EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSTRUG00000007080 (Gene tree)
Gene ID: 101078825
Gene Symbol: si:ch211-117n7.8
Alias: -
Full Name: S1 RNA binding domain 1
Gene Type: protein_coding
Species: Takifugu_rubripes
Status: putative
Strand: Minus strand
Length: 29382 bases
Position: chr4:4821516-4850897
Accession: 101078825
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTRUP00000052688	S1	PF00575.23	4.8e-12	1	1
ENSTRUP00000017395	S1	PF00575.23	6.1e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTRUT00000017469	-	4393	XM_011603126	ENSTRUP00000017395	1017 (aa)	XP_011601428	H2SYA7
ENSTRUT00000049825	-	4501	-	ENSTRUP00000052688	899 (aa)	-	-

Gene Model

Click here to download ENSTRUG00000007080's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTRUG00000007080's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTRUG00000007080	si:ch211-117n7.8	96	56.032	ENSG00000068784	SRBD1	99	51.062	Homo_sapiens
ENSTRUG00000007080	si:ch211-117n7.8	97	80.612	ENSAPOG00000005103	si:ch211-117n7.8	99	74.756	Acanthochromis_polyacanthus
ENSTRUG00000007080	si:ch211-117n7.8	93	57.244	ENSAMEG00000005993	SRBD1	99	50.870	Ailuropoda_melanoleuca
ENSTRUG00000007080	si:ch211-117n7.8	98	78.231	ENSACIG00000009875	si:ch211-117n7.8	100	73.568	Amphilophus_citrinellus
ENSTRUG00000007080	si:ch211-117n7.8	97	79.455	ENSAOCG00000024718	si:ch211-117n7.8	99	74.074	Amphiprion_ocellaris
ENSTRUG00000007080	si:ch211-117n7.8	97	79.932	ENSAPEG00000002645	si:ch211-117n7.8	99	73.974	Amphiprion_percula
ENSTRUG00000007080	si:ch211-117n7.8	99	78.414	ENSATEG00000010844	si:ch211-117n7.8	99	73.807	Anabas_testudineus
ENSTRUG00000007080	si:ch211-117n7.8	95	57.816	ENSAPLG00000006313	SRBD1	99	52.354	Anas_platyrhynchos
ENSTRUG00000007080	si:ch211-117n7.8	96	55.793	ENSANAG00000025573	SRBD1	99	50.720	Aotus_nancymaae
ENSTRUG00000007080	si:ch211-117n7.8	98	81.440	ENSACLG00000024219	si:ch211-117n7.8	99	76.047	Astatotilapia_calliptera
ENSTRUG00000007080	si:ch211-117n7.8	98	67.151	ENSAMXG00000004294	SRBD1	99	61.845	Astyanax_mexicanus
ENSTRUG00000007080	si:ch211-117n7.8	92	57.647	ENSBTAG00000007508	SRBD1	99	50.000	Bos_taurus
ENSTRUG00000007080	si:ch211-117n7.8	96	56.018	ENSCJAG00000000727	SRBD1	99	50.719	Callithrix_jacchus
ENSTRUG00000007080	si:ch211-117n7.8	99	54.705	ENSCAFG00000002554	SRBD1	99	51.205	Canis_familiaris
ENSTRUG00000007080	si:ch211-117n7.8	93	58.026	ENSCAFG00020026284	SRBD1	98	57.907	Canis_lupus_dingo
ENSTRUG00000007080	si:ch211-117n7.8	92	57.765	ENSCHIG00000016535	SRBD1	98	51.205	Capra_hircus
ENSTRUG00000007080	si:ch211-117n7.8	95	56.963	ENSTSYG00000012797	SRBD1	99	51.052	Carlito_syrichta
ENSTRUG00000007080	si:ch211-117n7.8	93	57.193	ENSCPOG00000004773	SRBD1	99	51.115	Cavia_porcellus
ENSTRUG00000007080	si:ch211-117n7.8	96	55.906	ENSCCAG00000025589	SRBD1	99	50.483	Cebus_capucinus
ENSTRUG00000007080	si:ch211-117n7.8	92	57.126	ENSCATG00000039530	SRBD1	99	50.528	Cercocebus_atys
ENSTRUG00000007080	si:ch211-117n7.8	96	57.094	ENSCLAG00000008623	SRBD1	99	51.165	Chinchilla_lanigera
ENSTRUG00000007080	si:ch211-117n7.8	96	55.793	ENSCSAG00000013350	SRBD1	99	50.432	Chlorocebus_sabaeus
ENSTRUG00000007080	si:ch211-117n7.8	85	74.419	ENSCHOG00000003805	SRBD1	74	76.190	Choloepus_hoffmanni
ENSTRUG00000007080	si:ch211-117n7.8	95	57.503	ENSCPBG00000005677	SRBD1	99	51.576	Chrysemys_picta_bellii
ENSTRUG00000007080	si:ch211-117n7.8	87	40.926	ENSCING00000005950	-	99	40.926	Ciona_intestinalis
ENSTRUG00000007080	si:ch211-117n7.8	87	42.712	ENSCSAVG00000000861	-	99	42.712	Ciona_savignyi
ENSTRUG00000007080	si:ch211-117n7.8	96	55.456	ENSCANG00000016307	SRBD1	99	50.000	Colobus_angolensis_palliatus
ENSTRUG00000007080	si:ch211-117n7.8	93	57.464	ENSCGRG00001000513	Srbd1	99	50.484	Cricetulus_griseus_chok1gshd
ENSTRUG00000007080	si:ch211-117n7.8	93	57.464	ENSCGRG00000002283	Srbd1	99	50.484	Cricetulus_griseus_crigri
ENSTRUG00000007080	si:ch211-117n7.8	99	73.631	ENSCSEG00000000856	si:ch211-117n7.8	99	67.739	Cynoglossus_semilaevis
ENSTRUG00000007080	si:ch211-117n7.8	96	78.862	ENSCVAG00000020212	si:ch211-117n7.8	94	77.401	Cyprinodon_variegatus
ENSTRUG00000007080	si:ch211-117n7.8	93	56.674	ENSDNOG00000018686	SRBD1	83	56.557	Dasypus_novemcinctus
ENSTRUG00000007080	si:ch211-117n7.8	92	58.134	ENSDORG00000010468	Srbd1	83	57.775	Dipodomys_ordii
ENSTRUG00000007080	si:ch211-117n7.8	87	36.076	FBgn0051156	CG31156	79	36.076	Drosophila_melanogaster
ENSTRUG00000007080	si:ch211-117n7.8	88	56.934	ENSETEG00000000739	SRBD1	92	56.934	Echinops_telfairi
ENSTRUG00000007080	si:ch211-117n7.8	80	48.560	ENSEBUG00000008902	si:ch211-117n7.8	95	48.209	Eptatretus_burgeri
ENSTRUG00000007080	si:ch211-117n7.8	98	53.025	ENSEASG00005003132	SRBD1	98	56.107	Equus_asinus_asinus
ENSTRUG00000007080	si:ch211-117n7.8	98	55.286	ENSECAG00000013865	SRBD1	98	50.820	Equus_caballus
ENSTRUG00000007080	si:ch211-117n7.8	96	70.328	ENSELUG00000012592	si:ch211-117n7.8	100	62.938	Esox_lucius
ENSTRUG00000007080	si:ch211-117n7.8	93	57.227	ENSFCAG00000005101	SRBD1	99	51.154	Felis_catus
ENSTRUG00000007080	si:ch211-117n7.8	94	56.741	ENSFALG00000012966	SRBD1	99	50.193	Ficedula_albicollis
ENSTRUG00000007080	si:ch211-117n7.8	96	57.159	ENSFDAG00000016670	SRBD1	99	52.252	Fukomys_damarensis
ENSTRUG00000007080	si:ch211-117n7.8	99	77.740	ENSFHEG00000019480	si:ch211-117n7.8	99	72.957	Fundulus_heteroclitus
ENSTRUG00000007080	si:ch211-117n7.8	55	68.884	ENSGMOG00000018010	-	100	68.884	Gadus_morhua
ENSTRUG00000007080	si:ch211-117n7.8	99	51.981	ENSGALG00000009990	SRBD1	99	51.591	Gallus_gallus
ENSTRUG00000007080	si:ch211-117n7.8	99	78.587	ENSGAFG00000019664	si:ch211-117n7.8	99	73.171	Gambusia_affinis
ENSTRUG00000007080	si:ch211-117n7.8	69	78.037	ENSGACG00000010794	si:ch211-117n7.8	100	78.037	Gasterosteus_aculeatus
ENSTRUG00000007080	si:ch211-117n7.8	98	54.951	ENSGAGG00000006166	SRBD1	99	58.019	Gopherus_agassizii
ENSTRUG00000007080	si:ch211-117n7.8	93	56.876	ENSGGOG00000005910	SRBD1	99	51.482	Gorilla_gorilla
ENSTRUG00000007080	si:ch211-117n7.8	98	66.186	ENSHBUG00000013207	si:ch211-117n7.8	99	62.747	Haplochromis_burtoni
ENSTRUG00000007080	si:ch211-117n7.8	96	56.899	ENSHGLG00000018153	-	99	51.357	Heterocephalus_glaber_female
ENSTRUG00000007080	si:ch211-117n7.8	96	57.013	ENSHGLG00100015183	-	99	51.357	Heterocephalus_glaber_male
ENSTRUG00000007080	si:ch211-117n7.8	98	66.704	ENSIPUG00000009661	srbd1	99	61.591	Ictalurus_punctatus
ENSTRUG00000007080	si:ch211-117n7.8	99	51.562	ENSSTOG00000005898	SRBD1	99	51.562	Ictidomys_tridecemlineatus
ENSTRUG00000007080	si:ch211-117n7.8	99	49.324	ENSJJAG00000022244	Srbd1	99	49.179	Jaculus_jaculus
ENSTRUG00000007080	si:ch211-117n7.8	99	80.179	ENSKMAG00000003473	si:ch211-117n7.8	100	74.805	Kryptolebias_marmoratus
ENSTRUG00000007080	si:ch211-117n7.8	99	77.384	ENSLBEG00000027518	si:ch211-117n7.8	99	73.756	Labrus_bergylta
ENSTRUG00000007080	si:ch211-117n7.8	94	57.159	ENSLACG00000009790	SRBD1	99	56.813	Latimeria_chalumnae
ENSTRUG00000007080	si:ch211-117n7.8	94	66.472	ENSLOCG00000016360	si:ch211-117n7.8	97	59.921	Lepisosteus_oculatus
ENSTRUG00000007080	si:ch211-117n7.8	96	55.681	ENSMFAG00000042026	SRBD1	99	50.336	Macaca_fascicularis
ENSTRUG00000007080	si:ch211-117n7.8	96	55.681	ENSMMUG00000003490	SRBD1	99	50.240	Macaca_mulatta
ENSTRUG00000007080	si:ch211-117n7.8	96	54.218	ENSMNEG00000034701	SRBD1	99	49.183	Macaca_nemestrina
ENSTRUG00000007080	si:ch211-117n7.8	96	55.793	ENSMLEG00000000745	SRBD1	99	50.528	Mandrillus_leucophaeus
ENSTRUG00000007080	si:ch211-117n7.8	98	79.369	ENSMAMG00000021921	si:ch211-117n7.8	100	74.074	Mastacembelus_armatus
ENSTRUG00000007080	si:ch211-117n7.8	98	81.440	ENSMZEG00005027369	si:ch211-117n7.8	99	76.047	Maylandia_zebra
ENSTRUG00000007080	si:ch211-117n7.8	88	57.020	ENSMGAG00000010273	SRBD1	99	56.527	Meleagris_gallopavo
ENSTRUG00000007080	si:ch211-117n7.8	86	56.597	ENSMAUG00000013916	Srbd1	95	55.966	Mesocricetus_auratus
ENSTRUG00000007080	si:ch211-117n7.8	93	57.647	ENSMICG00000007835	SRBD1	99	51.060	Microcebus_murinus
ENSTRUG00000007080	si:ch211-117n7.8	99	51.018	ENSMOCG00000018716	Srbd1	99	50.726	Microtus_ochrogaster
ENSTRUG00000007080	si:ch211-117n7.8	99	78.309	ENSMMOG00000007507	si:ch211-117n7.8	100	74.040	Mola_mola
ENSTRUG00000007080	si:ch211-117n7.8	98	79.481	ENSMALG00000001562	si:ch211-117n7.8	99	75.367	Monopterus_albus
ENSTRUG00000007080	si:ch211-117n7.8	93	56.890	MGP_CAROLIEiJ_G0021934	Srbd1	99	56.908	Mus_caroli
ENSTRUG00000007080	si:ch211-117n7.8	93	56.773	ENSMUSG00000024135	Srbd1	98	53.597	Mus_musculus
ENSTRUG00000007080	si:ch211-117n7.8	93	57.059	MGP_PahariEiJ_G0020924	Srbd1	97	52.148	Mus_pahari
ENSTRUG00000007080	si:ch211-117n7.8	93	56.773	MGP_SPRETEiJ_G0022850	Srbd1	97	51.889	Mus_spretus
ENSTRUG00000007080	si:ch211-117n7.8	98	55.580	ENSMLUG00000007039	SRBD1	99	51.096	Myotis_lucifugus
ENSTRUG00000007080	si:ch211-117n7.8	99	49.250	ENSNGAG00000011893	Srbd1	99	48.831	Nannospalax_galili
ENSTRUG00000007080	si:ch211-117n7.8	98	77.840	ENSNBRG00000012873	si:ch211-117n7.8	100	73.088	Neolamprologus_brichardi
ENSTRUG00000007080	si:ch211-117n7.8	96	55.806	ENSNLEG00000016877	SRBD1	99	50.772	Nomascus_leucogenys
ENSTRUG00000007080	si:ch211-117n7.8	93	56.840	ENSODEG00000012095	SRBD1	86	56.722	Octodon_degus
ENSTRUG00000007080	si:ch211-117n7.8	98	81.777	ENSONIG00000000945	si:ch211-117n7.8	100	81.294	Oreochromis_niloticus
ENSTRUG00000007080	si:ch211-117n7.8	93	57.227	ENSOCUG00000015385	SRBD1	99	51.156	Oryctolagus_cuniculus
ENSTRUG00000007080	si:ch211-117n7.8	98	73.077	ENSORLG00000004427	si:ch211-117n7.8	100	67.476	Oryzias_latipes
ENSTRUG00000007080	si:ch211-117n7.8	98	76.384	ENSORLG00020012792	si:ch211-117n7.8	99	70.417	Oryzias_latipes_hni
ENSTRUG00000007080	si:ch211-117n7.8	98	76.357	ENSORLG00015018598	si:ch211-117n7.8	99	70.388	Oryzias_latipes_hsok
ENSTRUG00000007080	si:ch211-117n7.8	97	74.289	ENSOMEG00000012229	si:ch211-117n7.8	99	72.692	Oryzias_melastigma
ENSTRUG00000007080	si:ch211-117n7.8	92	55.647	ENSOGAG00000001076	SRBD1	84	55.765	Otolemur_garnettii
ENSTRUG00000007080	si:ch211-117n7.8	92	53.785	ENSOARG00000005958	SRBD1	99	48.414	Ovis_aries
ENSTRUG00000007080	si:ch211-117n7.8	93	56.674	ENSPPAG00000038442	SRBD1	99	50.772	Pan_paniscus
ENSTRUG00000007080	si:ch211-117n7.8	93	57.176	ENSPPRG00000003449	SRBD1	99	51.154	Panthera_pardus
ENSTRUG00000007080	si:ch211-117n7.8	93	57.176	ENSPTIG00000012495	SRBD1	99	51.011	Panthera_tigris_altaica
ENSTRUG00000007080	si:ch211-117n7.8	93	56.909	ENSPTRG00000011889	SRBD1	99	50.772	Pan_troglodytes
ENSTRUG00000007080	si:ch211-117n7.8	96	55.681	ENSPANG00000008063	SRBD1	99	50.432	Papio_anubis
ENSTRUG00000007080	si:ch211-117n7.8	99	63.795	ENSPKIG00000021973	si:ch211-117n7.8	99	59.570	Paramormyrops_kingsleyae
ENSTRUG00000007080	si:ch211-117n7.8	94	57.242	ENSPSIG00000008992	SRBD1	99	51.054	Pelodiscus_sinensis
ENSTRUG00000007080	si:ch211-117n7.8	95	75.906	ENSPMGG00000013348	si:ch211-117n7.8	99	68.862	Periophthalmus_magnuspinnatus
ENSTRUG00000007080	si:ch211-117n7.8	99	49.719	ENSPEMG00000020684	Srbd1	99	49.391	Peromyscus_maniculatus_bairdii
ENSTRUG00000007080	si:ch211-117n7.8	99	79.260	ENSPFOG00000010650	si:ch211-117n7.8	99	73.854	Poecilia_formosa
ENSTRUG00000007080	si:ch211-117n7.8	99	79.372	ENSPLAG00000002141	si:ch211-117n7.8	99	73.951	Poecilia_latipinna
ENSTRUG00000007080	si:ch211-117n7.8	99	79.372	ENSPMEG00000018537	si:ch211-117n7.8	99	73.951	Poecilia_mexicana
ENSTRUG00000007080	si:ch211-117n7.8	94	79.697	ENSPREG00000003258	si:ch211-117n7.8	99	71.637	Poecilia_reticulata
ENSTRUG00000007080	si:ch211-117n7.8	96	50.053	ENSPPYG00000012444	SRBD1	99	45.943	Pongo_abelii
ENSTRUG00000007080	si:ch211-117n7.8	84	51.974	ENSPCAG00000005629	SRBD1	80	51.309	Procavia_capensis
ENSTRUG00000007080	si:ch211-117n7.8	95	47.777	ENSPCOG00000017669	SRBD1	99	43.570	Propithecus_coquereli
ENSTRUG00000007080	si:ch211-117n7.8	92	50.177	ENSPVAG00000001782	SRBD1	84	49.941	Pteropus_vampyrus
ENSTRUG00000007080	si:ch211-117n7.8	98	74.775	ENSPNYG00000000508	si:ch211-117n7.8	100	70.441	Pundamilia_nyererei
ENSTRUG00000007080	si:ch211-117n7.8	96	69.521	ENSPNAG00000013492	SRBD1	99	62.391	Pygocentrus_nattereri
ENSTRUG00000007080	si:ch211-117n7.8	92	55.781	ENSRNOG00000014720	Srbd1	97	50.842	Rattus_norvegicus
ENSTRUG00000007080	si:ch211-117n7.8	96	55.118	ENSRBIG00000033486	SRBD1	99	49.856	Rhinopithecus_bieti
ENSTRUG00000007080	si:ch211-117n7.8	96	55.118	ENSRROG00000041599	SRBD1	99	49.856	Rhinopithecus_roxellana
ENSTRUG00000007080	si:ch211-117n7.8	96	55.906	ENSSBOG00000024982	SRBD1	99	50.575	Saimiri_boliviensis_boliviensis
ENSTRUG00000007080	si:ch211-117n7.8	96	66.397	ENSSFOG00015001128	si:ch211-117n7.8	94	66.397	Scleropages_formosus
ENSTRUG00000007080	si:ch211-117n7.8	99	78.627	ENSSMAG00000018256	si:ch211-117n7.8	100	74.439	Scophthalmus_maximus
ENSTRUG00000007080	si:ch211-117n7.8	100	78.228	ENSSLDG00000023189	si:ch211-117n7.8	99	74.580	Seriola_lalandi_dorsalis
ENSTRUG00000007080	si:ch211-117n7.8	99	50.163	ENSSARG00000009740	SRBD1	93	49.728	Sorex_araneus
ENSTRUG00000007080	si:ch211-117n7.8	94	58.706	ENSSPUG00000010475	SRBD1	94	58.235	Sphenodon_punctatus
ENSTRUG00000007080	si:ch211-117n7.8	97	77.324	ENSSPAG00000008092	-	99	71.782	Stegastes_partitus
ENSTRUG00000007080	si:ch211-117n7.8	95	56.636	ENSSSCG00000008445	SRBD1	98	50.962	Sus_scrofa
ENSTRUG00000007080	si:ch211-117n7.8	92	57.479	ENSTGUG00000003878	SRBD1	100	57.479	Taeniopygia_guttata
ENSTRUG00000007080	si:ch211-117n7.8	99	82.096	ENSTNIG00000007464	si:ch211-117n7.8	98	79.941	Tetraodon_nigroviridis
ENSTRUG00000007080	si:ch211-117n7.8	74	80.851	ENSTBEG00000004556	SRBD1	77	80.851	Tupaia_belangeri
ENSTRUG00000007080	si:ch211-117n7.8	85	58.566	ENSTTRG00000011871	SRBD1	89	60.000	Tursiops_truncatus
ENSTRUG00000007080	si:ch211-117n7.8	93	57.344	ENSUAMG00000008126	SRBD1	97	53.986	Ursus_americanus
ENSTRUG00000007080	si:ch211-117n7.8	93	57.344	ENSUMAG00000012902	SRBD1	98	50.965	Ursus_maritimus
ENSTRUG00000007080	si:ch211-117n7.8	98	54.956	ENSVPAG00000006825	SRBD1	97	54.626	Vicugna_pacos
ENSTRUG00000007080	si:ch211-117n7.8	98	54.978	ENSVVUG00000005389	SRBD1	99	50.674	Vulpes_vulpes
ENSTRUG00000007080	si:ch211-117n7.8	96	46.746	ENSXETG00000002760	srbd1	99	44.249	Xenopus_tropicalis
ENSTRUG00000007080	si:ch211-117n7.8	99	78.924	ENSXMAG00000016861	si:ch211-117n7.8	99	73.756	Xiphophorus_maculatus