	48.582	ENSEASG00005012021	SNRNP48	73	49.801	Equus_asinus_asinus
ENSTRUG00000007031	snrnp48	82	48.936	ENSECAG00000026937	SNRNP48	73	50.199	Equus_caballus
ENSTRUG00000007031	snrnp48	80	33.455	ENSEEUG00000015437	SNRNP48	71	34.426	Erinaceus_europaeus
ENSTRUG00000007031	snrnp48	85	56.794	ENSELUG00000009766	snrnp48	72	58.594	Esox_lucius
ENSTRUG00000007031	snrnp48	82	48.582	ENSFCAG00000018853	SNRNP48	73	50.199	Felis_catus
ENSTRUG00000007031	snrnp48	68	53.191	ENSFALG00000007797	SNRNP48	64	55.941	Ficedula_albicollis
ENSTRUG00000007031	snrnp48	82	49.291	ENSFDAG00000009231	SNRNP48	73	49.801	Fukomys_damarensis
ENSTRUG00000007031	snrnp48	61	78.922	ENSFHEG00000014647	snrnp48	94	67.636	Fundulus_heteroclitus
ENSTRUG00000007031	snrnp48	95	58.769	ENSGMOG00000018599	-	78	66.534	Gadus_morhua
ENSTRUG00000007031	snrnp48	80	48.043	ENSGALG00000013005	SNRNP48	67	56.436	Gallus_gallus
ENSTRUG00000007031	snrnp48	86	66.897	ENSGAFG00000021639	snrnp48	74	71.484	Gambusia_affinis
ENSTRUG00000007031	snrnp48	74	72.000	ENSGACG00000017756	-	75	71.713	Gasterosteus_aculeatus
ENSTRUG00000007031	snrnp48	80	45.238	ENSGAGG00000000865	SNRNP48	65	53.731	Gopherus_agassizii
ENSTRUG00000007031	snrnp48	93	43.963	ENSGGOG00000013220	SNRNP48	92	42.722	Gorilla_gorilla
ENSTRUG00000007031	snrnp48	93	70.312	ENSHBUG00000017066	snrnp48	74	74.118	Haplochromis_burtoni
ENSTRUG00000007031	snrnp48	82	48.227	ENSHGLG00000015241	SNRNP48	73	49.402	Heterocephalus_glaber_female
ENSTRUG00000007031	snrnp48	82	48.227	ENSHGLG00100010027	SNRNP48	73	49.402	Heterocephalus_glaber_male
ENSTRUG00000007031	snrnp48	75	70.866	ENSHCOG00000014066	snrnp48	74	70.588	Hippocampus_comes
ENSTRUG00000007031	snrnp48	80	49.635	ENSSTOG00000014635	SNRNP48	71	51.029	Ictidomys_tridecemlineatus
ENSTRUG00000007031	snrnp48	78	48.529	ENSJJAG00000011495	Snrnp48	73	49.801	Jaculus_jaculus
ENSTRUG00000007031	snrnp48	94	67.901	ENSKMAG00000016514	snrnp48	95	66.873	Kryptolebias_marmoratus
ENSTRUG00000007031	snrnp48	82	72.101	ENSLBEG00000026249	snrnp48	95	69.040	Labrus_bergylta
ENSTRUG00000007031	snrnp48	97	46.588	ENSLACG00000003958	SNRNP48	74	52.344	Latimeria_chalumnae
ENSTRUG00000007031	snrnp48	82	56.690	ENSLOCG00000004187	snrnp48	73	58.871	Lepisosteus_oculatus
ENSTRUG00000007031	snrnp48	82	48.057	ENSLAFG00000011152	SNRNP48	73	49.206	Loxodonta_africana
ENSTRUG00000007031	snrnp48	93	43.963	ENSMFAG00000045216	SNRNP48	92	42.722	Macaca_fascicularis
ENSTRUG00000007031	snrnp48	93	43.963	ENSMMUG00000014785	SNRNP48	92	42.722	Macaca_mulatta
ENSTRUG00000007031	snrnp48	93	43.963	ENSMNEG00000042269	SNRNP48	92	42.722	Macaca_nemestrina
ENSTRUG00000007031	snrnp48	93	43.963	ENSMLEG00000034004	SNRNP48	92	42.722	Mandrillus_leucophaeus
ENSTRUG00000007031	snrnp48	94	69.969	ENSMAMG00000018673	snrnp48	66	74.118	Mastacembelus_armatus
ENSTRUG00000007031	snrnp48	80	46.780	ENSMGAG00000006037	SNRNP48	67	56.931	Meleagris_gallopavo
ENSTRUG00000007031	snrnp48	92	45.260	ENSMAUG00000011944	Snrnp48	74	49.004	Mesocricetus_auratus
ENSTRUG00000007031	snrnp48	80	48.727	ENSMICG00000012497	SNRNP48	71	50.000	Microcebus_murinus
ENSTRUG00000007031	snrnp48	92	46.037	ENSMOCG00000015555	Snrnp48	74	49.603	Microtus_ochrogaster
ENSTRUG00000007031	snrnp48	56	82.105	ENSMMOG00000003072	-	60	82.105	Mola_mola
ENSTRUG00000007031	snrnp48	85	44.746	ENSMODG00000009996	SNRNP48	68	46.850	Monodelphis_domestica
ENSTRUG00000007031	snrnp48	82	71.636	ENSMALG00000005725	snrnp48	95	65.217	Monopterus_albus
ENSTRUG00000007031	snrnp48	92	45.732	MGP_CAROLIEiJ_G0018441	Snrnp48	74	49.801	Mus_caroli
ENSTRUG00000007031	snrnp48	92	46.037	ENSMUSG00000021431	Snrnp48	74	49.801	Mus_musculus
ENSTRUG00000007031	snrnp48	92	45.897	MGP_PahariEiJ_G0019509	Snrnp48	74	50.199	Mus_pahari
ENSTRUG00000007031	snrnp48	92	45.181	MGP_SPRETEiJ_G0019321	Snrnp48	74	49.801	Mus_spretus
ENSTRUG00000007031	snrnp48	82	49.645	ENSNGAG00000004849	Snrnp48	73	50.996	Nannospalax_galili
ENSTRUG00000007031	snrnp48	100	68.895	ENSNBRG00000012127	snrnp48	74	73.333	Neolamprologus_brichardi
ENSTRUG00000007031	snrnp48	93	43.963	ENSNLEG00000011667	SNRNP48	92	42.722	Nomascus_leucogenys
ENSTRUG00000007031	snrnp48	71	50.410	ENSOPRG00000015471	SNRNP48	75	50.207	Ochotona_princeps
ENSTRUG00000007031	snrnp48	93	70.938	ENSONIG00000001520	snrnp48	74	74.118	Oreochromis_niloticus
ENSTRUG00000007031	snrnp48	53	35.821	ENSOANG00000019888	-	96	37.313	Ornithorhynchus_anatinus
ENSTRUG00000007031	snrnp48	79	49.815	ENSOCUG00000005168	SNRNP48	79	51.029	Oryctolagus_cuniculus
ENSTRUG00000007031	snrnp48	88	70.432	ENSORLG00000015654	snrnp48	94	64.706	Oryzias_latipes
ENSTRUG00000007031	snrnp48	88	69.799	ENSORLG00020015976	snrnp48	80	64.087	Oryzias_latipes_hni
ENSTRUG00000007031	snrnp48	88	70.134	ENSORLG00015022379	snrnp48	80	64.396	Oryzias_latipes_hsok
ENSTRUG00000007031	snrnp48	93	68.536	ENSOMEG00000022007	snrnp48	94	62.733	Oryzias_melastigma
ENSTRUG00000007031	snrnp48	80	48.000	ENSOGAG00000005275	SNRNP48	76	47.826	Otolemur_garnettii
ENSTRUG00000007031	snrnp48	69	51.055	ENSOARG00000017319	SNRNP48	69	54.455	Ovis_aries
ENSTRUG00000007031	snrnp48	93	43.963	ENSPPAG00000032873	SNRNP48	92	42.722	Pan_paniscus
ENSTRUG00000007031	snrnp48	79	49.084	ENSPPRG00000004283	SNRNP48	73	49.801	Panthera_pardus
ENSTRUG00000007031	snrnp48	69	52.155	ENSPTIG00000013502	SNRNP48	69	54.726	Panthera_tigris_altaica
ENSTRUG00000007031	snrnp48	93	43.963	ENSPTRG00000017703	SNRNP48	92	42.722	Pan_troglodytes
ENSTRUG00000007031	snrnp48	93	43.963	ENSPANG00000000771	SNRNP48	92	42.722	Papio_anubis
ENSTRUG00000007031	snrnp48	98	52.571	ENSPKIG00000013703	snrnp48	53	60.081	Paramormyrops_kingsleyae
ENSTRUG00000007031	snrnp48	84	45.608	ENSPSIG00000002213	SNRNP48	63	54.680	Pelodiscus_sinensis
ENSTRUG00000007031	snrnp48	77	63.019	ENSPMGG00000008120	snrnp48	92	63.707	Periophthalmus_magnuspinnatus
ENSTRUG00000007031	snrnp48	80	49.635	ENSPEMG00000008872	Snrnp48	74	50.199	Peromyscus_maniculatus_bairdii
ENSTRUG00000007031	snrnp48	86	67.931	ENSPFOG00000003578	snrnp48	74	72.266	Poecilia_formosa
ENSTRUG00000007031	snrnp48	70	71.849	ENSPLAG00000002290	snrnp48	82	71.849	Poecilia_latipinna
ENSTRUG00000007031	snrnp48	86	67.931	ENSPMEG00000018033	snrnp48	74	72.266	Poecilia_mexicana
ENSTRUG00000007031	snrnp48	75	72.549	ENSPREG00000018541	snrnp48	95	62.805	Poecilia_reticulata
ENSTRUG00000007031	snrnp48	93	43.963	ENSPPYG00000016209	SNRNP48	92	42.722	Pongo_abelii
ENSTRUG00000007031	snrnp48	72	39.200	ENSPCAG00000011991	SNRNP48	90	38.525	Procavia_capensis
ENSTRUG00000007031	snrnp48	82	49.110	ENSPVAG00000002854	SNRNP48	73	50.400	Pteropus_vampyrus
ENSTRUG00000007031	snrnp48	92	71.019	ENSPNYG00000015399	snrnp48	81	74.510	Pundamilia_nyererei
ENSTRUG00000007031	snrnp48	92	46.386	ENSRNOG00000013756	Snrnp48	74	50.598	Rattus_norvegicus
ENSTRUG00000007031	snrnp48	82	48.227	ENSRBIG00000043856	SNRNP48	79	49.206	Rhinopithecus_bieti
ENSTRUG00000007031	snrnp48	93	43.963	ENSRROG00000043229	SNRNP48	92	42.722	Rhinopithecus_roxellana
ENSTRUG00000007031	snrnp48	93	44.272	ENSSBOG00000019486	SNRNP48	92	43.038	Saimiri_boliviensis_boliviensis
ENSTRUG00000007031	snrnp48	82	46.102	ENSSHAG00000014483	SNRNP48	72	48.031	Sarcophilus_harrisii
ENSTRUG00000007031	snrnp48	73	56.746	ENSSFOG00015006610	snrnp48	60	56.746	Scleropages_formosus
ENSTRUG00000007031	snrnp48	88	71.761	ENSSDUG00000014953	snrnp48	95	66.355	Seriola_dumerili
ENSTRUG00000007031	snrnp48	88	71.761	ENSSLDG00000005989	snrnp48	95	66.355	Seriola_lalandi_dorsalis
ENSTRUG00000007031	snrnp48	69	50.622	ENSSPUG00000006257	SNRNP48	56	54.726	Sphenodon_punctatus
ENSTRUG00000007031	snrnp48	95	71.166	ENSSPAG00000006454	snrnp48	75	75.686	Stegastes_partitus
ENSTRUG00000007031	snrnp48	85	46.622	ENSTGUG00000007575	SNRNP48	64	54.726	Taeniopygia_guttata
ENSTRUG00000007031	snrnp48	99	74.474	ENSTNIG00000012977	-	92	77.044	Tetraodon_nigroviridis
ENSTRUG00000007031	snrnp48	73	50.593	ENSTBEG00000015620	SNRNP48	72	50.000	Tupaia_belangeri
ENSTRUG00000007031	snrnp48	79	49.632	ENSTTRG00000016715	SNRNP48	73	50.794	Tursiops_truncatus
ENSTRUG00000007031	snrnp48	85	48.485	ENSUAMG00000003690	SNRNP48	73	51.200	Ursus_americanus
ENSTRUG00000007031	snrnp48	68	52.119	ENSVPAG00000003557	SNRNP48	69	54.455	Vicugna_pacos
ENSTRUG00000007031	snrnp48	82	48.084	ENSVVUG00000004996	SNRNP48	71	50.617	Vulpes_vulpes
ENSTRUG00000007031	snrnp48	88	46.078	ENSXETG00000020447	snrnp48	71	50.813	Xenopus_tropicalis
ENSTRUG00000007031	snrnp48	71	71.130	ENSXCOG00000004478	snrnp48	73	71.130	Xiphophorus_couchianus
ENSTRUG00000007031	snrnp48	77	72.137	ENSXMAG00000013595	snrnp48	74	71.875	Xiphophorus_maculatus