EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSTRUG00000007303 (Gene tree)
Gene ID: 101077267
Gene Symbol: ercc2
Alias: XPD|zgc:56365
Full Name: ERCC excision repair 2%2C TFIIH core complex helicase subunit
Gene Type: protein_coding
Species: Takifugu_rubripes
Status: putative
Strand: Minus strand
Length: 5898 bases
Position: chr11:9673109-9679006
Accession: 101077267
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTRUP00000018001	ResIII	PF04851.15	1.7e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTRUT00000052069	-	2924	-	ENSTRUP00000050221	798 (aa)	-	-
ENSTRUT00000018075	-	2046	-	ENSTRUP00000018001	681 (aa)	-	H2T013
ENSTRUT00000018074	-	2427	XM_003968697	ENSTRUP00000018000	760 (aa)	XP_003968746	H2T012

Gene Model

Click here to download ENSTRUG00000007303's gene model file

Pathways

Pathway ID	Pathway Name	Source
tru03022	Basal transcription factors	KEGG
tru03420	Nucleotide excision repair	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSTRUG00000007303's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTRUG00000007303	ercc2	99	83.947	ENSG00000104884	ERCC2	99	83.947	Homo_sapiens
ENSTRUG00000007303	ercc2	98	94.880	ENSAPOG00000000375	ercc2	100	94.880	Acanthochromis_polyacanthus
ENSTRUG00000007303	ercc2	100	94.860	ENSACIG00000008002	ercc2	100	94.860	Amphilophus_citrinellus
ENSTRUG00000007303	ercc2	98	92.954	ENSAOCG00000016153	ercc2	100	92.954	Amphiprion_ocellaris
ENSTRUG00000007303	ercc2	98	93.103	ENSAPEG00000016712	ercc2	100	93.103	Amphiprion_percula
ENSTRUG00000007303	ercc2	99	94.853	ENSATEG00000005268	ercc2	99	94.853	Anabas_testudineus
ENSTRUG00000007303	ercc2	99	83.800	ENSANAG00000022694	ERCC2	99	83.800	Aotus_nancymaae
ENSTRUG00000007303	ercc2	98	95.181	ENSACLG00000017573	ercc2	100	95.181	Astatotilapia_calliptera
ENSTRUG00000007303	ercc2	98	93.675	ENSAMXG00000009052	ercc2	99	93.675	Astyanax_mexicanus
ENSTRUG00000007303	ercc2	99	84.094	ENSCJAG00000012716	ERCC2	99	84.094	Callithrix_jacchus
ENSTRUG00000007303	ercc2	99	84.559	ENSCAFG00020011390	ERCC2	99	84.559	Canis_lupus_dingo
ENSTRUG00000007303	ercc2	97	68.684	ENSTSYG00000026723	ERCC2	98	68.684	Carlito_syrichta
ENSTRUG00000007303	ercc2	99	82.018	ENSCCAG00000019831	ERCC2	99	82.018	Cebus_capucinus
ENSTRUG00000007303	ercc2	99	84.094	ENSCANG00000040683	ERCC2	99	84.094	Colobus_angolensis_palliatus
ENSTRUG00000007303	ercc2	98	91.128	ENSCSEG00000006041	ercc2	100	91.128	Cynoglossus_semilaevis
ENSTRUG00000007303	ercc2	99	81.765	ENSEASG00005013856	ERCC2	99	81.765	Equus_asinus_asinus
ENSTRUG00000007303	ercc2	98	91.867	ENSELUG00000018055	ercc2	99	91.867	Esox_lucius
ENSTRUG00000007303	ercc2	99	84.536	ENSFCAG00000002679	ERCC2	99	84.536	Felis_catus
ENSTRUG00000007303	ercc2	99	94.559	ENSFHEG00000000072	ercc2	99	94.559	Fundulus_heteroclitus
ENSTRUG00000007303	ercc2	99	84.123	ENSGAGG00000009493	ERCC2	99	84.123	Gopherus_agassizii
ENSTRUG00000007303	ercc2	99	84.094	ENSGGOG00000015842	ERCC2	99	84.094	Gorilla_gorilla
ENSTRUG00000007303	ercc2	98	94.311	ENSHBUG00000002187	ercc2	100	94.311	Haplochromis_burtoni
ENSTRUG00000007303	ercc2	99	96.029	ENSLBEG00000010573	ercc2	92	96.029	Labrus_bergylta
ENSTRUG00000007303	ercc2	99	84.094	ENSMFAG00000037898	ERCC2	99	84.094	Macaca_fascicularis
ENSTRUG00000007303	ercc2	99	84.094	ENSMMUG00000014419	ERCC2	99	84.094	Macaca_mulatta
ENSTRUG00000007303	ercc2	83	40.678	ENSMNEG00000040728	BRIP1	57	40.678	Macaca_nemestrina
ENSTRUG00000007303	ercc2	99	84.094	ENSMNEG00000042641	ERCC2	99	84.094	Macaca_nemestrina
ENSTRUG00000007303	ercc2	99	84.071	ENSMLEG00000043492	ERCC2	99	84.071	Mandrillus_leucophaeus
ENSTRUG00000007303	ercc2	100	94.714	ENSMAMG00000016724	ercc2	100	94.714	Mastacembelus_armatus
ENSTRUG00000007303	ercc2	98	95.188	ENSMZEG00005024441	ercc2	100	95.188	Maylandia_zebra
ENSTRUG00000007303	ercc2	99	83.800	ENSMICG00000000635	ERCC2	99	83.800	Microcebus_murinus
ENSTRUG00000007303	ercc2	100	91.777	ENSMMOG00000005162	ercc2	100	91.777	Mola_mola
ENSTRUG00000007303	ercc2	100	93.979	ENSMALG00000005990	ercc2	100	93.979	Monopterus_albus
ENSTRUG00000007303	ercc2	99	84.536	MGP_CAROLIEiJ_G0029287	Ercc2	99	84.536	Mus_caroli
ENSTRUG00000007303	ercc2	99	84.536	ENSMUSG00000030400	Ercc2	99	84.536	Mus_musculus
ENSTRUG00000007303	ercc2	99	84.536	MGP_PahariEiJ_G0021147	Ercc2	99	84.536	Mus_pahari
ENSTRUG00000007303	ercc2	99	84.389	MGP_SPRETEiJ_G0030371	Ercc2	99	84.389	Mus_spretus
ENSTRUG00000007303	ercc2	99	84.094	ENSPPAG00000044005	ERCC2	99	84.094	Pan_paniscus
ENSTRUG00000007303	ercc2	99	80.588	ENSPPRG00000000507	ERCC2	99	80.735	Panthera_pardus
ENSTRUG00000007303	ercc2	99	84.094	ENSPTRG00000011149	ERCC2	99	84.094	Pan_troglodytes
ENSTRUG00000007303	ercc2	99	84.071	ENSPANG00000032195	ERCC2	99	84.071	Papio_anubis
ENSTRUG00000007303	ercc2	99	88.954	ENSPKIG00000006883	ercc2	98	88.954	Paramormyrops_kingsleyae
ENSTRUG00000007303	ercc2	98	93.233	ENSPMGG00000000223	ercc2	100	93.233	Periophthalmus_magnuspinnatus
ENSTRUG00000007303	ercc2	99	94.412	ENSPLAG00000002626	ercc2	99	94.412	Poecilia_latipinna
ENSTRUG00000007303	ercc2	99	94.412	ENSPMEG00000002858	ercc2	99	94.412	Poecilia_mexicana
ENSTRUG00000007303	ercc2	99	89.706	ENSPREG00000019280	ercc2	99	89.706	Poecilia_reticulata
ENSTRUG00000007303	ercc2	98	94.453	ENSPNYG00000022007	ercc2	100	94.453	Pundamilia_nyererei
ENSTRUG00000007303	ercc2	98	92.169	ENSPNAG00000010434	ercc2	99	92.169	Pygocentrus_nattereri
ENSTRUG00000007303	ercc2	99	84.094	ENSRROG00000040423	ERCC2	99	84.094	Rhinopithecus_roxellana
ENSTRUG00000007303	ercc2	99	83.971	ENSSBOG00000030257	ERCC2	99	83.971	Saimiri_boliviensis_boliviensis
ENSTRUG00000007303	ercc2	98	88.955	ENSSMAG00000019720	ercc2	100	88.955	Scophthalmus_maximus
ENSTRUG00000007303	ercc2	98	95.338	ENSSDUG00000002397	ercc2	100	95.338	Seriola_dumerili
ENSTRUG00000007303	ercc2	98	95.188	ENSSLDG00000020353	ercc2	100	95.188	Seriola_lalandi_dorsalis
ENSTRUG00000007303	ercc2	100	96.035	ENSSPAG00000002074	ercc2	100	96.035	Stegastes_partitus
ENSTRUG00000007303	ercc2	99	84.559	ENSUAMG00000019562	ERCC2	99	84.559	Ursus_americanus
ENSTRUG00000007303	ercc2	99	89.706	ENSXMAG00000003922	ercc2	99	89.706	Xiphophorus_maculatus