EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSTRUG00000007248 (Gene tree)
Gene ID: 101076133
Gene Symbol: cnot3b
Alias: cnot3|wu:fi20g07|zgc:55934
Full Name: CCR4-NOT transcription complex subunit 3-like
Gene Type: protein_coding
Species: Takifugu_rubripes
Status: putative
Strand: Plus strand
Length: 15695 bases
Position: chr12:6463577-6479271
Accession: 101076133
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTRUP00000017869	Not3	PF04065.15	2.4e-95	1	1
ENSTRUP00000017869	NOT2_3_5	PF04153.18	1.1e-39	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTRUT00000017943	-	5523	XM_011609143	ENSTRUP00000017869	1011 (aa)	XP_011607445	H2SZN1

Gene Model

Click here to download ENSTRUG00000007248's gene model file

Pathways

Pathway ID	Pathway Name	Source
tru03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSTRUG00000007248's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTRUG00000007248	cnot3b	62	92.434	ENSG00000088038	CNOT3	100	93.814	Homo_sapiens
ENSTRUG00000007248	cnot3b	56	94.709	ENSAPOG00000015002	cnot3b	89	94.709	Acanthochromis_polyacanthus
ENSTRUG00000007248	cnot3b	64	92.763	ENSAMEG00000004528	CNOT3	73	92.459	Ailuropoda_melanoleuca
ENSTRUG00000007248	cnot3b	60	94.180	ENSACIG00000003652	cnot3b	90	92.411	Amphilophus_citrinellus
ENSTRUG00000007248	cnot3b	88	94.709	ENSAOCG00000018385	-	100	94.709	Amphiprion_ocellaris
ENSTRUG00000007248	cnot3b	89	94.709	ENSAPEG00000002640	cnot3b	100	94.709	Amphiprion_percula
ENSTRUG00000007248	cnot3b	91	87.634	ENSATEG00000022737	cnot3a	99	87.634	Anabas_testudineus
ENSTRUG00000007248	cnot3b	91	90.256	ENSATEG00000015777	cnot3b	82	81.684	Anabas_testudineus
ENSTRUG00000007248	cnot3b	56	86.096	ENSACAG00000016085	CNOT3	69	91.776	Anolis_carolinensis
ENSTRUG00000007248	cnot3b	62	92.434	ENSANAG00000025756	CNOT3	69	92.131	Aotus_nancymaae
ENSTRUG00000007248	cnot3b	91	92.670	ENSACLG00000016702	cnot3b	100	76.738	Astatotilapia_calliptera
ENSTRUG00000007248	cnot3b	67	89.785	ENSAMXG00000009447	cnot3b	98	88.832	Astyanax_mexicanus
ENSTRUG00000007248	cnot3b	62	92.434	ENSCJAG00000001094	CNOT3	74	89.516	Callithrix_jacchus
ENSTRUG00000007248	cnot3b	62	92.434	ENSCAFG00000002699	CNOT3	73	92.131	Canis_familiaris
ENSTRUG00000007248	cnot3b	62	92.434	ENSCAFG00020018359	CNOT3	73	92.131	Canis_lupus_dingo
ENSTRUG00000007248	cnot3b	62	90.429	ENSCHIG00000015302	CNOT3	68	90.132	Capra_hircus
ENSTRUG00000007248	cnot3b	62	92.434	ENSTSYG00000008058	CNOT3	73	92.131	Carlito_syrichta
ENSTRUG00000007248	cnot3b	72	84.264	ENSCAPG00000009533	CNOT3	84	92.131	Cavia_aperea
ENSTRUG00000007248	cnot3b	72	83.714	ENSCPOG00000020741	CNOT3	73	92.131	Cavia_porcellus
ENSTRUG00000007248	cnot3b	62	92.434	ENSCCAG00000036290	CNOT3	89	92.131	Cebus_capucinus
ENSTRUG00000007248	cnot3b	62	92.434	ENSCATG00000030324	CNOT3	73	92.131	Cercocebus_atys
ENSTRUG00000007248	cnot3b	70	83.417	ENSCLAG00000003302	CNOT3	100	86.585	Chinchilla_lanigera
ENSTRUG00000007248	cnot3b	62	92.434	ENSCSAG00000001900	CNOT3	73	92.131	Chlorocebus_sabaeus
ENSTRUG00000007248	cnot3b	57	80.488	ENSCING00000000293	-	59	80.488	Ciona_intestinalis
ENSTRUG00000007248	cnot3b	62	92.434	ENSCANG00000013408	CNOT3	73	92.131	Colobus_angolensis_palliatus
ENSTRUG00000007248	cnot3b	50	92.105	ENSCGRG00001000855	Cnot3	67	91.803	Cricetulus_griseus_chok1gshd
ENSTRUG00000007248	cnot3b	90	92.442	ENSCSEG00000016892	cnot3b	99	92.442	Cynoglossus_semilaevis
ENSTRUG00000007248	cnot3b	91	91.099	ENSCVAG00000022122	cnot3b	100	90.625	Cyprinodon_variegatus
ENSTRUG00000007248	cnot3b	91	85.106	ENSDARG00000007135	cnot3a	99	86.813	Danio_rerio
ENSTRUG00000007248	cnot3b	92	88.325	ENSDARG00000019842	cnot3b	100	88.325	Danio_rerio
ENSTRUG00000007248	cnot3b	61	92.105	ENSDNOG00000045972	CNOT3	85	91.803	Dasypus_novemcinctus
ENSTRUG00000007248	cnot3b	63	92.434	ENSDORG00000008021	Cnot3	100	81.609	Dipodomys_ordii
ENSTRUG00000007248	cnot3b	62	92.434	ENSEASG00005021591	CNOT3	73	92.131	Equus_asinus_asinus
ENSTRUG00000007248	cnot3b	62	92.434	ENSECAG00000023181	CNOT3	73	92.131	Equus_caballus
ENSTRUG00000007248	cnot3b	89	94.578	ENSELUG00000014743	cnot3a	99	89.785	Esox_lucius
ENSTRUG00000007248	cnot3b	70	83.668	ENSFCAG00000014042	CNOT3	73	92.131	Felis_catus
ENSTRUG00000007248	cnot3b	61	91.880	ENSFHEG00000023166	cnot3a	96	91.880	Fundulus_heteroclitus
ENSTRUG00000007248	cnot3b	91	91.099	ENSGAFG00000003459	cnot3b	91	88.971	Gambusia_affinis
ENSTRUG00000007248	cnot3b	62	88.971	ENSGACG00000009395	cnot3b	86	88.971	Gasterosteus_aculeatus
ENSTRUG00000007248	cnot3b	58	82.323	ENSGAGG00000012677	CNOT3	68	90.459	Gopherus_agassizii
ENSTRUG00000007248	cnot3b	62	92.434	ENSGGOG00000012996	CNOT3	76	92.131	Gorilla_gorilla
ENSTRUG00000007248	cnot3b	91	93.194	ENSHBUG00000019699	cnot3b	99	93.194	Haplochromis_burtoni
ENSTRUG00000007248	cnot3b	50	92.434	ENSHGLG00000008821	CNOT3	100	81.609	Heterocephalus_glaber_female
ENSTRUG00000007248	cnot3b	89	85.455	ENSIPUG00000000167	cnot3	99	80.645	Ictalurus_punctatus
ENSTRUG00000007248	cnot3b	100	59.158	ENSIPUG00000009046	cnot3b	96	90.323	Ictalurus_punctatus
ENSTRUG00000007248	cnot3b	62	92.434	ENSSTOG00000028248	CNOT3	85	92.131	Ictidomys_tridecemlineatus
ENSTRUG00000007248	cnot3b	63	92.105	ENSJJAG00000014594	Cnot3	100	81.609	Jaculus_jaculus
ENSTRUG00000007248	cnot3b	67	92.169	ENSKMAG00000004863	cnot3a	86	81.188	Kryptolebias_marmoratus
ENSTRUG00000007248	cnot3b	88	93.082	ENSLBEG00000018278	cnot3b	99	93.082	Labrus_bergylta
ENSTRUG00000007248	cnot3b	66	92.105	ENSLACG00000009742	CNOT3	88	91.803	Latimeria_chalumnae
ENSTRUG00000007248	cnot3b	62	91.475	ENSLAFG00000022133	CNOT3	72	91.176	Loxodonta_africana
ENSTRUG00000007248	cnot3b	62	92.434	ENSMFAG00000040073	CNOT3	73	92.131	Macaca_fascicularis
ENSTRUG00000007248	cnot3b	55	92.017	ENSMMUG00000009698	CNOT3	100	99.020	Macaca_mulatta
ENSTRUG00000007248	cnot3b	62	92.434	ENSMNEG00000036750	CNOT3	73	92.131	Macaca_nemestrina
ENSTRUG00000007248	cnot3b	62	92.434	ENSMLEG00000036579	CNOT3	72	92.131	Mandrillus_leucophaeus
ENSTRUG00000007248	cnot3b	94	80.723	ENSMAMG00000019357	cnot3b	80	80.187	Mastacembelus_armatus
ENSTRUG00000007248	cnot3b	91	92.670	ENSMZEG00005002466	cnot3b	80	77.315	Maylandia_zebra
ENSTRUG00000007248	cnot3b	50	92.105	ENSMAUG00000014996	Cnot3	67	91.803	Mesocricetus_auratus
ENSTRUG00000007248	cnot3b	64	87.500	ENSMICG00000002370	CNOT3	73	92.131	Microcebus_murinus
ENSTRUG00000007248	cnot3b	63	93.651	ENSMMOG00000013086	cnot3b	100	92.670	Mola_mola
ENSTRUG00000007248	cnot3b	50	84.868	ENSMMOG00000016446	cnot3a	99	89.247	Mola_mola
ENSTRUG00000007248	cnot3b	55	92.434	ENSMODG00000004066	CNOT3	74	92.131	Monodelphis_domestica
ENSTRUG00000007248	cnot3b	63	94.180	ENSMALG00000004936	cnot3b	88	93.194	Monopterus_albus
ENSTRUG00000007248	cnot3b	91	89.247	ENSMALG00000009204	cnot3a	99	89.247	Monopterus_albus
ENSTRUG00000007248	cnot3b	59	92.169	MGP_CAROLIEiJ_G0029095	Cnot3	100	94.000	Mus_caroli
ENSTRUG00000007248	cnot3b	65	92.169	ENSMUSG00000035632	Cnot3	100	94.000	Mus_musculus
ENSTRUG00000007248	cnot3b	59	92.169	MGP_PahariEiJ_G0020964	Cnot3	100	94.000	Mus_pahari
ENSTRUG00000007248	cnot3b	65	92.169	MGP_SPRETEiJ_G0030148	Cnot3	100	94.000	Mus_spretus
ENSTRUG00000007248	cnot3b	62	92.434	ENSMPUG00000010352	CNOT3	85	92.131	Mustela_putorius_furo
ENSTRUG00000007248	cnot3b	50	92.434	ENSNGAG00000013266	Cnot3	67	92.131	Nannospalax_galili
ENSTRUG00000007248	cnot3b	82	93.651	ENSNBRG00000003336	cnot3b	99	93.651	Neolamprologus_brichardi
ENSTRUG00000007248	cnot3b	66	92.434	ENSODEG00000000705	CNOT3	100	89.873	Octodon_degus
ENSTRUG00000007248	cnot3b	91	93.194	ENSONIG00000007047	cnot3b	100	92.708	Oreochromis_niloticus
ENSTRUG00000007248	cnot3b	54	84.638	ENSOCUG00000007691	CNOT3	67	92.131	Oryctolagus_cuniculus
ENSTRUG00000007248	cnot3b	91	90.722	ENSORLG00000005982	cnot3b	77	70.516	Oryzias_latipes
ENSTRUG00000007248	cnot3b	91	90.722	ENSORLG00020005779	cnot3b	79	74.014	Oryzias_latipes_hni
ENSTRUG00000007248	cnot3b	91	90.722	ENSORLG00015019021	cnot3b	80	73.948	Oryzias_latipes_hsok
ENSTRUG00000007248	cnot3b	91	90.206	ENSOMEG00000015557	cnot3b	100	74.902	Oryzias_melastigma
ENSTRUG00000007248	cnot3b	70	83.417	ENSOGAG00000006945	CNOT3	85	92.131	Otolemur_garnettii
ENSTRUG00000007248	cnot3b	62	92.434	ENSPPAG00000002748	CNOT3	76	92.131	Pan_paniscus
ENSTRUG00000007248	cnot3b	70	83.668	ENSPPRG00000011705	CNOT3	73	92.131	Panthera_pardus
ENSTRUG00000007248	cnot3b	55	92.617	ENSPTIG00000008781	CNOT3	92	92.617	Panthera_tigris_altaica
ENSTRUG00000007248	cnot3b	62	92.434	ENSPTRG00000011444	CNOT3	76	92.131	Pan_troglodytes
ENSTRUG00000007248	cnot3b	62	92.434	ENSPTRG00000046717	-	76	92.131	Pan_troglodytes
ENSTRUG00000007248	cnot3b	62	92.434	ENSPANG00000009375	CNOT3	73	92.131	Papio_anubis
ENSTRUG00000007248	cnot3b	89	94.578	ENSPKIG00000011733	CNOT3	75	85.976	Paramormyrops_kingsleyae
ENSTRUG00000007248	cnot3b	87	90.909	ENSPKIG00000015967	-	99	94.872	Paramormyrops_kingsleyae
ENSTRUG00000007248	cnot3b	89	86.911	ENSPMGG00000022539	cnot3b	99	86.911	Periophthalmus_magnuspinnatus
ENSTRUG00000007248	cnot3b	71	92.105	ENSPEMG00000024185	Cnot3	97	91.803	Peromyscus_maniculatus_bairdii
ENSTRUG00000007248	cnot3b	62	92.105	ENSPCIG00000023018	CNOT3	89	91.803	Phascolarctos_cinereus
ENSTRUG00000007248	cnot3b	74	88.770	ENSPFOG00000008693	cnot3a	98	88.770	Poecilia_formosa
ENSTRUG00000007248	cnot3b	91	91.099	ENSPLAG00000013457	cnot3b	96	89.308	Poecilia_latipinna
ENSTRUG00000007248	cnot3b	91	91.623	ENSPMEG00000010184	cnot3b	97	89.937	Poecilia_mexicana
ENSTRUG00000007248	cnot3b	88	89.308	ENSPREG00000000662	cnot3b	97	89.308	Poecilia_reticulata
ENSTRUG00000007248	cnot3b	60	91.064	ENSPREG00000007592	cnot3a	100	88.770	Poecilia_reticulata
ENSTRUG00000007248	cnot3b	62	92.105	ENSPPYG00000010372	CNOT3	73	91.803	Pongo_abelii
ENSTRUG00000007248	cnot3b	61	85.546	ENSPCOG00000017673	CNOT3	75	92.131	Propithecus_coquereli
ENSTRUG00000007248	cnot3b	62	91.447	ENSPVAG00000015564	CNOT3	70	91.148	Pteropus_vampyrus
ENSTRUG00000007248	cnot3b	91	80.952	ENSPNYG00000003358	cnot3b	99	80.105	Pundamilia_nyererei
ENSTRUG00000007248	cnot3b	63	90.361	ENSPNAG00000017679	cnot3a	99	85.484	Pygocentrus_nattereri
ENSTRUG00000007248	cnot3b	89	96.386	ENSPNAG00000027459	cnot3b	100	89.175	Pygocentrus_nattereri
ENSTRUG00000007248	cnot3b	59	92.169	ENSRNOG00000053234	Cnot3	73	91.803	Rattus_norvegicus
ENSTRUG00000007248	cnot3b	62	92.434	ENSRBIG00000031025	CNOT3	73	92.131	Rhinopithecus_bieti
ENSTRUG00000007248	cnot3b	62	92.434	ENSRROG00000003872	CNOT3	73	92.131	Rhinopithecus_roxellana
ENSTRUG00000007248	cnot3b	62	92.434	ENSSBOG00000030268	CNOT3	69	92.131	Saimiri_boliviensis_boliviensis
ENSTRUG00000007248	cnot3b	91	91.935	ENSSFOG00015000248	cnot3	99	91.935	Scleropages_formosus
ENSTRUG00000007248	cnot3b	91	91.398	ENSSFOG00015019203	-	99	91.398	Scleropages_formosus
ENSTRUG00000007248	cnot3b	72	80.481	ENSSMAG00000016031	cnot3b	80	81.417	Scophthalmus_maximus
ENSTRUG00000007248	cnot3b	91	93.717	ENSSDUG00000003428	cnot3b	80	82.800	Seriola_dumerili
ENSTRUG00000007248	cnot3b	73	91.880	ENSSDUG00000008181	cnot3a	99	88.710	Seriola_dumerili
ENSTRUG00000007248	cnot3b	91	93.717	ENSSLDG00000014376	cnot3b	80	82.933	Seriola_lalandi_dorsalis
ENSTRUG00000007248	cnot3b	56	87.097	ENSSPUG00000008510	CNOT3	68	92.131	Sphenodon_punctatus
ENSTRUG00000007248	cnot3b	91	93.717	ENSSPAG00000001429	cnot3b	100	93.229	Stegastes_partitus
ENSTRUG00000007248	cnot3b	75	88.281	ENSSPAG00000003858	cnot3a	98	85.065	Stegastes_partitus
ENSTRUG00000007248	cnot3b	62	92.434	ENSSSCG00000003264	CNOT3	67	92.131	Sus_scrofa
ENSTRUG00000007248	cnot3b	85	84.211	ENSTNIG00000008082	cnot3a	99	84.211	Tetraodon_nigroviridis
ENSTRUG00000007248	cnot3b	90	88.372	ENSTNIG00000005663	cnot3b	100	91.712	Tetraodon_nigroviridis
ENSTRUG00000007248	cnot3b	64	92.763	ENSUAMG00000005234	CNOT3	73	92.459	Ursus_americanus
ENSTRUG00000007248	cnot3b	54	91.039	ENSUMAG00000010934	CNOT3	85	92.437	Ursus_maritimus
ENSTRUG00000007248	cnot3b	62	92.434	ENSVVUG00000008239	CNOT3	71	92.131	Vulpes_vulpes
ENSTRUG00000007248	cnot3b	50	89.869	ENSXETG00000003166	cnot3	70	89.320	Xenopus_tropicalis
ENSTRUG00000007248	cnot3b	88	89.937	ENSXCOG00000018976	cnot3b	99	89.937	Xiphophorus_couchianus
ENSTRUG00000007248	cnot3b	67	89.305	ENSXCOG00000019460	cnot3a	97	91.453	Xiphophorus_couchianus